Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa004078 Carpinus fangiana HOM05D003477 ORTHO05D004043 1.1e-42 176.4 98 100.0
Haze_15335 Corylus avellana HOM05D003477 ORTHO05D004043 2.0e-33 145.6 86 95.3
CiPaw.01G009400 Carya illinoinensis HOM05D003477 ORTHO05D004043 5.0e-24 114.4 98 70.4
Eucgr.H02262 Eucalyptus grandis HOM05D003477 ORTHO05D004043 2.7e-14 82.0 98 54.1
TAR625G0309 Trochodendron aralioides HOM05D003477 ORTHO05D004043 4.0e-13 78.2 99 55.6
Phvul.002G014500 Phaseolus vulgaris HOM05D003477 ORTHO05D004043 6.8e-13 77.4 101 56.4
Medtr5g016330 Medicago truncatula HOM05D003477 ORTHO05D004043 1.2e-12 76.6 95 54.7
Lj2g0006602 Lotus japonicus HOM05D003477 ORTHO05D004043 3.4e-12 75.1 98 58.2
Hund16371 Selenicereus undatus HOM05D003477 ORTHO05D004043 3.4e-12 75.1 100 53.0
Sed0009886 Sechium edule HOM05D003477 ORTHO05D004043 4.4e-12 74.7 99 54.5
SGA_v2.0_scaffold32G13034 Striga asiatica HOM05D003477 ORTHO05D004043 5.7e-12 74.3 92 52.2
Psat2g169360 Pisum sativum HOM05D003477 ORTHO05D004043 7.5e-12 73.9 98 53.1
QL06p040030 Quercus lobata HOM05D003477 ORTHO05D004043 7.5e-12 73.9 97 55.7
arahy.Tifrunner.gnm1.ann1.VE84TY Arachis hypogaea HOM05D003477 ORTHO05D004043 1.7e-11 72.8 97 50.5
Sc16g0001450 Simmondsia chinensis HOM05D003477 ORTHO05D004043 2.8e-11 72.0 102 50.0
CiPaw.05G013300 Carya illinoinensis HOM05D003477 ORTHO05D004043 3.7e-11 71.6 100 50.0
ClCG02G006540 Citrullus lanatus HOM05D003477 ORTHO05D004043 6.3e-11 70.9 99 49.5
Nn1g04659 Nelumbo nucifera HOM05D003477 ORTHO05D004043 8.3e-11 70.5 99 52.5
Sed0021400 Sechium edule HOM05D003477 ORTHO05D004043 1.1e-10 70.1 102 50.0
TAR381G0852 Trochodendron aralioides HOM05D003477 ORTHO05D004043 1.1e-10 70.1 99 52.5
MELO3C018498.2 Cucumis melo HOM05D003477 ORTHO05D004043 1.4e-10 69.7 98 50.0
Prupe.6G226300 Prunus persica HOM05D003477 ORTHO05D004043 1.4e-10 69.7 100 53.0
PSO210G4486 Papaver somniferum HOM05D003477 ORTHO05D004043 1.8e-10 69.3 99 52.5
TAR376G0403 Trochodendron aralioides HOM05D003477 ORTHO05D004043 1.8e-10 69.3 97 51.5
MD02G1179900 Malus domestica HOM05D003477 ORTHO05D004043 2.4e-10 68.9 101 53.5
CAN.G606.19 Capsicum annuum HOM05D003477 ORTHO05D004043 4.1e-10 68.2 99 50.5
AUR62003947 Chenopodium quinoa HOM05D003477 ORTHO05D004043 4.1e-10 68.2 98 53.1
FvH4_1g16960 Fragaria vesca HOM05D003477 ORTHO05D004043 4.1e-10 68.2 102 49.0
ECA238G3264 Erigeron canadensis HOM05D003477 ORTHO05D004043 5.4e-10 67.8 100 47.0
arahy.Tifrunner.gnm1.ann1.T63M72 Arachis hypogaea HOM05D003477 ORTHO05D004043 7.0e-10 67.4 95 49.5
CSS0020585 Camellia sinensis var. sinensis HOM05D003477 ORTHO05D004043 7.0e-10 67.4 99 50.5
CsaV3_7G008070 Cucumis sativus L. HOM05D010572 ORTHO05D012753 7.0e-10 67.4 98 50.0
FAN28G0243 Fragaria x ananassa HOM05D003477 ORTHO05D004043 7.0e-10 67.4 99 49.5
Aqoxy6G02834 Aquilegia oxysepala HOM05D003477 ORTHO05D004043 9.1e-10 67.0 95 51.6
ClCG05G010360 Citrullus lanatus HOM05D003477 ORTHO05D004043 9.1e-10 67.0 96 50.0
Nn5g30458 Nelumbo nucifera HOM05D003477 ORTHO05D004043 9.1e-10 67.0 100 50.0
Dinv26882 Davidia involucrata HOM05D003477 ORTHO05D004043 1.2e-09 66.6 98 48.0
MBI04_g11440_MAGBIO Magnolia biondii HOM05D003477 ORTHO05D004043 1.2e-09 66.6 100 47.0
EL10Ac6g15680 Beta vulgaris HOM05D003477 ORTHO05D004043 1.6e-09 66.2 99 52.5
AUR62038261 Chenopodium quinoa HOM05D003477 ORTHO05D004043 1.6e-09 66.2 98 52.0
Prupe.8G137400 Prunus persica HOM05D003477 ORTHO05D004043 1.6e-09 66.2 98 52.0
Ca_24733_v3 Cicer arietinum L. HOM05D002634 ORTHO05D003100 2.0e-09 65.9 100 52.0
Glyma.01G190500 Glycine max HOM05D003477 ORTHO05D004043 2.0e-09 65.9 98 51.0
FAN23G2670 Fragaria x ananassa HOM05D003477 ORTHO05D004043 2.7e-09 65.5 95 48.4
Dinv15774 Davidia involucrata HOM05D003477 ORTHO05D004043 3.5e-09 65.1 94 48.9
FAN26G2600 Fragaria x ananassa HOM05D003477 ORTHO05D004043 3.5e-09 65.1 99 48.5
QL11p032673 Quercus lobata HOM05D003477 ORTHO05D004043 3.5e-09 65.1 98 52.0
CDE02G3617 Ceratophyllum demersum HOM05D003477 ORTHO05D004043 4.5e-09 64.7 96 46.9
SGA_v2.0_scaffold225G42992 Striga asiatica HOM05D003477 ORTHO05D004043 4.5e-09 64.7 94 45.7
CDE01G0745 Ceratophyllum demersum HOM05D003477 ORTHO05D004043 5.9e-09 64.3 92 47.8
MD10G1099700 Malus domestica HOM05D003477 ORTHO05D004043 5.9e-09 64.3 97 52.6
Sed0015852 Sechium edule HOM05D003477 ORTHO05D004043 5.9e-09 64.3 94 53.2
FAN19G2238 Fragaria x ananassa HOM05D003477 ORTHO05D004043 1.0e-08 63.5 99 47.5
Oeu013760.1 Olea europaea HOM05D003477 ORTHO05D004043 1.0e-08 63.5 92 48.9
RcHm_v2.0_Chr2g0107061 Rosa chinensis HOM05D003477 ORTHO05D004043 1.0e-08 63.5 99 48.5
Medtr1g107085 Medicago truncatula HOM05D003477 ORTHO05D004043 1.3e-08 63.2 100 48.0
Actinidia16453 Actinidia chinensis HOM05D003477 ORTHO05D004043 2.2e-08 62.4 100 47.0
Actinidia21247 Actinidia chinensis HOM05D003477 ORTHO05D004043 2.2e-08 62.4 100 47.0
arahy.Tifrunner.gnm1.ann1.K085P0 Arachis hypogaea HOM05D003477 ORTHO05D004043 2.2e-08 62.4 98 46.9
Migut.B00399 Erythranthe guttata HOM05D003477 ORTHO05D004043 2.2e-08 62.4 92 48.9
SalBow6G1705 Salvia bowleyana HOM05D003477 ORTHO05D004043 2.2e-08 62.4 94 50.0
Psat6g216680 Pisum sativum HOM05D003477 ORTHO05D004043 2.9e-08 62.0 100 46.0
Dinv42204 Davidia involucrata HOM05D003477 ORTHO05D004043 3.8e-08 61.6 91 49.5
Lsat_1_v5_gn_2_85381 Lactuca sativa HOM05D003477 ORTHO05D004043 3.8e-08 61.6 100 51.0
PGSC0003DMG400025859 Solanum tuberosum HOM05D003477 ORTHO05D004043 5.0e-08 61.2 94 44.7
DCAR_029094 Daucus carota HOM05D003477 ORTHO05D004043 6.5e-08 60.8 92 47.8
Sp7g32050 Schrenkiella parvula HOM05D003477 ORTHO05D004043 6.5e-08 60.8 46 63.0
Atru.chr3.235 Acer truncatum HOM05D003477 ORTHO05D004043 8.5e-08 60.5 96 46.9
Cc07_g06600 Coffea canephora HOM05D003477 ORTHO05D004043 8.5e-08 60.5 98 48.0
Ca_11060_v3 Cicer arietinum L. HOM05D003477 ORTHO05D004043 1.1e-07 60.1 99 44.4
ECA240G1244 Erigeron canadensis HOM05D003477 ORTHO05D004043 1.1e-07 60.1 91 47.3
Lalb_Chr05g0226121 Lupinus albus HOM05D003477 ORTHO05D004043 1.1e-07 60.1 98 46.9
Solyc01g107450.4 Solanum lycopersicum HOM05D003477 ORTHO05D004043 1.1e-07 60.1 93 46.2
FAN15G1392 Fragaria x ananassa HOM05D003477 ORTHO05D004043 1.9e-07 59.3 98 52.0
RcHm_v2.0_Chr6g0254531 Rosa chinensis HOM05D003477 ORTHO05D004043 1.9e-07 59.3 99 55.6
Sopen01g049690 Solanum pennellii HOM05D003477 ORTHO05D004043 1.9e-07 59.3 93 44.1
arahy.Tifrunner.gnm1.ann1.S3TCSS Arachis hypogaea HOM05D003477 ORTHO05D004043 3.2e-07 58.5 98 45.9
FAN27G0803 Fragaria x ananassa HOM05D003477 ORTHO05D004043 3.2e-07 58.5 98 52.0
FvH4_2g04800 Fragaria vesca HOM05D003477 ORTHO05D004043 4.2e-07 58.2 98 53.1
SalBow3G1026 Salvia bowleyana HOM05D003477 ORTHO05D004043 4.2e-07 58.2 93 48.4
TWI79G1417 Tripterygium wilfordii HOM05D003477 ORTHO05D004043 4.2e-07 58.2 100 48.0
AT4G34265 Arabidopsis thaliana HOM05D003477 ORTHO05D004043 5.5e-07 57.8 48 60.4
Thhalv10026653m.g Eutrema salsugineum HOM05D003477 ORTHO05D004043 5.5e-07 57.8 48 60.4
Haze_10200 Corylus avellana HOM05D003477 ORTHO05D004043 7.2e-07 57.4 101 47.5
Carub.0003s2895 Capsella rubella HOM05D003477 ORTHO05D004043 1.2e-06 56.6 99 42.4
Cc02_g19410 Coffea canephora HOM05D003477 ORTHO05D004043 1.2e-06 56.6 95 44.2
TWI31G0442 Tripterygium wilfordii HOM05D003477 ORTHO05D004043 1.2e-06 56.6 100 45.0
vmacro19455 Vaccinium macrocarpon HOM05D003477 ORTHO05D004043 1.2e-06 56.6 92 45.7
BcaNung04163 Brassica carinata HOM05D003477 ORTHO05D004043 1.6e-06 56.2 47 57.4
A01p04150 Brassica napus HOM05D003477 ORTHO05D004043 1.6e-06 56.2 47 57.4
BolC1t00438H Brassica oleracea HOM05D003477 ORTHO05D004043 1.6e-06 56.2 47 57.4
BraA01t00404Z Brassica rapa HOM05D003477 ORTHO05D004043 1.6e-06 56.2 47 57.4
Eucgr.I01090 Eucalyptus grandis HOM05D003477 ORTHO05D004043 1.6e-06 56.2 99 47.5
CANSAT25G3186 Cannabis sativa HOM05D003477 ORTHO05D004043 2.1e-06 55.8 98 50.0
AL7G17010 Arabidopsis lyrata HOM05D003477 ORTHO05D004043 2.7e-06 55.5 46 58.7
Duzib132G0501 Durio zibethinus HOM05D003477 ORTHO05D004043 2.7e-06 55.5 99 44.4
Gorai.008G021900 Gossypium raimondii HOM05D003477 ORTHO05D004043 2.7e-06 55.5 95 42.1
Manes.10G075200 Manihot esculenta HOM05D003477 ORTHO05D004043 2.7e-06 55.5 101 45.5
Oeu029533.3 Olea europaea HOM05D003477 ORTHO05D004043 2.7e-06 55.5 96 49.0
VMungo0720G2427 Vigna mungo HOM05D003477 ORTHO05D004043 2.7e-06 55.5 98 42.9
C01p04520 Brassica napus HOM05D003477 ORTHO05D004043 3.6e-06 55.1 47 55.3
CSS0007946 Camellia sinensis var. sinensis HOM05D003477 ORTHO05D004043 3.6e-06 55.1 93 47.3
CSS0046932 Camellia sinensis var. sinensis HOM05D003477 ORTHO05D004043 3.6e-06 55.1 93 47.3
Thecc.02G111100 Theobroma cacao HOM05D003477 ORTHO05D004043 3.6e-06 55.1 100 43.0
GSVIVG01037899001 Vitis vinifera HOM05D003477 ORTHO05D004043 3.6e-06 55.1 87 44.8
Duzib248G0529 Durio zibethinus HOM05D003477 ORTHO05D004043 4.7e-06 54.7 79 45.6
FAN20G0459 Fragaria x ananassa HOM05D003477 ORTHO05D004043 4.7e-06 54.7 98 50.0
Phvul.007G041500 Phaseolus vulgaris HOM05D003477 ORTHO05D004043 4.7e-06 54.7 97 41.2
Rhsim05G0089200 Rhododendron simsii HOM05D003477 ORTHO05D004043 4.7e-06 54.7 88 45.5
DCAR_001659 Daucus carota HOM05D003477 ORTHO05D004043 6.1e-06 54.3 92 45.7
FAN24G0602 Fragaria x ananassa HOM05D003477 ORTHO05D004043 6.1e-06 54.3 98 51.0
Sed0004332 Sechium edule HOM05D003477 ORTHO05D004043 6.1e-06 54.3 97 46.4
Solyc02g092830.4 Solanum lycopersicum HOM05D003477 ORTHO05D004043 6.1e-06 54.3 97 45.4
Sopen02g037390 Solanum pennellii HOM05D003477 ORTHO05D004043 6.1e-06 54.3 97 45.4
PGSC0003DMG400024979 Solanum tuberosum HOM05D003477 ORTHO05D004043 6.1e-06 54.3 97 45.4
Gorai.005G234400 Gossypium raimondii HOM05D003477 ORTHO05D004043 8.0e-06 53.9 98 44.9
HanXRQChr03g0068771 Helianthus annuus HOM05D003477 ORTHO05D004043 8.0e-06 53.9 91 44.0
PSO675G8803 Papaver somniferum HOM05D003477 ORTHO05D004043 8.0e-06 53.9 95 44.2


User provided reference genes

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