Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa004113 Carpinus fangiana HOM05D007381 ORTHO05D009496 7.2e-178 627.1 310 100.0
Haze_15300 Corylus avellana HOM05D007381 ORTHO05D009496 2.3e-168 595.5 316 94.6
MELO3C007622.2 Cucumis melo HOM05D007381 ORTHO05D009496 1.9e-138 496.1 305 81.0
Prupe.6G222900 Prunus persica HOM05D007381 ORTHO05D009496 2.1e-137 492.7 305 81.0
Sed0015462 Sechium edule HOM05D007381 ORTHO05D009496 2.8e-137 492.3 305 80.7
CsaV3_6G043990 Cucumis sativus L. HOM05D007381 ORTHO05D009496 2.4e-136 489.2 305 80.3
MD00G1015500 Malus domestica HOM05D007381 ORTHO05D009496 2.4e-136 489.2 305 80.3
MD15G1294900 Malus domestica HOM05D007381 ORTHO05D009496 2.4e-136 489.2 305 80.7
VMungo1215G2498 Vigna mungo HOM05D007381 ORTHO05D009496 2.0e-135 486.1 284 84.5
Glyma.11G048900 Glycine max HOM05D007381 ORTHO05D009496 2.6e-135 485.7 284 84.5
Dinv30077 Davidia involucrata HOM05D007381 ORTHO05D009496 7.6e-135 484.2 306 80.4
TAR628G1049 Trochodendron aralioides HOM05D007381 ORTHO05D009496 1.7e-134 483.0 306 78.8
Glyma.01G192900 Glycine max HOM05D007381 ORTHO05D009496 2.2e-134 482.6 284 83.5
Phvul.002G012100 Phaseolus vulgaris HOM05D007381 ORTHO05D009496 2.9e-134 482.3 284 84.2
arahy.Tifrunner.gnm1.ann1.S5EEEI Arachis hypogaea HOM05D007381 ORTHO05D009496 3.8e-134 481.9 284 82.7
Dinv26914 Davidia involucrata HOM05D007381 ORTHO05D009496 1.4e-133 479.9 274 85.4
Lj2g0010288 Lotus japonicus HOM05D007381 ORTHO05D009496 5.4e-133 478.0 284 82.7
RcHm_v2.0_Chr2g0107591 Rosa chinensis HOM05D007381 ORTHO05D009496 5.4e-133 478.0 305 77.7
Ca_24708_v3 Cicer arietinum L. HOM05D007381 ORTHO05D009496 7.1e-133 477.6 284 81.7
arahy.Tifrunner.gnm1.ann1.I4PWFV Arachis hypogaea HOM05D007381 ORTHO05D009496 9.3e-133 477.2 284 82.0
Lalb_Chr05g0213621 Lupinus albus HOM05D007381 ORTHO05D009496 1.6e-132 476.5 284 82.0
Medtr5g015840 Medicago truncatula HOM05D007381 ORTHO05D009496 2.7e-132 475.7 284 82.4
TPR.G20964 Trifolium pratense HOM05D007381 ORTHO05D009496 4.6e-132 474.9 295 78.6
CANSAT01G2210 Cannabis sativa HOM05D007381 ORTHO05D009496 7.8e-132 474.2 305 78.7
FvH4_1g17400 Fragaria vesca HOM05D007381 ORTHO05D009496 7.8e-132 474.2 305 77.0
FAN19G2977 Fragaria x ananassa HOM05D007381 ORTHO05D009496 1.7e-131 473.0 273 82.8
GSVIVG01000134001 Vitis vinifera HOM05D007381 ORTHO05D009496 5.1e-131 471.5 285 82.1
FAN23G1987 Fragaria x ananassa HOM05D007381 ORTHO05D009496 6.6e-131 471.1 305 76.4
PSO170G6067 Papaver somniferum HOM05D007381 ORTHO05D009496 6.6e-131 471.1 306 76.5
Gorai.011G107900 Gossypium raimondii HOM05D007381 ORTHO05D009496 1.1e-130 470.3 285 80.4
COL.COLO4_11553 Corchorus olitorius HOM05D007381 ORTHO05D009496 2.5e-130 469.2 285 80.7
Eucgr.H02297 Eucalyptus grandis HOM05D007381 ORTHO05D009496 2.5e-130 469.2 285 81.4
Gohir.A10G089900 Gossypium hirsutum HOM05D007381 ORTHO05D009496 2.5e-130 469.2 285 80.0
PGR102G2572 Punica granatum HOM05D007381 ORTHO05D009496 3.3e-130 468.8 285 81.8
Atru.chr3.157 Acer truncatum HOM05D007381 ORTHO05D009496 4.3e-130 468.4 285 80.4
Atru.chr3.186 Acer truncatum HOM05D007381 ORTHO05D009496 4.3e-130 468.4 285 80.4
FAN28G2520 Fragaria x ananassa HOM05D007381 ORTHO05D009496 4.3e-130 468.4 273 81.7
Gohir.D10G098200 Gossypium hirsutum HOM05D007381 ORTHO05D009496 4.3e-130 468.4 285 80.0
FAN26G1164 Fragaria x ananassa HOM05D007381 ORTHO05D009496 9.6e-130 467.2 273 81.7
Cpa.g.sc6.38 Carica papaya HOM05D007381 ORTHO05D009496 2.1e-129 466.1 285 81.8
ECA232G2614 Erigeron canadensis HOM05D007381 ORTHO05D009496 3.6e-129 465.3 285 79.3
CSS0037700 Camellia sinensis var. sinensis HOM05D007381 ORTHO05D009496 4.8e-129 464.9 274 83.6
Thecc.01G070300 Theobroma cacao HOM05D007381 ORTHO05D009496 6.2e-129 464.5 285 79.6
CSS0029250 Camellia sinensis var. sinensis HOM05D007381 ORTHO05D009496 8.1e-129 464.2 274 83.2
HanXRQChr12g0373171 Helianthus annuus HOM05D007381 ORTHO05D009496 8.1e-129 464.2 306 74.5
Aqoxy5G00892 Aquilegia oxysepala HOM05D007381 ORTHO05D009496 3.1e-128 462.2 306 74.8
Nn1g04598 Nelumbo nucifera HOM05D007381 ORTHO05D009496 3.1e-128 462.2 306 76.1
Actinidia16435 Actinidia chinensis HOM05D007381 ORTHO05D009496 2.6e-127 459.1 285 80.7
Lsat_1_v5_gn_4_160940 Lactuca sativa HOM05D007381 ORTHO05D009496 2.6e-127 459.1 306 73.9
Rhsim08G0094800 Rhododendron simsii HOM05D007381 ORTHO05D009496 2.6e-127 459.1 285 79.6
Lalb_Chr16g0378811 Lupinus albus HOM05D007381 ORTHO05D009496 4.5e-127 458.4 284 78.9
SGA_v2.0_scaffold15G07431 Striga asiatica HOM05D007381 ORTHO05D009496 5.8e-127 458.0 326 68.1
ClCG01G017450 Citrullus lanatus HOM05D007381 ORTHO05D009496 7.6e-127 457.6 389 63.8
Cc07_g06930 Coffea canephora HOM05D007381 ORTHO05D009496 7.6e-127 457.6 285 77.5
Potri.007G053900 Populus trichocarpa HOM05D007381 ORTHO05D009496 3.8e-126 455.3 306 74.5
Manes.12G110400 Manihot esculenta HOM05D007381 ORTHO05D009496 1.4e-125 453.4 305 74.1
THA.LOC104819874 Tarenaya hassleriana HOM05D007381 ORTHO05D009496 1.2e-124 450.3 285 77.5
Lj4A160G63 Lonicera japonica HOM05D007381 ORTHO05D009496 1.8e-123 446.4 303 72.9
Migut.H00360 Erythranthe guttata HOM05D007381 ORTHO05D009496 3.9e-123 445.3 306 71.9
EL10Ac6g15638 Beta vulgaris HOM05D007381 ORTHO05D009496 5.1e-123 444.9 306 70.6
Peaxi162Scf00264g00118 Petunia axillaris HOM05D007381 ORTHO05D009496 6.7e-123 444.5 306 72.2
Os07g0588800 Oryza sativa ssp. japonica HOM05D007381 ORTHO05D009496 3.7e-121 438.7 274 76.3
Sabra07G0047100 Salix brachista HOM05D007381 ORTHO05D009496 3.7e-121 438.7 290 74.5
Zm00001eb108230 Zea mays HOM05D007381 ORTHO05D009496 3.7e-121 438.7 274 76.3
Ciclev10025991m.g Citrus clementina HOM05D007381 ORTHO05D009496 6.2e-121 438.0 266 80.8
Aa31LG6G14440 Aethionema arabicum HOM05D007381 ORTHO05D009496 1.1e-120 437.2 274 75.9
SEGI_03968 Sequoiadendron giganteum HOM05D007381 ORTHO05D009496 1.4e-120 436.8 285 73.7
PGSC0003DMG400024934 Solanum tuberosum HOM05D007381 ORTHO05D009496 5.3e-120 434.9 306 70.6
Sopen02g037070 Solanum pennellii HOM05D007381 ORTHO05D009496 6.9e-120 434.5 306 70.6
CDE07G0114 Ceratophyllum demersum HOM05D007381 ORTHO05D009496 2.6e-119 432.6 285 72.3
ATR0019G019 Amborella trichopoda HOM05D007381 ORTHO05D009496 4.5e-119 431.8 285 73.0
vmacro17999 Vaccinium macrocarpon HOM05D007381 ORTHO05D009496 7.6e-119 431.0 348 64.9
Solyc02g092510.3 Solanum lycopersicum HOM05D007381 ORTHO05D009496 4.9e-118 428.3 306 69.6
CAN.G1075.23 Capsicum annuum HOM05D007381 ORTHO05D009496 1.9e-117 426.4 306 69.6
Nitab4.5_0000651g0120 Nicotiana tabacum HOM05D007381 ORTHO05D009496 9.3e-117 424.1 301 69.1
Nitab4.5_0006069g0020 Nicotiana tabacum HOM05D007381 ORTHO05D009496 2.3e-115 419.5 304 67.8
Oeu040581.2 Olea europaea HOM05D007381 ORTHO05D009496 1.8e-112 409.8 370 58.9
unitig_899.g14582 Utricularia gibba HOM05D007381 ORTHO05D009496 1.5e-111 406.8 274 70.4
TWI73G0080 Tripterygium wilfordii HOM05D007381 ORTHO05D009496 7.9e-108 394.4 306 67.6
Pp3c18_1320 Physcomitrium patens HOM05D007381 ORTHO05D009496 3.3e-106 389.0 274 68.2
CiPaw.01G006100 Carya illinoinensis HOM05D007381 ORTHO05D009496 3.7e-105 385.6 221 86.0
SMO268G0024 Selaginella moellendorffii HOM05D007381 ORTHO05D009496 9.0e-104 380.9 271 67.5
DCAR_021466 Daucus carota HOM05D007381 ORTHO05D009496 7.6e-103 377.9 285 67.0
AagrBONN_evm.TU.Sc2ySwM_362.1621 Anthoceros agrestis HOM05D007381 ORTHO05D009496 1.4e-101 373.6 271 65.3
Hma1.2p1_0730F.1_g209840 Hydrangea macrophylla HOM05D007381 ORTHO05D009496 1.2e-95 354.0 235 77.4
Mapoly0084s0082 Marchantia polymorpha HOM05D007381 ORTHO05D009496 9.4e-93 344.4 272 59.9
Duzib187G0033 Durio zibethinus HOM05D007381 ORTHO05D009496 2.2e-86 323.2 285 60.7
SEGI_30700 Sequoiadendron giganteum HOM05D007381 ORTHO05D009496 1.9e-85 320.1 214 72.9
Hund13939 Selenicereus undatus HOM05D007381 ORTHO05D009496 2.6e-79 299.7 239 64.4
HPP92_026572 Vanilla planifolia HOM05D007381 ORTHO05D009496 4.7e-76 288.9 188 72.3
Cre07.g344150 Chlamydomonas reinhardtii HOM05D007381 ORTHO05D009496 2.8e-73 279.6 273 51.3
QL06p039803 Quercus lobata HOM05D007381 ORTHO05D009496 5.4e-64 248.8 134 87.3
CSS0032842 Camellia sinensis var. sinensis HOM05D007381 ORTHO05D009496 3.5e-55 219.5 168 68.5
MCO12G353 Micromonas commoda HOM05D007381 ORTHO05D009496 3.5e-55 219.5 282 43.6
PRCOL_00002255 Prasinoderma coloniale HOM05D007381 ORTHO05D009496 8.0e-52 208.4 234 46.6
CBR_g40647 Chara braunii HOM05D007381 ORTHO05D009496 2.3e-46 190.3 525 27.2
ATR0019G012 Amborella trichopoda HOM05D007381 ORTHO05D009496 4.4e-42 176.0 108 75.9
Ca_17124_v3 Cicer arietinum L. HOM05D002459 ORTHO05D003006 2.9e-25 120.2 85 71.8
Cfa025505 Carpinus fangiana HOM05D007381 ORTHO05D009496 1.0e-22 111.7 221 32.6
SHI33146 Sapria himalayana HOM05D007381 ORTHO05D009496 2.5e-21 107.1 70 65.7
Ca_08895_v3 Cicer arietinum L. HOM05D002459 ORTHO05D003006 2.1e-20 104.0 69 72.5
CBR_g29716 Chara braunii HOM05D007381 ORTHO05D009496 4.0e-19 99.8 95 47.4
COL.COLO4_34115 Corchorus olitorius HOM05D007381 ORTHO05D159467 6.4e-09 65.9 39 79.5
Rhsim08G0136300 Rhododendron simsii HOM05D007381 ORTHO05D006450 7.9e-07 58.9 53 62.3


User provided reference genes

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