Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa003300 Carpinus fangiana HOM05D008391 ORTHO05D009743 7.6e-241 836.6 393 100.0
Cfa003301 Carpinus fangiana HOM05D008391 ORTHO05D009743 1.4e-141 506.9 394 69.0
Haze_14978 Corylus avellana HOM05D008391 ORTHO05D009743 5.2e-88 328.9 440 45.2
Haze_14914 Corylus avellana HOM05D008391 ORTHO05D009743 4.7e-57 226.1 374 38.2
Haze_02253 Corylus avellana HOM05D001291 ORTHO05D009743 1.1e-56 224.9 375 40.0
Haze_02263 Corylus avellana HOM05D008391 ORTHO05D009743 1.1e-56 224.9 375 40.0
Cfa007291 Carpinus fangiana HOM05D008391 ORTHO05D009743 5.4e-53 212.6 393 35.6
Cfa017030 Carpinus fangiana HOM05D008391 ORTHO05D009743 3.5e-52 209.9 332 37.0
Cfa019001 Carpinus fangiana HOM05D008391 ORTHO05D009743 4.6e-52 209.5 361 36.8
Haze_24274 Corylus avellana HOM05D008391 ORTHO05D009743 3.0e-51 206.8 330 43.0
Cfa007293 Carpinus fangiana HOM05D008391 ORTHO05D009743 3.9e-51 206.5 316 38.3
Cfa014784 Carpinus fangiana HOM05D008391 ORTHO05D009743 1.1e-48 198.4 363 35.8
Cfa007631 Carpinus fangiana HOM05D008391 ORTHO05D009743 1.4e-48 198.0 268 45.9
Haze_21168 Corylus avellana HOM05D008391 ORTHO05D009743 6.8e-48 195.7 361 35.5
Haze_02265 Corylus avellana HOM05D008391 ORTHO05D009743 4.4e-47 193.0 362 36.2
Haze_19280 Corylus avellana HOM05D008391 ORTHO05D009743 1.3e-46 191.4 407 33.2
Haze_19261 Corylus avellana HOM05D008391 ORTHO05D009743 1.4e-45 188.0 408 32.8
Haze_02255 Corylus avellana HOM05D008391 ORTHO05D009743 4.1e-45 186.4 390 34.6
Haze_02251 Corylus avellana HOM05D000722 ORTHO05D000590 6.0e-44 182.6 276 41.3
Cfa014727 Carpinus fangiana HOM05D008391 ORTHO05D009743 1.3e-43 181.4 361 34.1
Cfa021346 Carpinus fangiana HOM05D008391 ORTHO05D009743 1.5e-42 177.9 343 35.0
Haze_19937 Corylus avellana HOM05D008391 ORTHO05D009743 1.5e-42 177.9 338 33.1
Cfa012986 Carpinus fangiana HOM05D008391 ORTHO05D009743 6.2e-41 172.6 370 33.0
Cfa017076 Carpinus fangiana HOM05D008391 ORTHO05D009743 1.8e-40 171.0 335 34.6
Haze_19278 Corylus avellana HOM05D008391 ORTHO05D009743 1.8e-40 171.0 371 32.1
Cfa003685 Carpinus fangiana HOM05D008391 ORTHO05D009743 5.8e-39 166.0 367 35.1
Cfa005103 Carpinus fangiana HOM05D008391 ORTHO05D009743 5.8e-39 166.0 266 41.0
Haze_02259 Corylus avellana HOM05D000722 ORTHO05D000590 2.2e-38 164.1 281 38.8
Cfa007250 Carpinus fangiana HOM05D008391 ORTHO05D009743 6.4e-38 162.5 349 36.1
Cfa007135 Carpinus fangiana HOM05D008391 ORTHO05D009743 8.4e-38 162.2 226 42.5
Haze_14975 Corylus avellana HOM05D008391 ORTHO05D009743 1.9e-37 161.0 197 48.7
Cfa005104 Carpinus fangiana HOM05D008391 ORTHO05D009743 3.2e-37 160.2 357 31.9
Haze_19938 Corylus avellana HOM05D008391 ORTHO05D009743 1.6e-36 157.9 345 33.0
Haze_19712 Corylus avellana HOM05D008391 ORTHO05D009743 1.0e-35 155.2 358 32.7
Haze_19940 Corylus avellana HOM05D008391 ORTHO05D009743 2.1e-33 147.5 347 32.6
Cfa017604 Carpinus fangiana HOM05D005933 ORTHO05D007366 8.1e-33 145.6 322 32.9
Cfa003918 Carpinus fangiana HOM05D008391 ORTHO05D009743 1.8e-32 144.4 324 32.1
Haze_19844 Corylus avellana HOM05D027064 ORTHO05D009743 6.9e-32 142.5 390 29.7
Haze_14137 Corylus avellana HOM05D008391 ORTHO05D009743 1.2e-31 141.7 339 31.6
Cfa017751 Carpinus fangiana HOM05D008391 ORTHO05D009743 5.8e-31 139.4 314 32.2
Haze_19842 Corylus avellana HOM05D008391 ORTHO05D009743 9.9e-31 138.7 343 30.0
Cfa003917 Carpinus fangiana HOM05D008391 ORTHO05D009743 6.4e-30 136.0 322 32.0
Cfa015317 Carpinus fangiana HOM05D008391 ORTHO05D009743 4.2e-29 133.3 295 31.9
Cfa017042 Carpinus fangiana HOM05D008391 ORTHO05D009743 7.1e-29 132.5 359 30.6
Haze_15512 Corylus avellana HOM05D000163 ORTHO05D000962 2.1e-28 131.0 319 31.7
Cfa016887 Carpinus fangiana HOM05D008391 ORTHO05D009743 3.9e-27 126.7 259 34.0
Haze_13950 Corylus avellana HOM05D008391 ORTHO05D009743 5.1e-27 126.3 201 40.8
Haze_19708 Corylus avellana HOM05D008391 ORTHO05D009743 6.6e-27 125.9 302 31.5
Haze_13848 Corylus avellana HOM05D008391 ORTHO05D009743 4.3e-26 123.2 277 30.7
QL11p036388 Quercus lobata HOM05D010066 ORTHO05D009743 3.6e-25 120.2 285 31.9
QL11p050365 Quercus lobata HOM05D010066 ORTHO05D009743 1.1e-24 118.6 269 31.2
QL11p051711 Quercus lobata HOM05D010066 ORTHO05D009743 1.1e-24 118.6 383 26.9
QL11p019943 Quercus lobata HOM05D010066 ORTHO05D009743 6.9e-24 115.9 321 28.7
Cfa007193 Carpinus fangiana HOM05D008391 ORTHO05D009743 1.2e-23 115.2 375 28.8
QL11p050245 Quercus lobata HOM05D010066 ORTHO05D009743 2.0e-23 114.4 304 31.2
QL93p0284_0002 Quercus lobata HOM05D010066 ORTHO05D009743 2.0e-23 114.4 304 31.2
QL11p054840 Quercus lobata HOM05D000002 ORTHO05D000001 3.4e-23 113.6 262 32.4
QL11p036944 Quercus lobata HOM05D010066 ORTHO05D009743 5.8e-23 112.8 310 30.6
Haze_14976 Corylus avellana HOM05D001643 ORTHO05D001580 2.2e-22 110.9 181 39.2
QL11p045102 Quercus lobata HOM05D010066 ORTHO05D009743 2.2e-22 110.9 264 29.2
Haze_19703 Corylus avellana HOM05D008391 ORTHO05D009743 8.4e-22 109.0 215 33.0
QL11p036670 Quercus lobata HOM05D010066 ORTHO05D009743 8.4e-22 109.0 311 29.9
QL11p036893 Quercus lobata HOM05D010066 ORTHO05D009743 8.4e-22 109.0 311 29.9
Cfa016864 Carpinus fangiana HOM05D008391 ORTHO05D009743 1.4e-21 108.2 214 34.6
QL11p036882 Quercus lobata HOM05D010066 ORTHO05D009743 2.4e-21 107.5 311 29.6
QL01p003691 Quercus lobata HOM05D010066 ORTHO05D009743 5.4e-21 106.3 282 30.1
QL05p053761 Quercus lobata HOM05D010066 ORTHO05D016816 2.7e-20 104.0 315 27.0
QL11p056498 Quercus lobata HOM05D010066 ORTHO05D009743 1.0e-19 102.1 281 30.6
QL11p018809 Quercus lobata HOM05D041046 ORTHO05D021181 1.5e-18 98.2 340 27.9
Cfa016660 Carpinus fangiana HOM05D008391 ORTHO05D009743 5.6e-18 96.3 172 34.3
Cfa016866 Carpinus fangiana HOM05D027064 ORTHO05D009743 2.1e-17 94.4 285 30.5
QL11p038460 Quercus lobata HOM05D010066 ORTHO05D009743 2.8e-17 94.0 247 31.2
QL11p042465 Quercus lobata HOM05D025344 ORTHO05D009743 1.4e-16 91.7 321 26.5
Rhsim05G0013500 Rhododendron simsii HOM05D012885 ORTHO05D010877 2.4e-16 90.9 246 28.9
Cfa002005 Carpinus fangiana HOM05D003991 ORTHO05D009743 3.1e-16 90.5 332 28.0
CSS0033575 Camellia sinensis var. sinensis HOM05D013111 ORTHO05D010877 1.2e-15 88.6 317 29.3
QL09p047090 Quercus lobata HOM05D041046 ORTHO05D021181 7.6e-15 85.9 336 26.8
CSS0026782 Camellia sinensis var. sinensis HOM05D025100 ORTHO05D013046 1.4e-13 81.6 280 28.2
Cfa016758 Carpinus fangiana HOM05D008391 ORTHO05D009743 1.9e-13 81.3 118 43.2
QL11p054864 Quercus lobata HOM05D000003 ORTHO05D000007 9.3e-13 79.0 289 27.0
Cfa016865 Carpinus fangiana HOM05D027064 ORTHO05D009743 2.7e-12 77.4 244 29.5
CSS0008723 Camellia sinensis var. sinensis HOM05D010628 ORTHO05D010877 4.6e-12 76.6 297 26.3
Haze_19846 Corylus avellana HOM05D027064 ORTHO05D009743 4.6e-12 76.6 177 30.5
QL02p072942 Quercus lobata HOM05D025100 ORTHO05D010877 2.3e-11 74.3 281 26.7
Rhsim05G0014400 Rhododendron simsii HOM05D012885 ORTHO05D010877 3.0e-11 73.9 248 26.2
QL11p042411 Quercus lobata HOM05D025344 ORTHO05D009743 1.9e-10 71.2 254 27.2
QL02p073240 Quercus lobata HOM05D025100 ORTHO05D010877 5.6e-10 69.7 294 25.2
CSS0022125 Camellia sinensis var. sinensis HOM05D025536 ORTHO05D010877 7.4e-10 69.3 242 31.0
CSS0005117 Camellia sinensis var. sinensis HOM05D025536 ORTHO05D010877 1.3e-09 68.6 201 31.3
CSS0046102 Camellia sinensis var. sinensis HOM05D025536 ORTHO05D010877 1.6e-09 68.2 243 30.9
Rhsim06G0070500 Rhododendron simsii HOM05D018081 ORTHO05D026100 2.8e-09 67.4 332 23.2
COL.COLO4_29429 Corchorus olitorius HOM05D035412 ORTHO05D019051 4.8e-09 66.6 140 33.6
AL7G34820 Arabidopsis lyrata HOM05D000249 ORTHO05D000206 1.1e-08 65.5 222 25.2
Rhsim06G0067900 Rhododendron simsii HOM05D018081 ORTHO05D026100 1.1e-08 65.5 272 23.5
Dinv35654 Davidia involucrata HOM05D013363 ORTHO05D015094 1.8e-08 64.7 247 25.9
Rhsim03G0039300 Rhododendron simsii HOM05D018081 ORTHO05D010877 1.8e-08 64.7 276 27.5
Dinv28172 Davidia involucrata HOM05D011324 ORTHO05D013448 3.1e-08 63.9 126 34.1
QL11p050103 Quercus lobata HOM05D010066 ORTHO05D009743 4.0e-08 63.5 199 25.6
QL11p055392 Quercus lobata HOM05D010066 ORTHO05D009743 4.0e-08 63.5 120 35.0
COL.COLO4_29430 Corchorus olitorius HOM05D035412 ORTHO05D019051 5.3e-08 63.2 133 33.1
BolC9t59948H Brassica oleracea HOM05D000249 ORTHO05D000206 6.9e-08 62.8 199 28.6
Cfa012827 Carpinus fangiana HOM05D008391 ORTHO05D009743 6.9e-08 62.8 147 30.6
AT4G19330 Arabidopsis thaliana HOM05D000249 ORTHO05D000206 1.2e-07 62.0 140 27.9
AUR62039049 Chenopodium quinoa HOM05D038025 ORTHO05D012136 1.5e-07 61.6 199 28.6
A10p31350 Brassica napus HOM05D000249 ORTHO05D000206 3.4e-07 60.5 143 30.8
AUR62016894 Chenopodium quinoa HOM05D038025 ORTHO05D012136 3.4e-07 60.5 206 29.1
Carub.0007s2189 Capsella rubella HOM05D000249 ORTHO05D000206 7.6e-07 59.3 141 28.4
A01p00630 Brassica napus HOM05D000249 ORTHO05D000206 1.0e-06 58.9 130 32.3
BraA01t00071Z Brassica rapa HOM05D000249 ORTHO05D000206 1.0e-06 58.9 130 32.3
QL11p003079 Quercus lobata HOM05D010066 ORTHO05D010877 1.0e-06 58.9 205 26.3
AT4G19250 Arabidopsis thaliana HOM05D000249 ORTHO05D000206 1.3e-06 58.5 123 27.6
Thhalv10025324m.g Eutrema salsugineum HOM05D000249 ORTHO05D000206 2.2e-06 57.8 99 36.4
CiPaw.03G134300 Carya illinoinensis HOM05D000249 ORTHO05D000206 2.9e-06 57.4 95 36.8
C07p01540 Brassica napus HOM05D000249 ORTHO05D000206 3.8e-06 57.0 94 37.2
C05p04170 Brassica napus HOM05D000249 ORTHO05D000206 4.9e-06 56.6 101 34.7
BolC5t29192H Brassica oleracea HOM05D000249 ORTHO05D000206 4.9e-06 56.6 101 34.7
Dinv01717 Davidia involucrata HOM05D011324 ORTHO05D013448 4.9e-06 56.6 127 33.1
BcaC06g35639 Brassica carinata HOM05D000249 ORTHO05D000206 6.5e-06 56.2 94 36.2
BcaC06g35641 Brassica carinata HOM05D000249 ORTHO05D000206 6.5e-06 56.2 94 36.2
C07p12660 Brassica napus HOM05D000249 ORTHO05D000206 6.5e-06 56.2 94 36.2
C07p12690 Brassica napus HOM05D000249 ORTHO05D000206 6.5e-06 56.2 94 36.2
BolC7t41748H Brassica oleracea HOM05D000249 ORTHO05D000206 6.5e-06 56.2 94 36.2
AUR62016891 Chenopodium quinoa HOM05D038025 ORTHO05D012136 6.5e-06 56.2 131 31.3
Dinv35802 Davidia involucrata HOM05D013363 ORTHO05D015094 6.5e-06 56.2 106 34.9
Thecc.01G112800 Theobroma cacao HOM05D000249 ORTHO05D000206 6.5e-06 56.2 95 35.8
C09p72030 Brassica napus HOM05D000249 ORTHO05D000206 8.4e-06 55.8 102 33.3
Carub.0003s0535 Capsella rubella HOM05D000249 ORTHO05D014429 8.4e-06 55.8 97 36.1
Dinv28168 Davidia involucrata HOM05D011324 ORTHO05D013448 8.4e-06 55.8 77 39.0


User provided reference genes

Program Settings