Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa003662 Carpinus fangiana HOM05D008072 ORTHO05D010204 2.1e-55 218.8 110 100.0
Haze_15831 Corylus avellana HOM05D008072 ORTHO05D010204 3.1e-22 108.6 139 51.8
Potri.001G188400 Populus trichocarpa HOM05D008072 ORTHO05D010204 1.5e-13 79.7 91 49.5
MD17G1186400 Malus domestica HOM05D008072 ORTHO05D010204 2.9e-12 75.5 92 50.0
QL05p020523 Quercus lobata HOM05D008072 ORTHO05D010204 1.1e-11 73.6 90 52.2
Dinv37992 Davidia involucrata HOM05D008072 ORTHO05D010204 1.4e-11 73.2 91 52.7
RcHm_v2.0_Chr2g0140071 Rosa chinensis HOM05D008072 ORTHO05D010204 3.2e-11 72.0 93 49.5
Prupe.3G061100 Prunus persica HOM05D008072 ORTHO05D010204 4.2e-11 71.6 91 49.5
CSS0040470 Camellia sinensis var. sinensis HOM05D008072 ORTHO05D010204 1.2e-10 70.1 96 47.9
Duzib192G0771 Durio zibethinus HOM05D008072 ORTHO05D010204 1.2e-10 70.1 97 42.3
FAN14G4057 Fragaria x ananassa HOM05D008072 ORTHO05D010204 1.2e-10 70.1 91 47.3
Sabra01G0152600 Salix brachista HOM05D008072 ORTHO05D010204 1.2e-10 70.1 92 47.8
Aqoxy7G01464 Aquilegia oxysepala HOM05D008072 ORTHO05D010204 2.1e-10 69.3 92 47.8
PGR102G0255 Punica granatum HOM05D008072 ORTHO05D010204 7.8e-10 67.4 99 45.5
Rhsim12G0202400 Rhododendron simsii HOM05D008072 ORTHO05D010204 7.8e-10 67.4 91 47.3
TAR626G1017 Trochodendron aralioides HOM05D008072 ORTHO05D010204 7.8e-10 67.4 90 47.8
Actinidia09003 Actinidia chinensis HOM05D008072 ORTHO05D010204 1.0e-09 67.0 92 44.6
FAN05G4246 Fragaria x ananassa HOM05D008072 ORTHO05D010204 1.0e-09 67.0 91 45.1
FvH4_6g32180 Fragaria vesca HOM05D008072 ORTHO05D010204 1.7e-09 66.2 91 45.1
Cc04_g02690 Coffea canephora HOM05D008072 ORTHO05D010204 3.0e-09 65.5 91 40.7
FAN02G2294 Fragaria x ananassa HOM05D008072 ORTHO05D010204 3.0e-09 65.5 91 46.2
Oeu060494.1 Olea europaea HOM05D008072 ORTHO05D010204 5.1e-09 64.7 91 45.1
FAN09G3706 Fragaria x ananassa HOM05D008072 ORTHO05D010204 6.6e-09 64.3 91 44.0
Ciclev10026797m.g Citrus clementina HOM05D008072 ORTHO05D010204 8.7e-09 63.9 91 46.2
Nn8g39117 Nelumbo nucifera HOM05D008072 ORTHO05D010204 8.7e-09 63.9 90 44.4
GSVIVG01017012001 Vitis vinifera HOM05D008072 ORTHO05D010204 1.1e-08 63.5 91 45.1
Peaxi162Scf00038g00843 Petunia axillaris HOM05D008072 ORTHO05D010204 1.5e-08 63.2 94 43.6
Hma1.2p1_3269F.1_g334750 Hydrangea macrophylla HOM05D008072 ORTHO05D010204 3.3e-08 62.0 96 41.7
Thecc.06G097600 Theobroma cacao HOM05D008072 ORTHO05D010204 1.6e-07 59.7 96 46.9
Nn2g11609 Nelumbo nucifera HOM05D008072 ORTHO05D010204 3.6e-07 58.5 116 38.8
Atru.chr1.3499 Acer truncatum HOM05D008072 ORTHO05D010204 6.2e-07 57.8 101 45.5
CANSAT56G4142 Cannabis sativa HOM05D008072 ORTHO05D010204 3.1e-06 55.5 99 41.4
PGSC0003DMG400002533 Solanum tuberosum HOM05D008072 ORTHO05D010204 5.3e-06 54.7 100 38.0
TPR.G35014 Trifolium pratense HOM05D008072 ORTHO05D010204 5.3e-06 54.7 92 40.2
Lj3g0001751 Lotus japonicus HOM05D008072 ORTHO05D010204 6.9e-06 54.3 91 39.6
Sc10g0007210 Simmondsia chinensis HOM05D008072 ORTHO05D010204 9.0e-06 53.9 93 39.8
VMungo0331G2041 Vigna mungo HOM05D008072 ORTHO05D010204 9.0e-06 53.9 96 42.7


User provided reference genes

Program Settings