Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa003219 Carpinus fangiana HOM05D009864 ORTHO05D010207 1.2e-62 243.0 129 100.0
Cfa012398 Carpinus fangiana HOM05D009864 ORTHO05D010207 3.5e-33 145.2 122 69.7
Cfa012385 Carpinus fangiana HOM05D009864 ORTHO05D010207 7.5e-28 127.5 123 65.0
Dinv00163 Davidia involucrata HOM05D009932 ORTHO05D010207 2.2e-19 99.4 121 44.6
CiPaw.04G127000 Carya illinoinensis HOM05D009864 ORTHO05D010207 1.1e-18 97.1 114 50.0
CiPaw.11G071500 Carya illinoinensis HOM05D009864 ORTHO05D010207 5.4e-18 94.7 130 48.5
Dinv25145 Davidia involucrata HOM05D009864 ORTHO05D010207 5.4e-18 94.7 136 41.9
CiPaw.11G071400 Carya illinoinensis HOM05D009864 ORTHO05D010207 1.6e-17 93.2 114 51.8
CiPaw.11G089000 Carya illinoinensis HOM05D009864 ORTHO05D010207 1.0e-16 90.5 99 51.5
CiPaw.11G088600 Carya illinoinensis HOM05D009864 ORTHO05D010207 5.6e-15 84.7 117 44.4
CiPaw.11G089100 Carya illinoinensis HOM05D009864 ORTHO05D010207 2.1e-14 82.8 119 42.9
Haze_08352 Corylus avellana HOM05D009864 ORTHO05D010207 3.6e-14 82.0 118 49.2
Dinv28886 Davidia involucrata HOM05D009932 ORTHO05D010207 1.1e-13 80.5 82 48.8
Cfa012384 Carpinus fangiana HOM05D011256 ORTHO05D010207 1.4e-13 80.1 113 50.4
CiPaw.13G042400 Carya illinoinensis HOM05D009864 ORTHO05D010207 1.8e-13 79.7 106 45.3
Cfa012345 Carpinus fangiana HOM05D009864 ORTHO05D010207 2.3e-13 79.3 131 46.6
RhsimUnG0140400 Rhododendron simsii HOM05D009932 ORTHO05D010207 3.1e-13 79.0 109 46.8
Cfa012342 Carpinus fangiana HOM05D009864 ORTHO05D010207 5.2e-13 78.2 135 42.2
Cfa012344 Carpinus fangiana HOM05D009864 ORTHO05D010207 5.2e-13 78.2 121 47.1
CiPaw.11G071300 Carya illinoinensis HOM05D009864 ORTHO05D010207 1.2e-12 77.0 111 41.4
Rhsim05G0046200 Rhododendron simsii HOM05D009932 ORTHO05D010207 1.2e-12 77.0 104 45.2
CiPaw.13G042300 Carya illinoinensis HOM05D009864 ORTHO05D010207 2.0e-12 76.3 130 42.3
RhsimUnG0170600 Rhododendron simsii HOM05D009932 ORTHO05D010207 2.0e-12 76.3 104 44.2
Cfa012343 Carpinus fangiana HOM05D009864 ORTHO05D010207 5.8e-12 74.7 131 45.0
Thecc.02G332400 Theobroma cacao HOM05D011256 ORTHO05D010207 7.5e-12 74.3 126 38.1
Rhsim05G0045300 Rhododendron simsii HOM05D009932 ORTHO05D010207 9.8e-12 73.9 107 42.1
RhsimUnG0132000 Rhododendron simsii HOM05D009932 ORTHO05D010207 1.3e-11 73.6 107 41.1
RhsimUnG0170500 Rhododendron simsii HOM05D009932 ORTHO05D010207 1.3e-11 73.6 107 44.9
Rhsim05G0045900 Rhododendron simsii HOM05D009932 ORTHO05D010207 1.7e-11 73.2 106 45.3
Haze_08355 Corylus avellana HOM05D009864 ORTHO05D010207 4.9e-11 71.6 130 44.6
CiPaw.13G042000 Carya illinoinensis HOM05D009864 ORTHO05D010207 6.4e-11 71.2 100 44.0
Cfa012340 Carpinus fangiana HOM05D009864 ORTHO05D010207 7.0e-10 67.8 110 47.3
Rhsim05G0040700 Rhododendron simsii HOM05D009932 ORTHO05D010207 1.6e-09 66.6 96 44.8
Thecc.02G337400 Theobroma cacao HOM05D011256 ORTHO05D010207 1.6e-09 66.6 117 40.2
Rhsim09G0105700 Rhododendron simsii HOM05D009932 ORTHO05D010207 2.0e-09 66.2 106 40.6
CiPaw.14G108100 Carya illinoinensis HOM05D009864 ORTHO05D010207 1.0e-08 63.9 126 35.7
Gorai.013G091000 Gossypium raimondii HOM05D011256 ORTHO05D010207 1.0e-08 63.9 106 41.5
Cfa021297 Carpinus fangiana HOM05D009864 ORTHO05D010207 1.7e-08 63.2 106 47.2
Gohir.D13G079600 Gossypium hirsutum HOM05D011256 ORTHO05D010207 1.7e-08 63.2 106 41.5
Gorai.013G091100 Gossypium raimondii HOM05D011256 ORTHO05D010207 1.7e-08 63.2 107 41.1
Gohir.D13G079650 Gossypium hirsutum HOM05D011256 ORTHO05D010207 2.3e-08 62.8 107 41.1
Gorai.013G090400 Gossypium raimondii HOM05D011256 ORTHO05D010207 3.9e-08 62.0 103 42.7
Gohir.A13G079966 Gossypium hirsutum HOM05D011256 ORTHO05D010207 5.0e-08 61.6 106 40.6
Rhsim08G0046800 Rhododendron simsii HOM05D009932 ORTHO05D010207 6.6e-08 61.2 126 35.7
Dinv25149 Davidia involucrata HOM05D010247 ORTHO05D012515 1.1e-07 60.5 117 35.0
Gohir.A05G180701 Gossypium hirsutum HOM05D011256 ORTHO05D010207 1.1e-07 60.5 93 40.9
Gorai.009G189000 Gossypium raimondii HOM05D011256 ORTHO05D010207 1.5e-07 60.1 93 40.9
Thecc.02G337900 Theobroma cacao HOM05D011256 ORTHO05D010207 1.9e-07 59.7 79 45.6
COL.COLO4_27947 Corchorus olitorius HOM05D011256 ORTHO05D010207 4.3e-07 58.5 96 40.6
RhsimUnG0150700 Rhododendron simsii HOM05D009932 ORTHO05D010207 4.3e-07 58.5 93 41.9
CiPaw.13G041800 Carya illinoinensis HOM05D009864 ORTHO05D010207 1.2e-06 57.0 95 42.1


User provided reference genes

Program Settings