Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa004000 Carpinus fangiana HOM05D008581 ORTHO05D009966 2.3e-57 225.3 113 100.0
QL06p042132 Quercus lobata HOM05D008581 ORTHO05D009966 5.7e-32 141.0 113 63.7
QL06p042046 Quercus lobata HOM05D008581 ORTHO05D009966 6.3e-31 137.5 113 63.7
QL06p042091 Quercus lobata HOM05D008581 ORTHO05D009966 8.3e-31 137.1 113 63.7
QL06p042147 Quercus lobata HOM05D008581 ORTHO05D009966 3.6e-26 121.7 109 62.4
Haze_15424 Corylus avellana HOM05D017207 ORTHO05D010689 8.0e-26 120.6 92 71.7
CiPaw.01G021000 Carya illinoinensis HOM05D015383 ORTHO05D009966 2.3e-25 119.0 123 61.8
CiPaw.01G020500 Carya illinoinensis HOM05D015383 ORTHO05D009966 3.0e-25 118.6 123 61.8
CiPaw.01G020100 Carya illinoinensis HOM05D015383 ORTHO05D009966 2.6e-24 115.5 121 61.2
CiPaw.01G020700 Carya illinoinensis HOM05D015383 ORTHO05D009966 6.4e-23 110.9 116 58.6
CiPaw.01G020300 Carya illinoinensis HOM05D015383 ORTHO05D009966 3.2e-22 108.6 116 57.8
QL06p042049 Quercus lobata HOM05D008581 ORTHO05D009966 4.1e-22 108.2 107 56.1
Atru.chr3.365 Acer truncatum HOM05D008581 ORTHO05D009966 9.2e-22 107.1 125 54.4
CiPaw.01G020900 Carya illinoinensis HOM05D015383 ORTHO05D009966 2.7e-21 105.5 129 52.7
Atru.chr3.367 Acer truncatum HOM05D008581 ORTHO05D009966 1.0e-20 103.6 126 52.4
CiPaw.01G020000 Carya illinoinensis HOM05D015383 ORTHO05D009966 5.0e-20 101.3 121 54.5
Dinv39871 Davidia involucrata HOM05D008581 ORTHO05D009966 1.5e-19 99.8 122 50.8
Thecc.01G053400 Theobroma cacao HOM05D008581 ORTHO05D009966 2.1e-18 95.9 119 49.6
Ciclev10027209m.g Citrus clementina HOM05D008581 ORTHO05D009966 8.0e-18 94.0 124 48.4
Potri.007G042000 Populus trichocarpa HOM05D008581 ORTHO05D009966 1.1e-17 93.6 118 47.5
Potri.005G136800 Populus trichocarpa HOM05D008581 ORTHO05D009966 4.0e-17 91.7 116 46.6
CiPaw.02G009100 Carya illinoinensis HOM05D015383 ORTHO05D009966 5.2e-17 91.3 122 52.5
COL.COLO4_11388 Corchorus olitorius HOM05D008581 ORTHO05D009966 4.4e-16 88.2 121 47.9
Duzib264G0703 Durio zibethinus HOM05D008581 ORTHO05D009966 1.3e-15 86.7 115 42.6
Lj7C64T2 Lonicera japonica HOM05D008581 ORTHO05D009966 3.7e-15 85.1 118 46.6
Hma1.2p1_0200F.1_g086080 Hydrangea macrophylla HOM05D008581 ORTHO05D009966 1.4e-14 83.2 124 45.2
Duzib264G0396 Durio zibethinus HOM05D013202 ORTHO05D009966 2.4e-14 82.4 115 40.9
Lj7C67T5 Lonicera japonica HOM05D008581 ORTHO05D009966 2.4e-14 82.4 118 44.1
DCAR_025723 Daucus carota HOM05D008581 ORTHO05D009966 9.2e-14 80.5 118 44.1
Lj7C67G2 Lonicera japonica HOM05D008581 ORTHO05D009966 9.2e-14 80.5 115 43.5
Manes.12G100000 Manihot esculenta HOM05D008581 ORTHO05D009966 9.2e-14 80.5 123 46.3
Manes.13G126600 Manihot esculenta HOM05D008581 ORTHO05D009966 3.5e-13 78.6 119 42.0
Sabra07G0037300 Salix brachista HOM05D008581 ORTHO05D009966 1.0e-12 77.0 116 40.5
Lj7C67T3 Lonicera japonica HOM05D008581 ORTHO05D009966 3.0e-12 75.5 118 41.5
Rhsim10G0119400 Rhododendron simsii HOM05D008581 ORTHO05D009966 1.1e-11 73.6 130 40.8
Gorai.003G022200 Gossypium raimondii HOM05D013202 ORTHO05D009966 1.5e-11 73.2 114 43.0
Psat4g087360 Pisum sativum HOM05D008581 ORTHO05D011864 1.5e-11 73.2 125 44.0
Hma1.2p1_1415F.1_g282020 Hydrangea macrophylla HOM05D008581 ORTHO05D009966 3.3e-11 72.0 128 44.5
Gohir.A02G159800 Gossypium hirsutum HOM05D013202 ORTHO05D009966 4.3e-11 71.6 114 42.1
Gohir.D03G020800 Gossypium hirsutum HOM05D013202 ORTHO05D009966 4.3e-11 71.6 114 42.1
Gorai.003G022000 Gossypium raimondii HOM05D013202 ORTHO05D009966 4.3e-11 71.6 114 42.1
Peaxi162Scf00916g00007 Petunia axillaris HOM05D012691 ORTHO05D009966 4.3e-11 71.6 120 40.0
Lj7C64T0 Lonicera japonica HOM05D008581 ORTHO05D009966 9.5e-11 70.5 107 43.9
Glyma.11G057100 Glycine max HOM05D008581 ORTHO05D011864 1.6e-10 69.7 114 41.2
Gohir.A12G070300 Gossypium hirsutum HOM05D013202 ORTHO05D009966 2.8e-10 68.9 113 40.7
Gohir.A02G159700 Gossypium hirsutum HOM05D013202 ORTHO05D009966 4.7e-10 68.2 114 39.5
Eucgr.I00950 Eucalyptus grandis HOM05D022674 ORTHO05D009966 1.4e-09 66.6 125 36.8
Gohir.D03G021000 Gossypium hirsutum HOM05D013202 ORTHO05D009966 1.4e-09 66.6 115 39.1
TPR.G745 Trifolium pratense HOM05D008581 ORTHO05D009966 1.4e-09 66.6 117 41.0
Gorai.003G022300 Gossypium raimondii HOM05D013202 ORTHO05D009966 3.1e-09 65.5 114 36.8
Glyma.01G185100 Glycine max HOM05D008581 ORTHO05D009966 5.2e-09 64.7 117 41.0
Gohir.D12G088501 Gossypium hirsutum HOM05D013202 ORTHO05D009966 6.8e-09 64.3 114 40.4
Gorai.003G022400 Gossypium raimondii HOM05D013202 ORTHO05D009966 6.8e-09 64.3 115 38.3
Lalb_Chr16g0378261 Lupinus albus HOM05D008581 ORTHO05D011864 6.8e-09 64.3 118 40.7
Lalb_Chr16g0378441 Lupinus albus HOM05D008581 ORTHO05D011864 6.8e-09 64.3 118 40.7
ECA232G4194 Erigeron canadensis HOM05D008581 ORTHO05D009966 1.5e-08 63.2 114 37.7
Phvul.002G020000 Phaseolus vulgaris HOM05D008581 ORTHO05D011864 2.6e-08 62.4 114 36.0
Ca_21178_v3 Cicer arietinum L. HOM05D008581 ORTHO05D009966 3.4e-08 62.0 120 41.7
Ca_22185_v3 Cicer arietinum L. HOM05D008581 ORTHO05D009966 3.4e-08 62.0 120 41.7
Lalb_Chr05g0213241 Lupinus albus HOM05D008581 ORTHO05D011864 3.4e-08 62.0 119 38.7
Phvul.003G245400 Phaseolus vulgaris HOM05D008581 ORTHO05D009966 3.4e-08 62.0 116 38.8
arahy.Tifrunner.gnm1.ann1.7MI303 Arachis hypogaea HOM05D010906 ORTHO05D011864 4.4e-08 61.6 54 57.4
arahy.Tifrunner.gnm1.ann1.HVX4VE Arachis hypogaea HOM05D010906 ORTHO05D011864 4.4e-08 61.6 54 57.4
MSTRG.2893 Avicennia marina HOM05D008581 ORTHO05D009966 7.5e-08 60.8 115 39.1
Gorai.008G074700 Gossypium raimondii HOM05D013202 ORTHO05D009966 7.5e-08 60.8 116 40.5
VMungo1215G0067 Vigna mungo HOM05D008581 ORTHO05D011864 9.9e-08 60.5 118 41.5
CsaV3_6G043170 Cucumis sativus L. HOM05D022436 ORTHO05D009966 2.9e-07 58.9 60 48.3
FAN23G0591 Fragaria x ananassa HOM05D018300 ORTHO05D020671 4.9e-07 58.2 105 41.0
Lsat_1_v5_gn_4_167560 Lactuca sativa HOM05D008581 ORTHO05D009966 6.4e-07 57.8 121 40.5
ClCG01G016740 Citrullus lanatus HOM05D022436 ORTHO05D009966 8.3e-07 57.4 114 37.7
Ah.02g124160 Amaranthus hybridus HOM05D015383 ORTHO05D009966 1.1e-06 57.0 113 38.9
BcaC03g18399 Brassica carinata HOM05D011091 ORTHO05D013198 1.1e-06 57.0 115 32.2
C02p64780 Brassica napus HOM05D011091 ORTHO05D013198 1.1e-06 57.0 115 32.2
BolC2t12539H Brassica oleracea HOM05D011091 ORTHO05D013198 1.1e-06 57.0 115 32.2
TPR.G19008 Trifolium pratense HOM05D010906 ORTHO05D011864 1.1e-06 57.0 113 36.3
Prupe.7G135800 Prunus persica HOM05D018300 ORTHO05D020671 1.9e-06 56.2 122 35.2
Nitab4.5_0000310g0110 Nicotiana tabacum HOM05D012691 ORTHO05D009966 2.4e-06 55.8 124 38.7
MELO3C007553.2 Cucumis melo HOM05D022436 ORTHO05D009966 4.1e-06 55.1 116 37.9
Oeu050767.1 Olea europaea HOM05D028002 ORTHO05D009966 7.1e-06 54.3 111 36.9


User provided reference genes

Program Settings