Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa004065 Carpinus fangiana HOM05D008343 ORTHO05D009841 1.5e-39 166.8 85 100.0
Haze_15346 Corylus avellana HOM05D008343 ORTHO05D009841 1.8e-24 116.7 63 92.1
QL06p040052 Quercus lobata HOM05D008343 ORTHO05D009841 3.1e-16 89.4 60 71.7
CiPaw.02G005800 Carya illinoinensis HOM05D008343 ORTHO05D009841 2.9e-14 82.8 61 67.2
Dinv30037 Davidia involucrata HOM05D008343 ORTHO05D009841 2.6e-10 69.7 58 60.3
Eucgr.H02229 Eucalyptus grandis HOM05D008343 ORTHO05D009841 7.4e-10 68.2 58 55.2
MD02G1179300 Malus domestica HOM05D008343 ORTHO05D009841 7.4e-10 68.2 61 63.9
Eucgr.H02234 Eucalyptus grandis HOM05D008343 ORTHO05D009841 9.7e-10 67.8 58 53.4
Eucgr.H02237 Eucalyptus grandis HOM05D008343 ORTHO05D009841 9.7e-10 67.8 58 53.4
Eucgr.H02240 Eucalyptus grandis HOM05D008343 ORTHO05D009841 9.7e-10 67.8 58 53.4
Dinv30038 Davidia involucrata HOM05D008343 ORTHO05D009841 1.7e-09 67.0 57 64.9
Eucgr.H01292 Eucalyptus grandis HOM05D008343 ORTHO05D009841 1.7e-09 67.0 58 53.4
TAR376G0584 Trochodendron aralioides HOM05D008343 ORTHO05D009841 1.7e-09 67.0 59 61.0
Eucgr.H02243 Eucalyptus grandis HOM05D008343 ORTHO05D009841 1.1e-08 64.3 51 58.8
Prupe.6G228500 Prunus persica HOM05D008343 ORTHO05D009841 1.4e-08 63.9 57 59.6
Eucgr.H02236 Eucalyptus grandis HOM05D008343 ORTHO05D009841 1.8e-08 63.5 58 51.7
Dinv26871 Davidia involucrata HOM05D008343 ORTHO05D009841 4.1e-08 62.4 58 58.6
Eucgr.H02233 Eucalyptus grandis HOM05D008343 ORTHO05D009841 9.1e-08 61.2 58 50.0
MD15G1289400 Malus domestica HOM05D014781 ORTHO05D009841 9.1e-08 61.2 60 55.0
Eucgr.H01293 Eucalyptus grandis HOM05D008343 ORTHO05D009841 1.6e-07 60.5 58 50.0
Potri.007G049400 Populus trichocarpa HOM05D008343 ORTHO05D009841 2.6e-07 59.7 57 63.2
TAR376G1160 Trochodendron aralioides HOM05D008343 ORTHO05D009841 2.6e-07 59.7 48 64.6
RcHm_v2.0_Chr2g0106731 Rosa chinensis HOM05D014781 ORTHO05D009841 3.5e-07 59.3 57 54.4
TAR376G0451 Trochodendron aralioides HOM05D008343 ORTHO05D009841 3.5e-07 59.3 50 58.0
CSS0015714 Camellia sinensis var. sinensis HOM05D008343 ORTHO05D009841 1.0e-06 57.8 63 54.0
CiPaw.01G012500 Carya illinoinensis HOM05D008343 ORTHO05D009841 1.0e-06 57.8 67 59.7
RcHm_v2.0_Chr1g0340091 Rosa chinensis HOM05D014781 ORTHO05D009841 1.0e-06 57.8 57 50.9
Nn1g04691 Nelumbo nucifera HOM05D008343 ORTHO05D009841 1.7e-06 57.0 72 54.2
TAR376G0088 Trochodendron aralioides HOM05D008343 ORTHO05D009841 2.9e-06 56.2 47 57.4
Potri.006G008066 Populus trichocarpa HOM05D008343 ORTHO05D009841 6.5e-06 55.1 61 55.7
Potri.016G015600 Populus trichocarpa HOM05D008343 ORTHO05D009841 6.5e-06 55.1 60 55.0
Thecc.01G063900 Theobroma cacao HOM05D018273 ORTHO05D009841 6.5e-06 55.1 65 55.4
Potri.007G049500 Populus trichocarpa HOM05D008343 ORTHO05D009841 8.5e-06 54.7 65 53.8


User provided reference genes

Program Settings