Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa003263 Carpinus fangiana HOM05D008067 ORTHO05D010226 3.6e-36 154.5 81 100.0
Haze_25708 Corylus avellana HOM05D008067 ORTHO05D010226 9.8e-34 146.4 81 95.1
QL02p085507 Quercus lobata HOM05D008067 ORTHO05D010226 5.4e-24 114.0 80 77.5
COL.COLO4_34910 Corchorus olitorius HOM05D008067 ORTHO05D010226 3.5e-23 111.3 85 67.1
Thecc.09G111500 Theobroma cacao HOM05D008067 ORTHO05D010226 1.3e-22 109.4 81 72.8
TAR624G0725 Trochodendron aralioides HOM05D008067 ORTHO05D010226 3.0e-22 108.2 81 74.1
Gorai.010G070100 Gossypium raimondii HOM05D008067 ORTHO05D010226 3.3e-21 104.8 82 72.0
CiPaw.04G164800 Carya illinoinensis HOM05D008067 ORTHO05D010226 4.3e-21 104.4 82 73.2
Prupe.7G230000 Prunus persica HOM05D008067 ORTHO05D010226 7.3e-21 103.6 84 75.0
Gohir.D07G005400 Gossypium hirsutum HOM05D008067 ORTHO05D010226 4.7e-20 100.9 84 67.9
Gorai.001G004900 Gossypium raimondii HOM05D008067 ORTHO05D010226 4.7e-20 100.9 84 67.9
Gohir.A06G061900 Gossypium hirsutum HOM05D008067 ORTHO05D010226 1.1e-19 99.8 82 69.5
Gohir.A07G006600 Gossypium hirsutum HOM05D008067 ORTHO05D010226 1.1e-19 99.8 84 66.7
Gohir.D06G060201 Gossypium hirsutum HOM05D008067 ORTHO05D010226 3.1e-19 98.2 83 69.9
Ciclev10010044m.g Citrus clementina HOM05D008067 ORTHO05D010226 5.2e-19 97.4 89 66.3
MD02G1048100 Malus domestica HOM05D008067 ORTHO05D010226 6.8e-19 97.1 78 67.9
ClCG11G002490 Citrullus lanatus HOM05D008067 ORTHO05D010226 8.9e-19 96.7 77 71.4
Manes.03G019700 Manihot esculenta HOM05D008067 ORTHO05D010226 2.0e-18 95.5 84 70.2
Potri.018G079200 Populus trichocarpa HOM05D008067 ORTHO05D010226 2.0e-18 95.5 85 67.1
Sed0012648 Sechium edule HOM05D008067 ORTHO05D010226 3.4e-18 94.7 77 70.1
MELO3C004555.2 Cucumis melo HOM05D008067 ORTHO05D010226 7.5e-18 93.6 77 70.1
CSS0009961 Camellia sinensis var. sinensis HOM05D008067 ORTHO05D010226 1.3e-17 92.8 84 64.3
CSS0037112 Camellia sinensis var. sinensis HOM05D008067 ORTHO05D010226 1.3e-17 92.8 84 64.3
CsaV3_2G002290 Cucumis sativus L. HOM05D008067 ORTHO05D010226 2.2e-17 92.0 84 66.7
Sed0011788 Sechium edule HOM05D008067 ORTHO05D010226 1.1e-16 89.7 78 66.7
Atru.chr7.1341 Acer truncatum HOM05D008067 ORTHO05D010226 3.2e-16 88.2 88 64.8
CiPaw.03G232800 Carya illinoinensis HOM05D008067 ORTHO05D010226 3.5e-15 84.7 88 62.5
Aqoxy7G01692 Aquilegia oxysepala HOM05D008067 ORTHO05D010226 3.0e-14 81.6 91 57.1
Nn2g11761 Nelumbo nucifera HOM05D008067 ORTHO05D010226 3.9e-14 81.3 81 55.6
Nitab4.5_0003537g0010 Nicotiana tabacum HOM05D008067 ORTHO05D010226 6.6e-14 80.5 86 54.7
RcHm_v2.0_Chr2g0090561 Rosa chinensis HOM05D008067 ORTHO05D010226 1.1e-13 79.7 85 61.2
Peaxi162Scf00560g00114 Petunia axillaris HOM05D008067 ORTHO05D010226 2.5e-13 78.6 84 53.6
FAN28G1234 Fragaria x ananassa HOM05D008067 ORTHO05D010226 3.3e-13 78.2 83 57.8
Nn8g39208 Nelumbo nucifera HOM05D008067 ORTHO05D010226 4.3e-13 77.8 78 59.0
FvH4_1g04950 Fragaria vesca HOM05D008067 ORTHO05D010226 5.6e-13 77.4 83 60.2
PGSC0003DMG400000315 Solanum tuberosum HOM05D008067 ORTHO05D010226 1.2e-12 76.3 86 52.3
FAN23G0784 Fragaria x ananassa HOM05D008067 ORTHO05D010226 1.6e-12 75.9 83 59.0
Glyma.09G190000 Glycine max HOM05D008067 ORTHO05D010226 3.6e-12 74.7 78 59.0
TPR.G21702 Trifolium pratense HOM05D008067 ORTHO05D010226 4.7e-12 74.3 78 61.5
Lsat_1_v5_gn_8_95580 Lactuca sativa HOM05D008067 ORTHO05D010226 6.2e-12 73.9 93 49.5
TPR.G23486 Trifolium pratense HOM05D008067 ORTHO05D010226 6.2e-12 73.9 78 61.5
Glyma.07G086900 Glycine max HOM05D008067 ORTHO05D010226 8.1e-12 73.6 76 57.9
SHI02746 Sapria himalayana HOM05D008067 ORTHO05D010226 8.1e-12 73.6 71 57.7
Sopen12g003050 Solanum pennellii HOM05D008067 ORTHO05D010226 1.8e-11 72.4 90 47.8
Lj2g0006280 Lotus japonicus HOM05D008067 ORTHO05D010226 3.1e-11 71.6 79 54.4
Lalb_Chr05g0222841 Lupinus albus HOM05D008067 ORTHO05D010226 5.2e-11 70.9 73 54.8
DCAR_028716 Daucus carota HOM05D008067 ORTHO05D010226 6.8e-11 70.5 62 59.7
Lj4g0026171 Lotus japonicus HOM05D008067 ORTHO05D010226 6.8e-11 70.5 53 67.9
Medtr8g083450 Medicago truncatula HOM05D008067 ORTHO05D010226 8.9e-11 70.1 74 60.8
Phvul.004G162800 Phaseolus vulgaris HOM05D008067 ORTHO05D010226 8.9e-11 70.1 76 55.3
Solyc12g007060.1 Solanum lycopersicum HOM05D008067 ORTHO05D010226 1.5e-10 69.3 98 43.9
Ah.09g227900 Amaranthus hybridus HOM05D008067 ORTHO05D010226 2.0e-10 68.9 54 72.2
EL10Ac8g18505 Beta vulgaris HOM05D008067 ORTHO05D010226 3.4e-10 68.2 64 59.4
TAR636G2707 Trochodendron aralioides HOM05D003111 ORTHO05D003502 3.4e-10 68.2 68 54.4
CsaV3_1G030530 Cucumis sativus L. HOM05D008067 ORTHO05D010226 4.4e-10 67.8 76 53.9
Glyma.05G231500 Glycine max HOM05D008067 ORTHO05D010226 7.5e-10 67.0 64 57.8
Peaxi162Scf00546g00115 Petunia axillaris HOM05D008067 ORTHO05D010226 7.5e-10 67.0 67 62.7
HPP92_010803 Vanilla planifolia HOM05D008067 ORTHO05D010226 7.5e-10 67.0 81 49.4
Psat7g013560 Pisum sativum HOM05D008067 ORTHO05D010226 9.9e-10 66.6 78 57.7
Lalb_Chr22g0352831 Lupinus albus HOM05D008067 ORTHO05D010226 1.3e-09 66.2 81 56.8
RhsimUnG0085400 Rhododendron simsii HOM05D008067 ORTHO05D010226 1.3e-09 66.2 75 52.0
Glyma.08G039000 Glycine max HOM05D008067 ORTHO05D010226 2.2e-09 65.5 60 58.3
Sed0018150 Sechium edule HOM05D008067 ORTHO05D010226 2.9e-09 65.1 79 51.9
TPR.G35272 Trifolium pratense HOM05D003111 ORTHO05D003502 6.4e-09 63.9 63 55.6
Medtr6g086485 Medicago truncatula HOM05D008067 ORTHO05D010226 8.3e-09 63.5 83 48.2
Sed0018286 Sechium edule HOM05D008067 ORTHO05D010226 8.3e-09 63.5 84 48.8
Lj2g0013738 Lotus japonicus HOM05D008067 ORTHO05D010226 1.4e-08 62.8 62 59.7
Lj2g0025160 Lotus japonicus HOM05D008067 ORTHO05D010226 1.9e-08 62.4 79 50.6
Psat1g041240 Pisum sativum HOM05D008067 ORTHO05D010226 1.9e-08 62.4 82 47.6
Lj2g0022306 Lotus japonicus HOM05D008067 ORTHO05D010226 1.6e-07 59.3 79 50.6
PGR083G0815 Punica granatum HOM05D006736 ORTHO05D008459 1.6e-07 59.3 77 48.1
Phvul.002G313700 Phaseolus vulgaris HOM05D008067 ORTHO05D010226 1.0e-06 56.6 41 68.3
Dinv15222 Davidia involucrata HOM05D007247 ORTHO05D009208 5.1e-06 54.3 58 53.4
Migut.M00067 Erythranthe guttata HOM05D006736 ORTHO05D008459 5.1e-06 54.3 62 51.6
Thhalv10021795m.g Eutrema salsugineum HOM05D006736 ORTHO05D008459 5.1e-06 54.3 59 52.5
Sp3g11420 Schrenkiella parvula HOM05D006736 ORTHO05D008459 5.1e-06 54.3 70 47.1
CARHR087850 Cardamine hirsuta HOM05D006736 ORTHO05D008459 6.6e-06 53.9 58 50.0
SGA_v2.0_scaffold49G18393 Striga asiatica HOM05D006736 ORTHO05D008459 6.6e-06 53.9 73 46.6


User provided reference genes

Program Settings