Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa003654 Carpinus fangiana HOM05D009126 ORTHO05D011285 2.1e-18 94.7 51 100.0
Cfa014130 Carpinus fangiana HOM05D009126 ORTHO05D011285 1.6e-13 78.6 44 95.5
CiPaw.07G134400 Carya illinoinensis HOM05D009126 ORTHO05D011285 3.3e-11 70.9 48 81.2
Thecc.08G064400 Theobroma cacao HOM05D009126 ORTHO05D011285 2.1e-10 68.2 47 74.5
CSS0000199 Camellia sinensis var. sinensis HOM05D009126 ORTHO05D011285 2.4e-09 64.7 53 67.9
Hma1.2p1_0699F.1_g205690 Hydrangea macrophylla HOM05D009126 ORTHO05D011285 5.3e-09 63.5 49 67.3
Rhsim06G0003900 Rhododendron simsii HOM05D009126 ORTHO05D011285 6.9e-09 63.2 40 77.5
ClCG11G018970 Citrullus lanatus HOM05D009126 ORTHO05D011285 1.5e-08 62.0 37 81.1
Ciclev10003083m.g Citrus clementina HOM05D009126 ORTHO05D011285 1.5e-08 62.0 44 68.2
CiPaw.08G076800 Carya illinoinensis HOM05D009126 ORTHO05D011285 2.6e-08 61.2 43 74.4
Manes.18G002601 Manihot esculenta HOM05D009126 ORTHO05D011285 9.9e-08 59.3 41 75.6
Aa31sc158G30 Aethionema arabicum HOM05D009126 ORTHO05D011285 1.3e-07 58.9 42 76.2
QL07p035122 Quercus lobata HOM05D009126 ORTHO05D011285 1.3e-07 58.9 39 74.4
vmacro21775 Vaccinium macrocarpon HOM05D009126 ORTHO05D011285 1.7e-07 58.5 37 75.7
Sed0014859 Sechium edule HOM05D009126 ORTHO05D011285 2.2e-07 58.2 37 73.0
Carub.0005s1498 Capsella rubella HOM05D009126 ORTHO05D011285 2.9e-07 57.8 43 67.4
Solyc01g088040.3 Solanum lycopersicum HOM05D009126 ORTHO05D011285 3.8e-07 57.4 39 66.7
CsaV3_4G037570 Cucumis sativus L. HOM05D009126 ORTHO05D011285 4.9e-07 57.0 49 57.1
Atru.chr13.74 Acer truncatum HOM05D009126 ORTHO05D011285 1.1e-06 55.8 40 70.0
SGA_v2.0_scaffold54G19626 Striga asiatica HOM05D009126 ORTHO05D011285 1.9e-06 55.1 38 73.7
Lj3g0009895 Lotus japonicus HOM05D009126 ORTHO05D011285 3.2e-06 54.3 45 62.2
Migut.N02982 Erythranthe guttata HOM05D009126 ORTHO05D011285 5.4e-06 53.5 43 58.1
Migut.O00885 Erythranthe guttata HOM05D009126 ORTHO05D011285 5.4e-06 53.5 43 58.1


User provided reference genes

Program Settings