Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa003709 Carpinus fangiana HOM05D006867 ORTHO05D008676 0.0e+00 1160.2 616 100.0
Haze_15774 Corylus avellana HOM05D006867 ORTHO05D008676 0.0e+00 1121.3 613 93.3
QL08p048171 Quercus lobata HOM05D006867 ORTHO05D008676 1.4e-249 866.3 638 75.4
CiPaw.02G046400 Carya illinoinensis HOM05D006867 ORTHO05D008676 2.4e-249 865.5 642 74.1
Potri.002G183500 Populus trichocarpa HOM05D006867 ORTHO05D008676 4.4e-219 765.0 641 66.3
Potri.014G109500 Populus trichocarpa HOM05D006867 ORTHO05D008676 1.3e-218 763.5 633 66.8
Sabra14G0080800 Salix brachista HOM05D006867 ORTHO05D008676 2.9e-218 762.3 627 66.8
Manes.01G237400 Manihot esculenta HOM05D006867 ORTHO05D008676 7.1e-217 757.7 633 67.0
GSVIVG01027485001 Vitis vinifera HOM05D006867 ORTHO05D008676 1.2e-216 756.9 571 68.7
COL.COLO4_23081 Corchorus olitorius HOM05D006867 ORTHO05D008676 2.1e-216 756.1 635 67.4
Thecc.01G329400 Theobroma cacao HOM05D006867 ORTHO05D008676 2.1e-216 756.1 635 65.7
Prupe.2G203900 Prunus persica HOM05D006867 ORTHO05D008676 2.3e-215 752.7 620 66.3
Dinv32661 Davidia involucrata HOM05D006867 ORTHO05D008676 1.6e-213 746.5 646 66.3
Actinidia08011 Actinidia chinensis HOM05D006867 ORTHO05D008676 8.1e-213 744.2 633 62.9
Atru.chr5.813 Acer truncatum HOM05D006867 ORTHO05D008676 5.2e-212 741.5 635 65.4
Ciclev10019260m.g Citrus clementina HOM05D006867 ORTHO05D008676 2.6e-211 739.2 634 64.2
Sed0008932 Sechium edule HOM05D006867 ORTHO05D008676 1.3e-210 736.9 626 64.5
Sabra02G0132100 Salix brachista HOM05D006867 ORTHO05D008676 1.6e-208 729.9 636 64.8
CANSAT56G0208 Cannabis sativa HOM05D006867 ORTHO05D008676 3.0e-207 725.7 635 62.8
Gohir.A12G118400 Gossypium hirsutum HOM05D006867 ORTHO05D008676 3.0e-207 725.7 624 65.2
Gohir.D12G122200 Gossypium hirsutum HOM05D006867 ORTHO05D008676 3.0e-207 725.7 624 64.4
CsaV3_3G007140 Cucumis sativus L. HOM05D006867 ORTHO05D008676 1.5e-206 723.4 627 63.0
CANSAT56G2490 Cannabis sativa HOM05D006867 ORTHO05D008676 2.5e-206 722.6 635 62.7
Gorai.008G133000 Gossypium raimondii HOM05D006867 ORTHO05D008676 6.2e-205 718.0 624 64.6
Glyma.16G015800 Glycine max HOM05D006867 ORTHO05D008676 1.2e-203 713.8 629 64.7
ClCG05G000080 Citrullus lanatus HOM05D006867 ORTHO05D008676 1.5e-203 713.4 564 67.7
VMungo0331G1883 Vigna mungo HOM05D006867 ORTHO05D008676 1.5e-203 713.4 631 64.3
Cc00_g15760 Coffea canephora HOM05D006867 ORTHO05D008676 7.6e-203 711.1 640 60.8
Phvul.010G121700 Phaseolus vulgaris HOM05D006867 ORTHO05D008676 9.9e-203 710.7 632 63.1
Glyma.07G047300 Glycine max HOM05D006867 ORTHO05D008676 1.3e-202 710.3 626 63.6
arahy.Tifrunner.gnm1.ann1.L7530T Arachis hypogaea HOM05D006867 ORTHO05D008676 6.4e-202 708.0 657 61.3
Lalb_Chr10g0101011 Lupinus albus HOM05D006867 ORTHO05D008676 8.4e-202 707.6 635 64.6
FAN06G0390 Fragaria x ananassa HOM05D006867 ORTHO05D008676 1.1e-201 707.2 625 62.9
RcHm_v2.0_Chr1g0361851 Rosa chinensis HOM05D006867 ORTHO05D008676 4.2e-201 705.3 630 63.5
arahy.Tifrunner.gnm1.ann1.Y7T28V Arachis hypogaea HOM05D006867 ORTHO05D008676 7.1e-201 704.5 657 61.0
MD07G1165200 Malus domestica HOM05D006867 ORTHO05D008676 1.6e-200 703.4 620 61.5
FvH4_7g18270 Fragaria vesca HOM05D006867 ORTHO05D008676 3.5e-200 702.2 626 64.4
FAN06G3784 Fragaria x ananassa HOM05D006867 ORTHO05D008676 3.5e-200 702.2 626 64.5
Lj3g0022605 Lotus japonicus HOM05D006867 ORTHO05D008676 6.0e-200 701.4 631 62.6
Lj9A610G56 Lonicera japonica HOM05D006867 ORTHO05D008676 3.0e-199 699.1 646 59.4
Lalb_Chr17g0343131 Lupinus albus HOM05D006867 ORTHO05D008676 8.7e-199 697.6 645 61.7
vmacro08516 Vaccinium macrocarpon HOM05D006867 ORTHO05D008676 4.3e-198 695.3 678 58.7
Ca_23461_v3 Cicer arietinum L. HOM05D006867 ORTHO05D008676 2.4e-196 689.5 636 62.9
Ca_23474_v3 Cicer arietinum L. HOM05D006867 ORTHO05D008676 2.4e-196 689.5 636 62.9
TAR629G2918 Trochodendron aralioides HOM05D006867 ORTHO05D008676 2.4e-196 689.5 632 61.1
Nitab4.5_0004754g0040 Nicotiana tabacum HOM05D006867 ORTHO05D008676 5.3e-196 688.3 634 59.0
THA.LOC104817409 Tarenaya hassleriana HOM05D006867 ORTHO05D008676 1.5e-195 686.8 633 58.9
CAN.G90.6 Capsicum annuum HOM05D006867 ORTHO05D008676 4.4e-195 685.3 629 60.1
FAN10G4369 Fragaria x ananassa HOM05D006867 ORTHO05D008676 7.6e-195 684.5 632 63.3
MD01G1098500 Malus domestica HOM05D006867 ORTHO05D008676 2.2e-194 682.9 621 60.9
FAN10G3600 Fragaria x ananassa HOM05D006867 ORTHO05D008676 1.4e-193 680.2 631 63.2
TPR.G32787 Trifolium pratense HOM05D006867 ORTHO05D008676 1.4e-193 680.2 625 61.9
FAN01G1143 Fragaria x ananassa HOM05D006867 ORTHO05D008676 1.9e-193 679.9 515 65.8
FAN03G0961 Fragaria x ananassa HOM05D006867 ORTHO05D008676 1.9e-193 679.9 515 65.8
MBI11_g13783_MAGBIO Magnolia biondii HOM05D006867 ORTHO05D008676 1.9e-193 679.9 630 58.1
Medtr8g023750 Medicago truncatula HOM05D006867 ORTHO05D008676 1.6e-192 676.8 625 61.9
Oeu032684.1 Olea europaea HOM05D006867 ORTHO05D008676 7.9e-192 674.5 645 57.8
Eucgr.L00743 Eucalyptus grandis HOM05D006867 ORTHO05D008676 1.0e-191 674.1 636 61.5
Sopen08g006420 Solanum pennellii HOM05D006867 ORTHO05D008676 2.3e-191 672.9 467 70.0
Nitab4.5_0000348g0180 Nicotiana tabacum HOM05D006867 ORTHO05D008676 4.3e-190 668.7 641 58.7
Aa31LG1G28260 Aethionema arabicum HOM05D006867 ORTHO05D008676 1.3e-189 667.2 628 60.2
Psat0s2980g0160 Pisum sativum HOM05D006867 ORTHO05D008676 1.3e-189 667.2 631 60.7
Migut.I01214 Erythranthe guttata HOM05D006867 ORTHO05D008676 3.4e-187 659.1 662 55.7
Aqoxy5G04385 Aquilegia oxysepala HOM05D006867 ORTHO05D008676 5.8e-187 658.3 631 59.6
Sc08g0001320 Simmondsia chinensis HOM05D006867 ORTHO05D008676 5.8e-187 658.3 624 57.1
EL10Ac9g22256 Beta vulgaris HOM05D006867 ORTHO05D008676 1.7e-186 656.8 628 57.3
HanXRQChr15g0480381 Helianthus annuus HOM05D006867 ORTHO05D008676 2.2e-186 656.4 467 67.2
Sp4g28920 Schrenkiella parvula HOM05D006867 ORTHO05D008676 1.4e-185 653.7 640 58.9
Rhsim04G0175800 Rhododendron simsii HOM05D006867 ORTHO05D008676 2.7e-184 649.4 599 58.1
TWI59G0124 Tripterygium wilfordii HOM05D006867 ORTHO05D008676 4.6e-184 648.7 640 57.8
Hund00158 Selenicereus undatus HOM05D006867 ORTHO05D008676 7.9e-184 647.9 475 66.7
Lsat_1_v5_gn_3_39660 Lactuca sativa HOM05D006867 ORTHO05D008676 1.0e-183 647.5 656 56.4
MSTRG.10869 Avicennia marina HOM05D006867 ORTHO05D008676 1.3e-183 647.1 476 67.0
Thhalv10001357m.g Eutrema salsugineum HOM05D006867 ORTHO05D008676 1.8e-183 646.7 638 60.5
AL4G46360 Arabidopsis lyrata HOM05D006867 ORTHO05D008676 8.7e-183 644.4 630 59.2
PSO782G1247 Papaver somniferum HOM05D006867 ORTHO05D008676 1.9e-182 643.3 645 57.4
Carub.0004s2962 Capsella rubella HOM05D006867 ORTHO05D008676 7.4e-182 641.3 628 60.0
HanXRQChr17g0542101 Helianthus annuus HOM05D006867 ORTHO05D008676 1.6e-181 640.2 634 54.7
ATR0824G236 Amborella trichopoda HOM05D006867 ORTHO05D008676 2.4e-180 636.3 629 54.8
AUR62039056 Chenopodium quinoa HOM05D006867 ORTHO05D008676 6.9e-180 634.8 628 55.9
SalBow6G1414 Salvia bowleyana HOM05D006867 ORTHO05D008676 6.9e-180 634.8 646 53.6
Ah.01g010880 Amaranthus hybridus HOM05D006867 ORTHO05D008676 2.0e-179 633.3 630 55.4
FAN01G0521 Fragaria x ananassa HOM05D006867 ORTHO05D008676 1.3e-178 630.6 447 67.8
AUR62010330 Chenopodium quinoa HOM05D006867 ORTHO05D008676 2.2e-178 629.8 629 55.8
SGA_v2.0_scaffold122G33256 Striga asiatica HOM05D006867 ORTHO05D008676 7.1e-177 624.8 597 58.1
CARHR142250 Cardamine hirsuta HOM05D006867 ORTHO05D008676 1.2e-176 624.0 625 57.8
Hma1.2p1_0074F.1_g039020 Hydrangea macrophylla HOM05D006867 ORTHO05D008676 6.7e-175 618.2 418 71.5
AT2G46900 Arabidopsis thaliana HOM05D006867 ORTHO05D008676 7.4e-174 614.8 633 56.2
HPP92_013529 Vanilla planifolia HOM05D006867 ORTHO05D008676 3.7e-173 612.5 624 53.2
A05p00940 Brassica napus HOM05D006867 ORTHO05D008676 1.1e-172 610.9 627 57.6
BolC4t21761H Brassica oleracea HOM05D006867 ORTHO05D008676 1.2e-168 597.4 629 56.4
CSS0030251 Camellia sinensis var. sinensis HOM05D006867 ORTHO05D008676 1.2e-168 597.4 554 60.1
C04p01080 Brassica napus HOM05D006867 ORTHO05D008676 3.3e-166 589.3 623 56.3
ECA246G2438 Erigeron canadensis HOM05D006867 ORTHO05D008676 1.7e-162 577.0 490 59.6
Os09g0514900 Oryza sativa ssp. japonica HOM05D006867 ORTHO05D008676 4.2e-161 572.4 586 52.9
Zm00001eb102740 Zea mays HOM05D006867 ORTHO05D008676 4.6e-160 568.9 628 51.6
DCAR_022120 Daucus carota HOM05D006867 ORTHO05D008676 2.2e-157 560.1 632 51.3
Peaxi162Scf01205g00180 Petunia axillaris HOM05D006867 ORTHO05D008676 1.4e-153 547.4 387 67.2
Cpa.g.sc1043.2 Carica papaya HOM05D006867 ORTHO05D008676 2.2e-149 533.5 346 73.4
MELO3C005936.2 Cucumis melo HOM05D006867 ORTHO05D008676 2.0e-147 526.9 339 75.2
BcaC02g12633 Brassica carinata HOM05D006867 ORTHO05D008676 8.8e-143 511.5 638 50.6
CDE09G1372 Ceratophyllum demersum HOM05D006867 ORTHO05D008676 2.9e-122 443.4 442 53.8
Pp3c1_12740 Physcomitrium patens HOM05D006867 ORTHO05D008676 8.0e-120 435.3 523 45.1
SMO331G0055 Selaginella moellendorffii HOM05D006867 ORTHO05D008676 1.1e-113 414.8 469 46.7
AagrBONN_evm.TU.Sc2ySwM_344.4360 Anthoceros agrestis HOM05D006867 ORTHO05D008676 7.3e-113 412.1 422 49.3
Mapoly0002s0219 Marchantia polymorpha HOM05D006867 ORTHO05D008676 3.2e-108 396.7 485 44.7
Pp3c11_2510 Physcomitrium patens HOM05D006867 ORTHO05D008676 3.9e-106 389.8 582 41.1
CBR_g36359 Chara braunii HOM05D006867 ORTHO05D008676 8.7e-82 308.9 677 31.5
Cre11.g467639 Chlamydomonas reinhardtii HOM05D006867 ORTHO05D008676 5.3e-79 299.7 523 36.1
PRCOL_00004033 Prasinoderma coloniale HOM05D006867 ORTHO05D008676 4.5e-62 243.4 540 32.2
MCO10G037 Micromonas commoda HOM05D006867 ORTHO05D008676 1.7e-48 198.4 531 28.1
Solyc08g016090.4 Solanum lycopersicum HOM05D006867 ORTHO05D008676 7.2e-44 183.0 406 32.0
C04p72500 Brassica napus HOM05D006867 ORTHO05D008676 2.0e-25 121.7 98 59.2
BolC4t28738H Brassica oleracea HOM05D006867 ORTHO05D008676 2.0e-25 121.7 98 59.2
A04p34720 Brassica napus HOM05D006867 ORTHO05D008676 1.1e-23 115.9 98 57.1
Cfa022788 Carpinus fangiana HOM05D006867 ORTHO05D008676 2.7e-14 84.7 469 24.3


User provided reference genes

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