Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa003266 Carpinus fangiana HOM05D001384 ORTHO05D001215 6.3e-36 153.7 83 100.0
Haze_25702 Corylus avellana HOM05D001384 ORTHO05D001215 2.7e-15 85.1 84 69.0
Haze_25705 Corylus avellana HOM05D001384 ORTHO05D001215 1.4e-14 82.8 84 67.9
Ciclev10010340m.g Citrus clementina HOM05D001384 ORTHO05D001215 7.7e-10 67.0 83 53.0
Potri.018G078801 Populus trichocarpa HOM05D001384 ORTHO05D001215 4.2e-08 61.2 83 53.0
Manes.03G019400 Manihot esculenta HOM05D001384 ORTHO05D001215 5.5e-08 60.8 80 48.8
Thecc.09G111900 Theobroma cacao HOM05D001384 ORTHO05D001215 1.2e-07 59.7 83 49.4
Lsat_1_v5_gn_8_95100 Lactuca sativa HOM05D001384 ORTHO05D001215 1.6e-07 59.3 79 51.9
HanXRQChr05g0138071 Helianthus annuus HOM05D001384 ORTHO05D001215 2.1e-07 58.9 80 50.0
Rhsim03G0243700 Rhododendron simsii HOM05D001384 ORTHO05D001215 8.0e-07 57.0 108 39.8
RcHm_v2.0_Chr2g0090651 Rosa chinensis HOM05D001384 ORTHO05D001215 8.0e-07 57.0 76 50.0
CiPaw.03G233000 Carya illinoinensis HOM05D001384 ORTHO05D001215 1.4e-06 56.2 83 48.2
Prupe.7G229500 Prunus persica HOM05D001384 ORTHO05D001215 1.4e-06 56.2 83 53.0
Atru.chr7.1336 Acer truncatum HOM05D001384 ORTHO05D001215 1.8e-06 55.8 80 47.5
EL10Ac8g18508 Beta vulgaris HOM05D001384 ORTHO05D001215 1.8e-06 55.8 80 46.2
Cc06_g09580 Coffea canephora HOM05D001384 ORTHO05D001215 1.8e-06 55.8 80 51.2
Sed0004504 Sechium edule HOM05D001384 ORTHO05D001215 1.8e-06 55.8 81 45.7
Gohir.D05G024100 Gossypium hirsutum HOM05D001384 ORTHO05D001215 2.3e-06 55.5 79 49.4
Manes.16G116900 Manihot esculenta HOM05D001384 ORTHO05D001215 2.3e-06 55.5 80 50.0
Gohir.A05G022600 Gossypium hirsutum HOM05D001384 ORTHO05D001215 5.2e-06 54.3 79 48.1
Gorai.009G024200 Gossypium raimondii HOM05D001384 ORTHO05D001215 5.2e-06 54.3 79 48.1
Oeu002227.1 Olea europaea HOM05D001384 ORTHO05D001215 5.2e-06 54.3 83 45.8
Nn2g11765 Nelumbo nucifera HOM05D001384 ORTHO05D001215 6.8e-06 53.9 83 45.8
CsaV3_2G002300 Cucumis sativus L. HOM05D001384 ORTHO05D001215 8.8e-06 53.5 83 43.4


User provided reference genes

Program Settings