Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa003796 Carpinus fangiana HOM05D006438 ORTHO05D007998 0.0e+00 1201.4 651 100.0
Haze_15664 Corylus avellana HOM05D006438 ORTHO05D007998 0.0e+00 1140.6 651 95.4
CiPaw.02G041100 Carya illinoinensis HOM05D006438 ORTHO05D007998 4.6e-291 1004.2 649 82.0
QL11p022848 Quercus lobata HOM05D006438 ORTHO05D007998 1.5e-286 989.2 651 80.3
QL06p050047 Quercus lobata HOM05D006438 ORTHO05D007998 3.4e-286 988.0 651 80.0
Dinv32596 Davidia involucrata HOM05D006438 ORTHO05D007998 1.3e-258 896.3 651 73.0
Manes.13G078900 Manihot esculenta HOM05D006438 ORTHO05D007998 4.3e-257 891.3 653 73.4
Prupe.2G189300 Prunus persica HOM05D006438 ORTHO05D007998 1.9e-252 875.9 648 72.2
CSS0029538 Camellia sinensis var. sinensis HOM05D006438 ORTHO05D007998 2.7e-251 872.1 651 73.7
CSS0017951 Camellia sinensis var. sinensis HOM05D006438 ORTHO05D007998 8.7e-250 867.1 651 73.4
Actinidia20246 Actinidia chinensis HOM05D006438 ORTHO05D007998 1.1e-249 866.7 652 71.8
TWI59G0942 Tripterygium wilfordii HOM05D006438 ORTHO05D007998 3.3e-249 865.1 653 71.5
Lj7A500T115 Lonicera japonica HOM05D006438 ORTHO05D007998 7.4e-249 864.0 661 69.4
Manes.13G077643 Manihot esculenta HOM05D006438 ORTHO05D007998 3.1e-247 858.6 653 71.5
Ciclev10019221m.g Citrus clementina HOM05D006438 ORTHO05D007998 5.3e-247 857.8 656 72.9
Sabra14G0072800 Salix brachista HOM05D006438 ORTHO05D007998 3.4e-246 855.1 653 71.5
vmacro13165 Vaccinium macrocarpon HOM05D006438 ORTHO05D007998 8.5e-245 850.5 653 70.9
Potri.002G171600 Populus trichocarpa HOM05D006438 ORTHO05D007998 2.5e-244 849.0 651 71.6
Rhsim07G0003900 Rhododendron simsii HOM05D006438 ORTHO05D007998 1.2e-243 846.7 655 72.8
FvH4_7g16650 Fragaria vesca HOM05D006438 ORTHO05D007998 3.0e-242 842.0 651 69.1
Duzib138G1266 Durio zibethinus HOM05D006438 ORTHO05D007998 3.9e-242 841.6 673 68.4
GSVIVG01027157001 Vitis vinifera HOM05D006438 ORTHO05D007998 1.3e-240 836.6 653 72.4
FAN10G0107 Fragaria x ananassa HOM05D006438 ORTHO05D007998 6.3e-240 834.3 654 68.8
FAN10G3447 Fragaria x ananassa HOM05D006438 ORTHO05D007998 1.1e-239 833.6 652 68.9
Thecc.01G341800 Theobroma cacao HOM05D006438 ORTHO05D007998 1.2e-238 830.1 677 67.5
FAN03G1123 Fragaria x ananassa HOM05D006438 ORTHO05D007998 1.3e-237 826.6 654 68.3
RcHm_v2.0_Chr1g0359811 Rosa chinensis HOM05D006438 ORTHO05D007998 7.2e-236 820.8 667 67.0
Gohir.A08G125100 Gossypium hirsutum HOM05D006438 ORTHO05D007998 1.6e-235 819.7 673 67.3
Glyma.19G256300 Glycine max HOM05D006438 ORTHO05D007998 7.9e-235 817.4 647 68.8
DCAR_005393 Daucus carota HOM05D006438 ORTHO05D007998 3.0e-234 815.5 651 67.9
CANSAT56G2224 Cannabis sativa HOM05D006438 ORTHO05D007998 3.9e-234 815.1 656 67.2
Glyma.03G257800 Glycine max HOM05D006438 ORTHO05D007998 1.5e-233 813.1 644 68.6
Cpa.g.sc96.25 Carica papaya HOM05D006438 ORTHO05D007998 7.4e-233 810.8 654 68.3
MD07G1150500 Malus domestica HOM05D006438 ORTHO05D007998 7.4e-233 810.8 648 66.8
Lj1g0004073 Lotus japonicus HOM05D006438 ORTHO05D007998 2.2e-232 809.3 656 67.8
Lalb_Chr18g0044491 Lupinus albus HOM05D006438 ORTHO05D007998 2.4e-231 805.8 657 68.2
Sc23g0002070 Simmondsia chinensis HOM05D006438 ORTHO05D007998 5.3e-231 804.7 677 65.9
Gohir.D08G146100 Gossypium hirsutum HOM05D006438 ORTHO05D007998 1.3e-229 800.0 664 66.9
Nn3g18981 Nelumbo nucifera HOM05D006438 ORTHO05D007998 2.9e-229 798.9 649 66.4
Gorai.004G151600 Gossypium raimondii HOM05D006438 ORTHO05D007998 6.5e-229 797.7 664 66.9
Phvul.006G113600 Phaseolus vulgaris HOM05D006438 ORTHO05D007998 3.2e-228 795.4 653 66.0
Hund27192 Selenicereus undatus HOM05D006438 ORTHO05D007998 2.7e-227 792.3 674 64.4
FAN01G1234 Fragaria x ananassa HOM05D006438 ORTHO05D007998 6.1e-227 791.2 654 66.1
MD01G1082100 Malus domestica HOM05D006438 ORTHO05D007998 1.5e-225 786.6 654 65.4
VMungo0540G1767 Vigna mungo HOM05D006438 ORTHO05D007998 2.6e-225 785.8 652 65.2
Ca_09510_v3 Cicer arietinum L. HOM05D006438 ORTHO05D007998 5.7e-225 784.6 663 66.5
Ca_30059_v3 Cicer arietinum L. HOM05D006438 ORTHO05D007998 5.7e-225 784.6 663 66.5
MSTRG.17348 Avicennia marina HOM05D006438 ORTHO05D007998 3.7e-224 781.9 670 63.3
ClCG06G001260 Citrullus lanatus HOM05D006438 ORTHO05D007998 3.1e-223 778.9 653 67.2
Nn1g00253 Nelumbo nucifera HOM05D006438 ORTHO05D007998 6.5e-221 771.2 650 67.1
Migut.B01878 Erythranthe guttata HOM05D006438 ORTHO05D007998 4.2e-220 768.5 665 62.6
PGR031G2090 Punica granatum HOM05D006438 ORTHO05D007998 4.2e-220 768.5 653 66.3
PGSC0003DMG400000230 Solanum tuberosum HOM05D006438 ORTHO05D007998 3.6e-219 765.4 673 63.6
MELO3C022408.2 Cucumis melo HOM05D006438 ORTHO05D007998 1.0e-218 763.8 655 67.0
Eucgr.A01924 Eucalyptus grandis HOM05D006438 ORTHO05D007998 1.8e-218 763.1 652 64.1
EL10Ac1g00261 Beta vulgaris HOM05D006438 ORTHO05D007998 8.8e-218 760.8 674 62.2
Ah.05g179490 Amaranthus hybridus HOM05D006438 ORTHO05D007998 1.2e-217 760.4 671 64.1
Peaxi162Scf00786g00012 Petunia axillaris HOM05D006438 ORTHO05D007998 1.5e-217 760.0 671 63.0
Potri.014G099300 Populus trichocarpa HOM05D006438 ORTHO05D007998 3.3e-217 758.8 578 71.5
Sopen01g039750 Solanum pennellii HOM05D006438 ORTHO05D007998 1.3e-216 756.9 673 63.3
Nitab4.5_0013402g0010 Nicotiana tabacum HOM05D006438 ORTHO05D007998 4.8e-216 755.0 673 63.3
AUR62023453 Chenopodium quinoa HOM05D006438 ORTHO05D007998 4.1e-215 751.9 674 61.0
Solyc01g096030.4 Solanum lycopersicum HOM05D006438 ORTHO05D007998 5.3e-215 751.5 673 63.2
TPR.G4682 Trifolium pratense HOM05D006438 ORTHO05D007998 5.3e-215 751.5 632 65.7
CAN.G1415.26 Capsicum annuum HOM05D006438 ORTHO05D007998 4.5e-214 748.4 671 62.4
Nitab4.5_0000172g0480 Nicotiana tabacum HOM05D006438 ORTHO05D007998 1.3e-213 746.9 673 62.4
arahy.Tifrunner.gnm1.ann1.QN4XTT Arachis hypogaea HOM05D006438 ORTHO05D007998 3.0e-210 735.7 650 63.7
arahy.Tifrunner.gnm1.ann1.TZA1ET Arachis hypogaea HOM05D006438 ORTHO05D007998 5.2e-210 734.9 644 64.1
COL.COLO4_06280 Corchorus olitorius HOM05D006438 ORTHO05D007998 6.8e-210 734.6 607 66.6
CsaV3_6G007190 Cucumis sativus L. HOM05D006438 ORTHO05D007998 8.8e-210 734.2 655 65.8
SalBow3G2635 Salvia bowleyana HOM05D006438 ORTHO05D007998 2.0e-209 733.0 660 60.2
SGA_v2.0_scaffold5G03022 Striga asiatica HOM05D006438 ORTHO05D007998 9.8e-209 730.7 659 60.7
Medtr7g117420 Medicago truncatula HOM05D006438 ORTHO05D007998 1.7e-208 729.9 632 66.5
PSO170G3726 Papaver somniferum HOM05D006438 ORTHO05D007998 8.3e-208 727.6 655 60.6
ECA236G2598 Erigeron canadensis HOM05D006438 ORTHO05D007998 1.8e-207 726.5 644 62.1
Psat3g002440 Pisum sativum HOM05D006438 ORTHO05D007998 1.7e-205 719.9 658 62.0
THA.LOC104817364 Tarenaya hassleriana HOM05D006438 ORTHO05D007998 3.8e-205 718.8 682 60.6
PSO063G1116 Papaver somniferum HOM05D006438 ORTHO05D007998 5.0e-205 718.4 657 60.1
HanXRQChr04g0120541 Helianthus annuus HOM05D006438 ORTHO05D007998 9.5e-204 714.1 653 63.2
Sed0005284 Sechium edule HOM05D006438 ORTHO05D007998 3.0e-202 709.1 645 62.8
MBI07_g40678_MAGBIO Magnolia biondii HOM05D006438 ORTHO05D007998 4.4e-201 705.3 660 58.6
AL5G44360 Arabidopsis lyrata HOM05D006438 ORTHO05D007998 2.5e-196 689.5 684 57.7
Aqoxy5G04279 Aquilegia oxysepala HOM05D006438 ORTHO05D007998 3.6e-195 685.6 654 58.7
AUR62004500 Chenopodium quinoa HOM05D006438 ORTHO05D007998 4.7e-195 685.3 660 58.2
Aa31LG10G15790 Aethionema arabicum HOM05D006438 ORTHO05D007998 8.9e-194 681.0 656 57.8
ATR0602G124 Amborella trichopoda HOM05D006438 ORTHO05D007998 3.5e-190 669.1 673 55.1
AT3G61800 Arabidopsis thaliana HOM05D006438 ORTHO05D007998 8.6e-189 664.5 684 55.4
Carub.0005s2854 Capsella rubella HOM05D006438 ORTHO05D007998 1.2e-187 660.6 683 54.9
Thhalv10005821m.g Eutrema salsugineum HOM05D006438 ORTHO05D007998 4.7e-187 658.7 682 55.0
Sp5g01570 Schrenkiella parvula HOM05D006438 ORTHO05D007998 1.1e-186 657.5 684 54.8
BraA07t30216Z Brassica rapa HOM05D006438 ORTHO05D007998 5.8e-185 651.7 683 55.6
BolC6t37959H Brassica oleracea HOM05D006438 ORTHO05D007998 1.4e-183 647.1 679 55.8
A07p25760 Brassica napus HOM05D006438 ORTHO05D007998 1.2e-182 644.0 683 54.9
CARHR172130 Cardamine hirsuta HOM05D006438 ORTHO05D007998 1.6e-182 643.7 688 54.4
Lsat_1_v5_gn_7_1020 Lactuca sativa HOM05D006438 ORTHO05D007998 3.5e-182 642.5 675 57.0
Actinidia10144 Actinidia chinensis HOM05D006438 ORTHO05D007998 1.7e-181 640.2 472 72.0
C06p27980 Brassica napus HOM05D006438 ORTHO05D007998 3.0e-181 639.4 679 55.1
HPP92_008818 Vanilla planifolia HOM05D006438 ORTHO05D007998 1.4e-175 620.5 673 52.0
unitig_37.g12626 Utricularia gibba HOM05D006438 ORTHO05D007998 2.2e-168 596.7 621 54.9
Dinv35119 Davidia involucrata HOM05D006438 ORTHO05D007998 2.0e-145 520.4 654 50.2
SEGI_11798 Sequoiadendron giganteum HOM05D006438 ORTHO05D007998 1.1e-143 514.6 692 46.0
Mapoly0002s0048 Marchantia polymorpha HOM05D006438 ORTHO05D007998 3.0e-133 479.9 675 43.7
BcaC08g45166 Brassica carinata HOM05D006438 ORTHO05D007998 1.4e-130 471.1 561 50.1
Cc10_g13840 Coffea canephora HOM05D006438 ORTHO05D007998 2.5e-127 460.3 402 68.4
Atru.chr5.676 Acer truncatum HOM05D006438 ORTHO05D007998 3.6e-126 456.4 310 78.7
Zm00001eb378420 Zea mays HOM05D006438 ORTHO05D007998 9.1e-122 441.8 633 43.9
Pp3c3_31410 Physcomitrium patens HOM05D006438 ORTHO05D007998 2.0e-121 440.7 700 39.1
SMO365G0083 Selaginella moellendorffii HOM05D006438 ORTHO05D007998 1.5e-116 424.5 658 40.6
SHI13317 Sapria himalayana HOM05D006438 ORTHO05D007998 1.1e-103 381.7 346 60.1
BcaC08g45168 Brassica carinata HOM05D006438 ORTHO05D007998 3.6e-102 376.7 320 64.1
CDE08G0794 Ceratophyllum demersum HOM05D006438 ORTHO05D007998 6.1e-102 375.9 331 61.9
Atru.chr5.675 Acer truncatum HOM05D006438 ORTHO05D007998 2.3e-85 320.9 244 68.9
AagrBONN_evm.TU.Sc2ySwM_368.299 Anthoceros agrestis HOM05D006438 ORTHO05D007998 1.1e-74 285.4 615 32.5
BcaC08g45167 Brassica carinata HOM05D006438 ORTHO05D007998 9.2e-58 229.2 245 54.3
C08p42400 Brassica napus HOM05D006438 ORTHO05D007998 9.2e-50 202.6 325 43.7
SEGI_17110 Sequoiadendron giganteum HOM05D006438 ORTHO05D007998 7.8e-49 199.5 226 46.5
BraA06t25827Z Brassica rapa HOM05D006438 ORTHO05D007998 1.2e-46 192.2 263 47.9
Sabra02G0141200 Salix brachista HOM05D006438 ORTHO05D007998 7.4e-31 139.8 358 31.6
SEGI_37113 Sequoiadendron giganteum HOM05D006438 ORTHO05D007998 2.9e-19 101.3 181 34.8
Zm00001eb167390 Zea mays HOM05D006438 ORTHO05D007998 2.0e-12 78.6 88 50.0
MCO15G002 Micromonas commoda HOM05D006438 ORTHO05D007998 4.6e-09 67.4 174 30.5
Aa31sc496G10 Aethionema arabicum HOM05D006438 ORTHO05D007998 6.7e-08 63.5 121 38.0
A06p28820 Brassica napus HOM05D003696 ORTHO05D016804 3.3e-07 61.2 163 34.4


User provided reference genes

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