Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa003762 Carpinus fangiana HOM05D006631 ORTHO05D008359 1.4e-153 546.2 273 100.0
CiPaw.01G079400 Carya illinoinensis HOM05D006631 ORTHO05D008359 8.2e-125 450.7 273 83.5
QL08p046273 Quercus lobata HOM05D006631 ORTHO05D008359 2.2e-122 442.6 273 83.2
Gorai.007G111000 Gossypium raimondii HOM05D006631 ORTHO05D008359 4.3e-118 428.3 273 78.8
Gohir.D11G103700 Gossypium hirsutum HOM05D006631 ORTHO05D008359 2.8e-117 425.6 273 78.0
Thecc.01G337000 Theobroma cacao HOM05D006631 ORTHO05D008359 5.3e-116 421.4 273 78.4
Gohir.A11G099200 Gossypium hirsutum HOM05D006631 ORTHO05D008359 9.1e-116 420.6 273 76.9
Dinv34238 Davidia involucrata HOM05D006631 ORTHO05D008359 1.0e-114 417.2 275 79.3
RcHm_v2.0_Chr1g0360621 Rosa chinensis HOM05D006631 ORTHO05D008359 2.9e-114 415.6 276 75.7
Prupe.2G193800 Prunus persica HOM05D006631 ORTHO05D008359 1.1e-113 413.7 273 76.9
Duzib138G0935 Durio zibethinus HOM05D006631 ORTHO05D008359 3.2e-113 412.1 273 78.0
Lalb_Chr19g0133561 Lupinus albus HOM05D006631 ORTHO05D008359 3.2e-113 412.1 276 75.7
FvH4_7g17240 Fragaria vesca HOM05D006631 ORTHO05D008359 1.2e-112 410.2 275 74.5
Manes.05G019200 Manihot esculenta HOM05D006631 ORTHO05D008359 2.1e-112 409.5 274 76.6
TWI59G0463 Tripterygium wilfordii HOM05D006631 ORTHO05D008359 7.9e-112 407.5 274 76.6
Potri.014G102400 Populus trichocarpa HOM05D006631 ORTHO05D008359 1.8e-111 406.4 276 75.0
FAN06G3756 Fragaria x ananassa HOM05D006631 ORTHO05D008359 3.0e-111 405.6 277 74.0
GSVIVG01027398001 Vitis vinifera HOM05D006631 ORTHO05D008359 3.9e-111 405.2 275 76.0
FAN06G3280 Fragaria x ananassa HOM05D006631 ORTHO05D008359 6.7e-111 404.4 277 74.0
Lj1g0014889 Lotus japonicus HOM05D006631 ORTHO05D008359 6.7e-111 404.4 275 76.0
Glyma.03G259400 Glycine max HOM05D006631 ORTHO05D008359 1.1e-110 403.7 278 77.3
Haze_15698 Corylus avellana HOM05D006631 ORTHO05D008359 5.7e-110 401.4 200 97.5
Glyma.19G258300 Glycine max HOM05D006631 ORTHO05D008359 7.4e-110 401.0 278 76.3
Atru.chr5.731 Acer truncatum HOM05D006631 ORTHO05D008359 4.8e-109 398.3 276 75.0
MD01G1086200 Malus domestica HOM05D006631 ORTHO05D008359 1.4e-108 396.7 274 74.8
Cpa.g.sc144.12 Carica papaya HOM05D006631 ORTHO05D008359 1.8e-108 396.4 273 72.9
TAR375G0108 Trochodendron aralioides HOM05D006631 ORTHO05D008359 1.8e-108 396.4 276 75.0
Psat3g001400 Pisum sativum HOM05D006631 ORTHO05D008359 7.0e-108 394.4 276 74.3
CANSAT56G2365 Cannabis sativa HOM05D006631 ORTHO05D008359 2.0e-107 392.9 279 71.7
Solyc01g096240.4 Solanum lycopersicum HOM05D006631 ORTHO05D008359 4.5e-107 391.7 280 73.2
Phvul.006G115700 Phaseolus vulgaris HOM05D006631 ORTHO05D008359 5.9e-107 391.3 278 74.1
ClCG05G000610 Citrullus lanatus HOM05D006631 ORTHO05D008359 1.0e-106 390.6 273 72.2
Nn1g00373 Nelumbo nucifera HOM05D006631 ORTHO05D008359 1.0e-106 390.6 279 73.8
PGSC0003DMG400000125 Solanum tuberosum HOM05D006631 ORTHO05D008359 1.3e-106 390.2 280 73.2
Actinidia28101 Actinidia chinensis HOM05D006631 ORTHO05D008359 1.7e-106 389.8 274 74.1
Ca_09530_v3 Cicer arietinum L. HOM05D006631 ORTHO05D008359 1.7e-106 389.8 277 74.4
CSS0022670 Camellia sinensis var. sinensis HOM05D006631 ORTHO05D008359 2.9e-106 389.0 274 74.5
COL.COLO4_06257 Corchorus olitorius HOM05D006631 ORTHO05D008359 3.8e-106 388.7 261 77.0
Sopen01g040000 Solanum pennellii HOM05D006631 ORTHO05D008359 6.5e-106 387.9 280 72.1
CsaV3_3G007830 Cucumis sativus L. HOM05D006631 ORTHO05D008359 8.5e-106 387.5 273 72.5
THA.LOC104817387 Tarenaya hassleriana HOM05D006631 ORTHO05D008359 1.9e-105 386.3 278 70.9
Nitab4.5_0002527g0020 Nicotiana tabacum HOM05D006631 ORTHO05D008359 7.2e-105 384.4 282 72.3
Ciclev10021628m.g Citrus clementina HOM05D006631 ORTHO05D008359 2.1e-104 382.9 274 71.2
MELO3C005999.2 Cucumis melo HOM05D006631 ORTHO05D008359 6.7e-103 377.9 302 66.2
PSO063G1328 Papaver somniferum HOM05D006631 ORTHO05D008359 2.0e-102 376.3 286 68.2
PSO782G2421 Papaver somniferum HOM05D006631 ORTHO05D008359 5.7e-102 374.8 284 69.4
MSTRG.4800 Avicennia marina HOM05D006631 ORTHO05D008359 1.3e-101 373.6 277 71.1
Eucgr.D02642 Eucalyptus grandis HOM05D006631 ORTHO05D008359 1.3e-101 373.6 280 68.9
Medtr7g117970 Medicago truncatula HOM05D006631 ORTHO05D008359 1.7e-101 373.2 275 69.5
SalBow5G1997 Salvia bowleyana HOM05D006631 ORTHO05D008359 3.7e-101 372.1 279 70.3
arahy.Tifrunner.gnm1.ann1.NC261Q Arachis hypogaea HOM05D006631 ORTHO05D008359 4.8e-101 371.7 275 70.2
arahy.Tifrunner.gnm1.ann1.588I57 Arachis hypogaea HOM05D006631 ORTHO05D008359 6.3e-101 371.3 275 69.8
Phvul.010G116700 Phaseolus vulgaris HOM05D006631 ORTHO05D008359 1.1e-100 370.5 276 69.2
Lj9A602T26 Lonicera japonica HOM05D006631 ORTHO05D008359 3.1e-100 369.0 302 66.6
Hund16731 Selenicereus undatus HOM05D006631 ORTHO05D008359 3.1e-100 369.0 274 68.6
PGR031G0416 Punica granatum HOM05D006631 ORTHO05D008359 4.1e-100 368.6 274 70.1
ECA240G4795 Erigeron canadensis HOM05D006631 ORTHO05D008359 1.2e-99 367.1 274 69.7
Aa31LG10G15890 Aethionema arabicum HOM05D006631 ORTHO05D008359 3.5e-99 365.5 272 70.2
Rhsim01G0176500 Rhododendron simsii HOM05D006631 ORTHO05D008359 4.5e-99 365.2 283 68.6
Nitab4.5_0000307g0140 Nicotiana tabacum HOM05D006631 ORTHO05D008359 7.7e-99 364.4 269 72.5
Sabra14G0075400 Salix brachista HOM05D006631 ORTHO05D008359 7.7e-99 364.4 200 87.0
AUR62004534 Chenopodium quinoa HOM05D006631 ORTHO05D008359 1.0e-98 364.0 279 67.7
AL5G44450 Arabidopsis lyrata HOM05D006631 ORTHO05D008359 3.8e-98 362.1 229 76.9
TPR.G4790 Trifolium pratense HOM05D006631 ORTHO05D008359 1.5e-97 360.1 282 68.8
Glyma.16G021600 Glycine max HOM05D006631 ORTHO05D008359 2.5e-97 359.4 277 69.3
Migut.N01525 Erythranthe guttata HOM05D006631 ORTHO05D008359 3.2e-97 359.0 254 69.7
AUR62022720 Chenopodium quinoa HOM05D006631 ORTHO05D008359 7.2e-97 357.8 282 66.7
AT3G61870 Arabidopsis thaliana HOM05D006631 ORTHO05D008359 6.1e-96 354.8 229 74.7
FAN03G0022 Fragaria x ananassa HOM05D006631 ORTHO05D008359 1.0e-95 354.0 265 68.7
Carub.0005s2861 Capsella rubella HOM05D006631 ORTHO05D008359 1.4e-95 353.6 229 74.2
MBI04_g33414_MAGBIO Magnolia biondii HOM05D006631 ORTHO05D008359 1.4e-95 353.6 304 64.5
MSTRG.28278 Avicennia marina HOM05D006631 ORTHO05D008359 2.3e-95 352.8 237 75.1
Thhalv10006166m.g Eutrema salsugineum HOM05D006631 ORTHO05D008359 2.3e-95 352.8 229 74.7
Sp5g01490 Schrenkiella parvula HOM05D006631 ORTHO05D008359 3.0e-95 352.4 279 64.9
C08p36710 Brassica napus HOM05D006631 ORTHO05D008359 6.7e-95 351.3 230 73.5
BolC8t51253H Brassica oleracea HOM05D006631 ORTHO05D008359 6.7e-95 351.3 230 73.5
CARHR172210 Cardamine hirsuta HOM05D006631 ORTHO05D008359 1.2e-94 350.5 280 65.4
Lsat_1_v5_gn_3_141021 Lactuca sativa HOM05D006631 ORTHO05D008359 2.0e-94 349.7 275 68.0
Peaxi162Scf00767g00111 Petunia axillaris HOM05D006631 ORTHO05D008359 2.0e-94 349.7 201 84.1
CAN.G1415.2 Capsicum annuum HOM05D006631 ORTHO05D008359 2.6e-94 349.4 201 84.1
FAN10G3243 Fragaria x ananassa HOM05D006631 ORTHO05D008359 4.4e-94 348.6 200 83.0
A09p53900 Brassica napus HOM05D006631 ORTHO05D008359 5.7e-94 348.2 228 73.7
BraA09t40806Z Brassica rapa HOM05D006631 ORTHO05D008359 5.7e-94 348.2 228 73.7
FAN01G0947 Fragaria x ananassa HOM05D006631 ORTHO05D008359 7.5e-94 347.8 268 67.2
VMungo0540G1103 Vigna mungo HOM05D006631 ORTHO05D008359 3.1e-92 342.4 203 83.3
VMungo0331G0918 Vigna mungo HOM05D006631 ORTHO05D008359 4.1e-92 342.0 233 71.7
HanXRQChr03g0094051 Helianthus annuus HOM05D006631 ORTHO05D008359 5.3e-92 341.7 288 64.9
vmacro12589 Vaccinium macrocarpon HOM05D006631 ORTHO05D008359 3.5e-91 339.0 207 81.2
Lalb_Chr17g0342841 Lupinus albus HOM05D006631 ORTHO05D008359 5.0e-90 335.1 275 62.9
Ah.05g179220 Amaranthus hybridus HOM05D006631 ORTHO05D008359 6.5e-90 334.7 279 63.4
Sed0011774 Sechium edule HOM05D006631 ORTHO05D008359 2.5e-89 332.8 273 66.3
HPP92_002500 Vanilla planifolia HOM05D006631 ORTHO05D008359 3.2e-89 332.4 281 65.5
ATR0620G070 Amborella trichopoda HOM05D006631 ORTHO05D008359 4.2e-89 332.0 247 67.6
Sc23g0001960 Simmondsia chinensis HOM05D006631 ORTHO05D008359 3.4e-86 322.4 202 77.2
CDE07G1250 Ceratophyllum demersum HOM05D006631 ORTHO05D008359 5.7e-86 321.6 217 74.2
SEGI_25065 Sequoiadendron giganteum HOM05D006631 ORTHO05D008359 1.7e-85 320.1 224 70.1
FAN10G2512 Fragaria x ananassa HOM05D006631 ORTHO05D008359 3.3e-81 305.8 277 61.4
Os02g0122500 Oryza sativa ssp. japonica HOM05D006631 ORTHO05D008359 7.2e-81 304.7 218 70.2
Oeu007870.1 Olea europaea HOM05D006631 ORTHO05D008359 6.1e-80 301.6 178 82.6
BcaC07g42601 Brassica carinata HOM05D006631 ORTHO05D008359 7.5e-78 294.7 230 64.3
SMO143G0155 Selaginella moellendorffii HOM05D006631 ORTHO05D008359 2.2e-77 293.1 199 71.9
Mapoly0049s0137 Marchantia polymorpha HOM05D006631 ORTHO05D008359 1.9e-73 280.0 221 64.3
arahy.Tifrunner.gnm1.ann1.S1C8P4 Arachis hypogaea HOM05D006631 ORTHO05D008359 2.1e-72 276.6 281 56.2
Pp3c5_3210 Physcomitrium patens HOM05D006631 ORTHO05D008359 8.0e-72 274.6 220 64.5
EL10Ac1g00220 Beta vulgaris HOM05D006631 ORTHO05D008359 5.8e-70 268.5 219 64.4
arahy.Tifrunner.gnm1.ann1.GG2XE6 Arachis hypogaea HOM05D006631 ORTHO05D008359 7.5e-70 268.1 240 61.2
MD07G1155100 Malus domestica HOM05D006631 ORTHO05D008359 1.7e-69 266.9 155 83.2
DCAR_008654 Daucus carota HOM05D006631 ORTHO05D008359 2.2e-69 266.5 215 63.3
CBR_g37545 Chara braunii HOM05D006631 ORTHO05D008359 9.2e-68 261.2 198 66.7
SGA_v2.0_scaffold581G53044 Striga asiatica HOM05D006631 ORTHO05D008359 1.1e-65 254.2 156 77.6
MCO07G366 Micromonas commoda HOM05D006631 ORTHO05D008359 1.5e-62 243.8 288 49.7
Cc02_g39740 Coffea canephora HOM05D006631 ORTHO05D008359 3.4e-62 242.7 202 60.9
CDE09G1080 Ceratophyllum demersum HOM05D006631 ORTHO05D008359 6.4e-61 238.4 270 49.6
Cre12.g519300 Chlamydomonas reinhardtii HOM05D006631 ORTHO05D008359 1.6e-59 233.8 218 57.8
PRCOL_00004956 Prasinoderma coloniale HOM05D006631 ORTHO05D008359 3.0e-50 203.0 222 47.3
CSS0025910 Camellia sinensis var. sinensis HOM05D006631 ORTHO05D008359 3.3e-49 199.5 116 81.0
unitig_8.g3405 Utricularia gibba HOM05D006631 ORTHO05D008359 1.7e-42 177.2 173 57.8
TAR374G1086 Trochodendron aralioides HOM05D000482 ORTHO05D000349 1.5e-41 174.1 199 51.3
AagrBONN_evm.TU.Sc2ySwM_362.2495 Anthoceros agrestis HOM05D006631 ORTHO05D008359 2.5e-41 173.3 111 73.9
TAR374G0170 Trochodendron aralioides HOM05D000482 ORTHO05D000349 1.0e-26 124.8 81 71.6
TAR374G1450 Trochodendron aralioides HOM05D000482 ORTHO05D000349 7.4e-25 118.6 116 57.8
unitig_22.g6820 Utricularia gibba HOM05D006631 ORTHO05D008359 7.4e-09 65.5 61 59.0
GSVIVG01001070001 Vitis vinifera HOM05D006631 ORTHO05D008359 1.1e-07 61.6 34 82.4
Prupe.6G248300 Prunus persica HOM05D006631 ORTHO05D334351 5.9e-06 55.8 44 65.9


User provided reference genes

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