Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa004181 Carpinus fangiana HOM05D007580 ORTHO05D009620 2.1e-89 332.4 173 100.0
Haze_15227 Corylus avellana HOM05D007580 ORTHO05D009620 6.6e-88 327.4 173 96.0
QL08p050656 Quercus lobata HOM05D007580 ORTHO05D009620 2.1e-54 216.1 188 66.0
Sabra14G0055200 Salix brachista HOM05D007580 ORTHO05D009620 2.1e-49 199.5 169 65.7
CiPaw.01G052900 Carya illinoinensis HOM05D007580 ORTHO05D009620 1.8e-48 196.4 165 69.7
Potri.002G153000 Populus trichocarpa HOM05D007580 ORTHO05D009620 8.7e-48 194.1 173 65.3
Sabra02G0121300 Salix brachista HOM05D007580 ORTHO05D009620 1.3e-46 190.3 176 63.6
Prupe.2G154500 Prunus persica HOM05D007580 ORTHO05D009620 2.0e-44 183.0 165 62.4
Potri.014G077000 Populus trichocarpa HOM05D007580 ORTHO05D009620 7.7e-44 181.0 164 62.2
COL.COLO4_12626 Corchorus olitorius HOM05D007580 ORTHO05D009620 2.5e-42 176.0 172 59.9
Gohir.A08G129400 Gossypium hirsutum HOM05D007580 ORTHO05D009620 3.2e-42 175.6 171 61.4
Lalb_Chr01g0021151 Lupinus albus HOM05D007580 ORTHO05D009620 3.2e-42 175.6 167 61.7
RcHm_v2.0_Chr1g0352211 Rosa chinensis HOM05D007580 ORTHO05D009620 3.2e-42 175.6 164 64.0
CiPaw.01G053500 Carya illinoinensis HOM05D007580 ORTHO05D009620 5.5e-42 174.9 158 64.6
CANSAT56G4452 Cannabis sativa HOM05D007580 ORTHO05D009620 2.1e-41 172.9 168 58.3
FAN06G3292 Fragaria x ananassa HOM05D007580 ORTHO05D009620 2.1e-41 172.9 164 61.6
FAN06G5062 Fragaria x ananassa HOM05D007580 ORTHO05D009620 2.1e-41 172.9 164 61.6
Duzib133G0099 Durio zibethinus HOM05D007580 ORTHO05D009620 3.6e-41 172.2 174 59.8
FAN10G2444 Fragaria x ananassa HOM05D007580 ORTHO05D009620 4.6e-41 171.8 164 61.0
Gorai.004G156400 Gossypium raimondii HOM05D007580 ORTHO05D009620 7.9e-41 171.0 163 62.0
Manes.01G262404 Manihot esculenta HOM05D007580 ORTHO05D009620 7.9e-41 171.0 172 60.5
FAN03G2022 Fragaria x ananassa HOM05D007580 ORTHO05D009620 1.0e-40 170.6 166 61.4
Duzib138G0841 Durio zibethinus HOM05D007580 ORTHO05D009620 2.3e-40 169.5 168 58.9
Manes.05G040200 Manihot esculenta HOM05D007580 ORTHO05D009620 2.3e-40 169.5 160 62.5
ClCG06G000100 Citrullus lanatus HOM05D007580 ORTHO05D009620 3.0e-40 169.1 185 57.3
Gohir.D08G150700 Gossypium hirsutum HOM05D007580 ORTHO05D009620 6.7e-40 167.9 163 61.3
Thecc.01G368700 Theobroma cacao HOM05D007580 ORTHO05D009620 6.7e-40 167.9 173 58.4
FAN01G0874 Fragaria x ananassa HOM05D007580 ORTHO05D009620 1.1e-39 167.2 166 59.6
MELO3C022528.2 Cucumis melo HOM05D007580 ORTHO05D009620 5.7e-39 164.9 181 56.9
Medtr7g076270 Medicago truncatula HOM05D007580 ORTHO05D009620 5.7e-39 164.9 174 57.5
TWI14G1086 Tripterygium wilfordii HOM05D007580 ORTHO05D009620 5.7e-39 164.9 161 62.7
MD07G1128600 Malus domestica HOM05D007580 ORTHO05D009620 9.7e-39 164.1 163 58.3
Ciclev10023708m.g Citrus clementina HOM05D007580 ORTHO05D009620 1.7e-38 163.3 163 57.7
CsaV3_6G005830 Cucumis sativus L. HOM05D007580 ORTHO05D009620 2.2e-38 162.9 185 55.7
TPR.G37829 Trifolium pratense HOM05D007580 ORTHO05D009620 3.7e-38 162.2 171 55.6
Hma1.2p1_0398F.1_g143830 Hydrangea macrophylla HOM05D007580 ORTHO05D009620 6.5e-35 151.4 187 51.3
Glyma.18G227800 Glycine max HOM05D007580 ORTHO05D009620 6.1e-33 144.8 173 52.6
PGSC0003DMG400017056 Solanum tuberosum HOM05D007580 ORTHO05D009620 6.1e-33 144.8 180 52.8
Oeu024417.1 Olea europaea HOM05D007580 ORTHO05D009620 3.0e-32 142.5 181 50.3
TAR003G0002 Trochodendron aralioides HOM05D007580 ORTHO05D009620 6.7e-32 141.4 173 49.7
Sed0005443 Sechium edule HOM05D007580 ORTHO05D009620 8.8e-32 141.0 170 52.4
TAR656G0002 Trochodendron aralioides HOM05D007580 ORTHO05D009620 2.6e-31 139.4 173 49.1
Solyc01g091790.2 Solanum lycopersicum HOM05D007580 ORTHO05D009620 4.4e-31 138.7 180 50.6
Psat0s1132g0080 Pisum sativum HOM05D007580 ORTHO05D009620 7.4e-31 137.9 181 50.3
Sopen01g037570 Solanum pennellii HOM05D007580 ORTHO05D009620 9.7e-31 137.5 177 50.8
Nitab4.5_0004550g0100 Nicotiana tabacum HOM05D007580 ORTHO05D009620 4.8e-30 135.2 190 47.9
TAR375G0300 Trochodendron aralioides HOM05D007580 ORTHO05D009620 1.4e-29 133.7 173 49.1
VMungo1383G0280 Vigna mungo HOM05D007580 ORTHO05D009620 1.8e-29 133.3 174 47.7
Migut.B01687 Erythranthe guttata HOM05D007580 ORTHO05D009620 3.1e-29 132.5 186 47.8
Aqoxy7G00453 Aquilegia oxysepala HOM05D007580 ORTHO05D009620 5.3e-29 131.7 173 47.4
CARHR000490 Cardamine hirsuta HOM05D007580 ORTHO05D009620 2.2e-27 126.3 170 49.4
GSVIVG01027528001 Vitis vinifera HOM05D007580 ORTHO05D009620 5.0e-27 125.2 170 51.8
Nn1g01349 Nelumbo nucifera HOM05D007580 ORTHO05D009620 1.9e-26 123.2 173 45.1
Cpa.g.sc18.198 Carica papaya HOM05D007580 ORTHO05D009620 3.2e-26 122.5 147 55.1
Ca_07865_v3 Cicer arietinum L. HOM05D007580 ORTHO05D009620 4.2e-26 122.1 168 45.8
Nitab4.5_0010430g0050 Nicotiana tabacum HOM05D007580 ORTHO05D009620 6.7e-24 114.8 171 45.0
PGR031G3829 Punica granatum HOM05D007580 ORTHO05D009620 6.7e-24 114.8 168 46.4
DCAR_006906 Daucus carota HOM05D007580 ORTHO05D009620 8.8e-24 114.4 166 45.8
Rhsim01G0155700 Rhododendron simsii HOM05D007580 ORTHO05D009620 1.1e-23 114.0 173 46.8
Thhalv10009990m.g Eutrema salsugineum HOM05D007580 ORTHO05D009620 1.5e-23 113.6 170 47.1
BolC5t28812H Brassica oleracea HOM05D007580 ORTHO05D009620 2.6e-23 112.8 174 47.1
Phvul.008G070400 Phaseolus vulgaris HOM05D007580 ORTHO05D009620 3.3e-23 112.5 153 47.7
BraA10t42299Z Brassica rapa HOM05D007580 ORTHO05D009620 5.7e-23 111.7 165 47.3
Actinidia33444 Actinidia chinensis HOM05D007580 ORTHO05D009620 9.7e-23 110.9 163 43.6
BcaB03g13622 Brassica carinata HOM05D007580 ORTHO05D009620 9.7e-23 110.9 165 47.3
CSS0034624 Camellia sinensis var. sinensis HOM05D007580 ORTHO05D009620 1.7e-22 110.2 175 45.7
A10p00190 Brassica napus HOM05D007580 ORTHO05D009620 2.2e-22 109.8 165 46.7
Sc23g0003300 Simmondsia chinensis HOM05D007580 ORTHO05D009620 4.8e-22 108.6 163 47.2
AL1G10480 Arabidopsis lyrata HOM05D007580 ORTHO05D009620 5.3e-21 105.1 170 47.6
Aa31LG1G11200 Aethionema arabicum HOM05D007580 ORTHO05D009620 1.6e-20 103.6 167 44.3
Carub.0001s0037 Capsella rubella HOM05D007580 ORTHO05D009620 1.6e-20 103.6 165 44.2
Peaxi162Scf00021g00055 Petunia axillaris HOM05D007580 ORTHO05D009620 1.6e-20 103.6 167 44.3
AT1G01840 Arabidopsis thaliana HOM05D007580 ORTHO05D009620 2.0e-20 103.2 171 45.0
Sp1g00440 Schrenkiella parvula HOM05D007580 ORTHO05D009620 2.0e-20 103.2 170 42.9
THA.LOC104814091 Tarenaya hassleriana HOM05D007580 ORTHO05D009620 1.7e-19 100.1 174 45.4
Lsat_1_v5_gn_7_8361 Lactuca sativa HOM05D007580 ORTHO05D009620 2.2e-19 99.8 168 41.7
Lj1g0023268 Lotus japonicus HOM05D007580 ORTHO05D009620 2.9e-19 99.4 175 42.3
Glyma.09G264200 Glycine max HOM05D007580 ORTHO05D009620 2.1e-17 93.2 101 52.5
C05p00230 Brassica napus HOM05D007580 ORTHO05D009620 3.6e-17 92.4 172 42.4
PSO478G4117 Papaver somniferum HOM05D007580 ORTHO05D009620 6.1e-17 91.7 193 38.9
PSO782G0900 Papaver somniferum HOM05D007580 ORTHO05D009620 4.0e-16 89.0 189 39.7
PSO782G1514 Papaver somniferum HOM05D007580 ORTHO05D009620 5.2e-16 88.6 190 38.9
Lsat_1_v5_gn_7_8421 Lactuca sativa HOM05D007580 ORTHO05D009620 2.0e-15 86.7 170 40.6
ECA236G4638 Erigeron canadensis HOM05D007580 ORTHO05D009620 4.8e-14 82.0 167 39.5
MBI12_g45243_MAGBIO Magnolia biondii HOM05D007580 ORTHO05D009620 4.8e-14 82.0 169 41.4
MBI12_g06406_MAGBIO Magnolia biondii HOM05D007580 ORTHO05D009620 1.4e-13 80.5 169 41.4
HanXRQChr04g0121781 Helianthus annuus HOM05D007580 ORTHO05D009620 9.1e-13 77.8 163 39.3
vmacro20972 Vaccinium macrocarpon HOM05D007580 ORTHO05D009620 1.3e-11 73.9 109 47.7
Ah.05g176020 Amaranthus hybridus HOM05D007580 ORTHO05D009620 3.8e-11 72.4 162 37.7
SalBow3G0911 Salvia bowleyana HOM05D007580 ORTHO05D009620 8.5e-11 71.2 167 37.7
AUR62026657 Chenopodium quinoa HOM05D007580 ORTHO05D009620 4.2e-10 68.9 145 44.1
SGA_v2.0_scaffold95G28871 Striga asiatica HOM05D007580 ORTHO05D009620 7.2e-10 68.2 179 39.1
AUR62033366 Chenopodium quinoa HOM05D007580 ORTHO05D009620 2.1e-09 66.6 106 50.9
FAN10G0406 Fragaria x ananassa HOM05D007580 ORTHO05D009620 1.0e-08 64.3 86 53.5


User provided reference genes

Program Settings