Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa003962 Carpinus fangiana HOM05D005053 ORTHO05D006206 5.6e-124 447.6 220 100.0
RcHm_v2.0_Chr2g0104011 Rosa chinensis HOM05D005053 ORTHO05D006206 1.1e-108 396.7 220 87.3
Glyma.17G180900 Glycine max HOM05D005053 ORTHO05D006206 6.8e-106 387.5 221 86.9
MD02G1163200 Malus domestica HOM05D005053 ORTHO05D006206 1.2e-105 386.7 221 86.9
FvH4_1g14960 Fragaria vesca HOM05D005053 ORTHO05D006206 1.5e-105 386.3 221 84.6
FAN26G1713 Fragaria x ananassa HOM05D005053 ORTHO05D006206 2.0e-105 386.0 221 84.6
FAN23G1215 Fragaria x ananassa HOM05D005053 ORTHO05D006206 2.6e-105 385.6 221 84.2
FAN28G1734 Fragaria x ananassa HOM05D005053 ORTHO05D006206 5.8e-105 384.4 222 83.8
FAN19G0163 Fragaria x ananassa HOM05D005053 ORTHO05D006206 9.9e-105 383.6 221 84.2
Atru.chr3.440 Acer truncatum HOM05D005053 ORTHO05D006206 1.7e-104 382.9 220 85.9
Aqoxy6G00906 Aquilegia oxysepala HOM05D005053 ORTHO05D006206 2.2e-104 382.5 221 85.1
Gorai.008G072800 Gossypium raimondii HOM05D005053 ORTHO05D006206 3.8e-104 381.7 220 84.5
Phvul.003G248000 Phaseolus vulgaris HOM05D005053 ORTHO05D006206 4.9e-104 381.3 221 85.1
Cpa.g.sc6.408 Carica papaya HOM05D005053 ORTHO05D006206 6.4e-104 380.9 220 85.0
Ca_22210_v3 Cicer arietinum L. HOM05D005053 ORTHO05D006206 8.4e-104 380.6 221 83.7
COL.COLO4_11341 Corchorus olitorius HOM05D005053 ORTHO05D006206 8.4e-104 380.6 220 84.1
Lalb_Chr09g0333681 Lupinus albus HOM05D005053 ORTHO05D006206 8.4e-104 380.6 221 84.6
Lj4g0026236 Lotus japonicus HOM05D005053 ORTHO05D006206 1.1e-103 380.2 220 84.5
VMungo0251G0766 Vigna mungo HOM05D005053 ORTHO05D006206 1.4e-103 379.8 221 86.0
Manes.13G129200 Manihot esculenta HOM05D005053 ORTHO05D006206 1.9e-103 379.4 220 84.1
Thecc.01G049700 Theobroma cacao HOM05D005053 ORTHO05D006206 9.3e-103 377.1 221 83.3
MD15G1276200 Malus domestica HOM05D005053 ORTHO05D006206 2.7e-102 375.6 221 85.5
arahy.Tifrunner.gnm1.ann1.VE46QQ Arachis hypogaea HOM05D005053 ORTHO05D006206 3.5e-102 375.2 221 84.6
Haze_15460 Corylus avellana HOM05D005053 ORTHO05D006206 7.8e-102 374.0 200 93.5
Potri.007G037800 Populus trichocarpa HOM05D005053 ORTHO05D006206 7.8e-102 374.0 220 81.4
arahy.Tifrunner.gnm1.ann1.IMYE37 Arachis hypogaea HOM05D005053 ORTHO05D006206 2.3e-101 372.5 221 83.7
Medtr8g079240 Medicago truncatula HOM05D005053 ORTHO05D006206 2.3e-101 372.5 221 81.4
CSS0024932 Camellia sinensis var. sinensis HOM05D005053 ORTHO05D006206 3.0e-101 372.1 221 84.6
GSVIVG01005060001 Vitis vinifera HOM05D005053 ORTHO05D006206 5.1e-101 371.3 220 82.7
PGR102G2816 Punica granatum HOM05D005053 ORTHO05D006206 1.1e-100 370.2 220 81.8
HanXRQChr14g0448331 Helianthus annuus HOM05D005053 ORTHO05D006206 5.6e-100 367.9 221 83.7
ClCG01G016600 Citrullus lanatus HOM05D005053 ORTHO05D006206 1.3e-99 366.7 221 80.5
Ciclev10026393m.g Citrus clementina HOM05D005053 ORTHO05D006206 1.3e-99 366.7 238 78.2
PSO675G4006 Papaver somniferum HOM05D005053 ORTHO05D006206 1.3e-99 366.7 220 82.3
MELO3C007534.2 Cucumis melo HOM05D005053 ORTHO05D006206 2.1e-99 365.9 221 80.5
PSO541G4895 Papaver somniferum HOM05D005053 ORTHO05D006206 2.1e-99 365.9 220 82.3
Actinidia36514 Actinidia chinensis HOM05D005053 ORTHO05D006206 4.8e-99 364.8 221 83.7
CsaV3_6G042980 Cucumis sativus L. HOM05D005053 ORTHO05D006206 4.8e-99 364.8 221 80.1
TAR376G0500 Trochodendron aralioides HOM05D005053 ORTHO05D006206 1.1e-98 363.6 220 80.9
Cc07_g05640 Coffea canephora HOM05D005053 ORTHO05D006206 1.8e-98 362.8 220 80.5
Actinidia12070 Actinidia chinensis HOM05D005053 ORTHO05D006206 2.4e-98 362.5 220 82.3
vmacro17912 Vaccinium macrocarpon HOM05D005053 ORTHO05D006206 3.1e-98 362.1 221 80.1
HanXRQChr07g0199901 Helianthus annuus HOM05D005053 ORTHO05D006206 5.3e-98 361.3 221 80.5
ECA238G1636 Erigeron canadensis HOM05D005053 ORTHO05D006206 6.9e-98 360.9 221 81.0
AUR62001971 Chenopodium quinoa HOM05D005053 ORTHO05D006206 9.0e-98 360.5 221 81.4
Lsat_1_v5_gn_2_86920 Lactuca sativa HOM05D005053 ORTHO05D006206 9.0e-98 360.5 221 80.5
THA.LOC104819229 Tarenaya hassleriana HOM05D005053 ORTHO05D006206 1.2e-97 360.1 220 79.5
EL10Ac6g15144 Beta vulgaris HOM05D005053 ORTHO05D006206 4.4e-97 358.2 221 81.4
Migut.H00475 Erythranthe guttata HOM05D005053 ORTHO05D006206 5.8e-97 357.8 220 81.4
Sc03g0001310 Simmondsia chinensis HOM05D005053 ORTHO05D006206 9.9e-97 357.1 221 81.4
Hma1.2p1_0687F.1_g203520 Hydrangea macrophylla HOM05D005053 ORTHO05D006206 1.7e-96 356.3 220 80.0
AT5G66930 Arabidopsis thaliana HOM05D005053 ORTHO05D006206 2.9e-96 355.5 220 79.5
Sed0021889 Sechium edule HOM05D005053 ORTHO05D006206 3.8e-96 355.1 220 77.7
Eucgr.H01988 Eucalyptus grandis HOM05D005053 ORTHO05D006206 6.4e-96 354.4 221 78.7
Nn5g29376 Nelumbo nucifera HOM05D005053 ORTHO05D006206 1.4e-95 353.2 221 80.5
CARHR280750 Cardamine hirsuta HOM05D005053 ORTHO05D006206 5.4e-95 351.3 220 79.1
Hund13583 Selenicereus undatus HOM05D005053 ORTHO05D006206 9.3e-95 350.5 221 78.3
Carub.0008s2757 Capsella rubella HOM05D005053 ORTHO05D006206 3.5e-94 348.6 220 77.7
THA.LOC104821262 Tarenaya hassleriana HOM05D005053 ORTHO05D006206 3.5e-94 348.6 220 77.3
AL8G44450 Arabidopsis lyrata HOM05D005053 ORTHO05D006206 4.6e-94 348.2 220 78.2
Aa31LG1G15480 Aethionema arabicum HOM05D005053 ORTHO05D006206 7.9e-94 347.4 220 77.3
CiPaw.01G025900 Carya illinoinensis HOM05D005053 ORTHO05D006206 7.9e-94 347.4 196 86.2
QL06p043337 Quercus lobata HOM05D005053 ORTHO05D006206 1.9e-92 342.8 196 85.7
MSTRG.15402 Avicennia marina HOM05D005053 ORTHO05D006206 3.3e-92 342.0 229 75.1
Nn6g32115 Nelumbo nucifera HOM05D005053 ORTHO05D006206 5.6e-92 341.3 221 74.7
unitig_736.g22369 Utricularia gibba HOM05D005053 ORTHO05D006206 1.3e-91 340.1 223 78.0
Oeu004887.1 Olea europaea HOM05D005053 ORTHO05D006206 1.6e-91 339.7 220 78.2
CAN.G470.7 Capsicum annuum HOM05D005053 ORTHO05D006206 2.8e-91 339.0 220 75.5
Nitab4.5_0000806g0140 Nicotiana tabacum HOM05D005053 ORTHO05D006206 2.8e-91 339.0 220 76.4
Sp2g29730 Schrenkiella parvula HOM05D005053 ORTHO05D006206 4.8e-91 338.2 220 76.4
Gohir.A12G069100 Gossypium hirsutum HOM05D005053 ORTHO05D006206 8.1e-91 337.4 194 84.5
Solyc02g065180.3 Solanum lycopersicum HOM05D005053 ORTHO05D006206 8.1e-91 337.4 220 76.4
Sopen02g015310 Solanum pennellii HOM05D005053 ORTHO05D006206 8.1e-91 337.4 220 76.4
Gohir.D12G090200 Gossypium hirsutum HOM05D005053 ORTHO05D006206 1.8e-90 336.3 194 83.5
BcaB04g20086 Brassica carinata HOM05D005053 ORTHO05D006206 5.3e-90 334.7 221 75.1
Ca_22228_v3 Cicer arietinum L. HOM05D005053 ORTHO05D006206 5.3e-90 334.7 195 83.1
TWI09G0689 Tripterygium wilfordii HOM05D005053 ORTHO05D006206 1.5e-89 333.2 198 80.8
TWI53G1273 Tripterygium wilfordii HOM05D005053 ORTHO05D006206 3.4e-89 332.0 195 81.0
Thhalv10005270m.g Eutrema salsugineum HOM05D005053 ORTHO05D006206 1.3e-88 330.1 212 76.9
Duzib264G0045 Durio zibethinus HOM05D005053 ORTHO05D006206 8.4e-88 327.4 194 80.9
SGA_v2.0_scaffold27G11440 Striga asiatica HOM05D005053 ORTHO05D006206 1.4e-87 326.6 221 74.7
TAR628G0491 Trochodendron aralioides HOM05D005053 ORTHO05D006206 1.4e-87 326.6 194 81.4
Dinv29944 Davidia involucrata HOM05D005053 ORTHO05D006206 1.9e-87 326.2 198 82.8
SGA_v2.0_scaffold204G41608 Striga asiatica HOM05D005053 ORTHO05D006206 1.9e-87 326.2 221 74.7
BcaC06g34767 Brassica carinata HOM05D005053 ORTHO05D006206 2.4e-87 325.9 221 74.2
C07p24820 Brassica napus HOM05D005053 ORTHO05D006206 2.4e-87 325.9 221 74.2
BraA07t29424Z Brassica rapa HOM05D005053 ORTHO05D006206 2.4e-87 325.9 221 74.7
Duzib264G0685 Durio zibethinus HOM05D005053 ORTHO05D006206 9.3e-87 323.9 194 80.4
A07p16970 Brassica napus HOM05D005053 ORTHO05D006206 1.2e-86 323.6 221 74.2
Peaxi162Scf00049g01010 Petunia axillaris HOM05D005053 ORTHO05D006206 1.6e-86 323.2 233 70.8
Rhsim08G0104900 Rhododendron simsii HOM05D005053 ORTHO05D006206 3.5e-86 322.0 301 59.5
BraA09t36613Z Brassica rapa HOM05D005053 ORTHO05D006206 1.0e-85 320.5 221 72.4
A09p09640 Brassica napus HOM05D005053 ORTHO05D006206 1.3e-85 320.1 221 72.9
BcaB02g09970 Brassica carinata HOM05D005053 ORTHO05D006206 2.3e-85 319.3 221 73.8
BcaC04g23174 Brassica carinata HOM05D005053 ORTHO05D006206 2.3e-85 319.3 222 73.0
C09p11390 Brassica napus HOM05D005053 ORTHO05D006206 2.3e-85 319.3 222 73.0
AUR62003832 Chenopodium quinoa HOM05D005053 ORTHO05D006206 5.1e-85 318.2 195 82.1
BolC9t54027H Brassica oleracea HOM05D005053 ORTHO05D006206 5.6e-84 314.7 223 72.6
Duzib147G0596 Durio zibethinus HOM05D005053 ORTHO05D006206 1.6e-83 313.2 194 79.4
Sabra07G0034100 Salix brachista HOM05D005053 ORTHO05D006206 2.8e-83 312.4 197 77.7
MBI16_g19902_MAGBIO Magnolia biondii HOM05D005053 ORTHO05D006206 3.1e-82 308.9 183 82.5
HPP92_024294 Vanilla planifolia HOM05D005053 ORTHO05D006206 3.1e-82 308.9 222 69.8
HPP92_024303 Vanilla planifolia HOM05D005053 ORTHO05D006206 3.1e-82 308.9 222 69.8
ATR0225G009 Amborella trichopoda HOM05D005053 ORTHO05D006206 4.0e-82 308.5 221 69.2
CiPaw.02G011700 Carya illinoinensis HOM05D005053 ORTHO05D006206 4.0e-82 308.5 221 71.5
Ah.02g124120 Amaranthus hybridus HOM05D005053 ORTHO05D006206 9.0e-82 307.4 212 73.1
SEGI_13826 Sequoiadendron giganteum HOM05D005053 ORTHO05D006206 1.2e-81 307.0 221 69.2
BolC7t43007H Brassica oleracea HOM05D005053 ORTHO05D006206 2.2e-80 302.8 210 72.9
RhsimUnG0070600 Rhododendron simsii HOM05D005053 ORTHO05D006206 6.5e-80 301.2 290 58.3
Nitab4.5_0009901g0010 Nicotiana tabacum HOM05D005053 ORTHO05D006206 2.5e-76 289.3 205 71.7
Mapoly0011s0084 Marchantia polymorpha HOM05D005053 ORTHO05D006206 1.3e-75 287.0 220 65.0
Peaxi162Scf00993g00120 Petunia axillaris HOM05D005053 ORTHO05D006206 6.9e-74 281.2 193 72.0
PGSC0003DMG400010070 Solanum tuberosum HOM05D005053 ORTHO05D006206 1.0e-72 277.3 214 66.4
Solyc02g090330.3 Solanum lycopersicum HOM05D005053 ORTHO05D006206 1.3e-72 276.9 215 66.0
Prupe.7G140800 Prunus persica HOM05D005053 ORTHO05D006206 1.4e-71 273.5 163 84.7
SMO271G0126 Selaginella moellendorffii HOM05D005053 ORTHO05D006206 1.9e-71 273.1 221 61.5
Lj7A44T18 Lonicera japonica HOM05D005053 ORTHO05D006206 2.5e-71 272.7 178 77.5
Os12g0428200 Oryza sativa ssp. japonica HOM05D005053 ORTHO05D006206 2.1e-70 269.6 220 61.4
BcaC03g18393 Brassica carinata HOM05D005053 ORTHO05D006206 3.6e-70 268.9 225 63.6
C02p64670 Brassica napus HOM05D005053 ORTHO05D006206 3.6e-70 268.9 225 63.6
DCAR_025697 Daucus carota HOM05D005053 ORTHO05D006206 7.9e-70 267.7 169 79.3
Dinv39902 Davidia involucrata HOM05D005053 ORTHO05D006206 1.0e-69 267.3 172 76.7
Pp3c11_5110 Physcomitrium patens HOM05D005053 ORTHO05D006206 6.7e-69 264.6 221 59.7
BolC2t12528H Brassica oleracea HOM05D005053 ORTHO05D006206 1.1e-68 263.8 220 63.6
Psat4g088960 Pisum sativum HOM05D005053 ORTHO05D006206 1.1e-66 257.3 159 81.8
Zm00001eb184240 Zea mays HOM05D005053 ORTHO05D006206 6.9e-66 254.6 220 60.0
CBR_g23008 Chara braunii HOM05D005053 ORTHO05D006206 9.4e-63 244.2 221 53.4
AagrBONN_evm.TU.Sc2ySwM_344.1821 Anthoceros agrestis HOM05D005053 ORTHO05D006206 2.2e-59 233.0 196 60.7
AagrBONN_evm.TU.Sc2ySwM_344.1822 Anthoceros agrestis HOM05D005053 ORTHO05D006206 2.2e-59 233.0 223 54.7
Nitab4.5_0002157g0070 Nicotiana tabacum HOM05D005053 ORTHO05D006206 2.2e-59 233.0 169 69.8
Os12g0446700 Oryza sativa ssp. japonica HOM05D005053 ORTHO05D006206 6.3e-59 231.5 194 60.3
Ah.03g144090 Amaranthus hybridus HOM05D005053 ORTHO05D006206 5.3e-58 228.4 197 64.0
Sopen02g035010 Solanum pennellii HOM05D005053 ORTHO05D006206 2.9e-48 196.1 162 63.6
CDE02G0556 Ceratophyllum demersum HOM05D005053 ORTHO05D006206 1.9e-47 193.4 152 63.2
AagrBONN_evm.TU.Sc2ySwM_369.468 Anthoceros agrestis HOM05D000050 ORTHO05D000771 2.5e-47 193.0 220 47.3
Psat4g089040 Pisum sativum HOM05D005053 ORTHO05D006206 5.5e-47 191.8 184 57.6
TPR.G40637 Trifolium pratense HOM05D005053 ORTHO05D006206 9.7e-44 181.0 93 88.2
TPR.G672 Trifolium pratense HOM05D005053 ORTHO05D006206 2.2e-35 153.3 98 78.6
MCO07G250 Micromonas commoda HOM05D005053 ORTHO05D006206 4.8e-35 152.1 222 35.6
FAN19G1388 Fragaria x ananassa HOM05D005053 ORTHO05D006206 3.5e-33 146.0 84 84.5
SGA_v2.0_scaffold15G07238 Striga asiatica HOM05D005053 ORTHO05D006206 3.5e-33 146.0 249 39.8
Cre07.g334700 Chlamydomonas reinhardtii HOM05D005053 ORTHO05D006206 4.5e-33 145.6 245 35.5
PRCOL_00006110 Prasinoderma coloniale HOM05D005053 ORTHO05D006206 2.8e-30 136.3 220 38.2
Zm00001eb184160 Zea mays HOM05D005053 ORTHO05D006206 1.8e-29 133.7 84 71.4
Ciclev10027037m.g Citrus clementina HOM05D005053 ORTHO05D006206 3.5e-25 119.4 82 74.4
Nitab4.5_0003750g0060 Nicotiana tabacum HOM05D005053 ORTHO05D006206 1.2e-22 110.9 141 44.7
AUR62028910 Chenopodium quinoa HOM05D005053 ORTHO05D006206 1.2e-20 104.4 94 59.6
CAN.G836.41 Capsicum annuum HOM05D005053 ORTHO05D024763 3.4e-12 76.3 143 41.3
Cfa024505 Carpinus fangiana HOM05D005053 ORTHO05D124968 9.2e-10 68.2 223 24.2
unitig_899.g14971 Utricularia gibba HOM05D000351 ORTHO05D006179 2.5e-07 60.1 47 57.4


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