Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa003093 Carpinus fangiana HOM05D006771 ORTHO05D008296 4.9e-307 1057.0 541 100.0
QL02p062800 Quercus lobata HOM05D006771 ORTHO05D008296 1.1e-165 587.4 551 61.2
CiPaw.03G216900 Carya illinoinensis HOM05D006771 ORTHO05D008296 1.6e-148 530.4 522 58.6
Dinv36762 Davidia involucrata HOM05D006771 ORTHO05D008296 6.6e-102 375.6 563 45.1
Prupe.7G210300 Prunus persica HOM05D006771 ORTHO05D008296 1.1e-93 348.2 562 41.5
TAR624G0646 Trochodendron aralioides HOM05D006771 ORTHO05D008296 1.9e-88 330.9 637 38.3
GSVIVG01015209001 Vitis vinifera HOM05D006771 ORTHO05D008296 7.1e-88 328.9 558 40.7
Potri.006G151100 Populus trichocarpa HOM05D006771 ORTHO05D008296 1.9e-85 320.9 568 39.3
Thecc.09G090100 Theobroma cacao HOM05D006771 ORTHO05D008296 2.9e-81 307.0 558 38.7
Sabra06G0119600 Salix brachista HOM05D006771 ORTHO05D008296 9.0e-75 285.4 628 36.1
Manes.03G033100 Manihot esculenta HOM05D006771 ORTHO05D008296 4.9e-73 279.6 521 38.2
TWI63G0991 Tripterygium wilfordii HOM05D006771 ORTHO05D008296 4.2e-72 276.6 579 35.8
Duzib187G1830 Durio zibethinus HOM05D006771 ORTHO05D008296 5.5e-72 276.2 580 35.7
FvH4_1g07370 Fragaria vesca HOM05D006771 ORTHO05D008296 1.9e-69 267.7 542 36.3
RcHm_v2.0_Chr2g0093251 Rosa chinensis HOM05D006771 ORTHO05D008296 4.3e-69 266.5 526 36.5
Ciclev10010605m.g Citrus clementina HOM05D006771 ORTHO05D008296 2.8e-68 263.8 524 35.9
FAN26G2123 Fragaria x ananassa HOM05D006771 ORTHO05D008296 8.2e-68 262.3 546 36.3
FAN26G3254 Fragaria x ananassa HOM05D006771 ORTHO05D008296 3.1e-67 260.4 547 35.8
Gohir.D06G070900 Gossypium hirsutum HOM05D006771 ORTHO05D008296 3.1e-67 260.4 545 37.2
Gorai.010G082600 Gossypium raimondii HOM05D006771 ORTHO05D008296 1.0e-65 255.4 548 36.7
MD15G1206500 Malus domestica HOM05D006771 ORTHO05D008296 6.5e-65 252.7 579 34.9
Gohir.A06G072300 Gossypium hirsutum HOM05D006771 ORTHO05D008296 1.1e-64 251.9 552 35.9
FAN28G0978 Fragaria x ananassa HOM05D006771 ORTHO05D008296 1.4e-64 251.5 568 34.3
Eucgr.C03649 Eucalyptus grandis HOM05D006771 ORTHO05D008296 3.2e-64 250.4 532 34.8
FAN23G2606 Fragaria x ananassa HOM05D006771 ORTHO05D008296 5.5e-64 249.6 545 35.2
Eucgr.C03893 Eucalyptus grandis HOM05D006771 ORTHO05D008296 9.3e-64 248.8 532 34.8
Nn8g38880 Nelumbo nucifera HOM05D006771 ORTHO05D008296 1.0e-62 245.4 555 33.0
COL.COLO4_18206 Corchorus olitorius HOM05D006771 ORTHO05D008296 3.9e-62 243.4 531 34.3
FAN19G1581 Fragaria x ananassa HOM05D006771 ORTHO05D008296 1.9e-61 241.1 545 34.7
CANSAT56G0603 Cannabis sativa HOM05D006771 ORTHO05D008296 5.7e-61 239.6 523 36.1
Atru.chr7.1582 Acer truncatum HOM05D006771 ORTHO05D008296 3.1e-59 233.8 461 37.1
TPR.G35458 Trifolium pratense HOM05D006771 ORTHO05D008296 1.1e-56 225.3 498 35.5
vmacro23430 Vaccinium macrocarpon HOM05D006771 ORTHO05D008296 2.5e-56 224.2 621 31.7
Medtr2g038710 Medicago truncatula HOM05D006771 ORTHO05D008296 2.1e-55 221.1 529 34.4
arahy.Tifrunner.gnm1.ann1.H0G9IY Arachis hypogaea HOM05D006771 ORTHO05D008296 6.7e-54 216.1 520 34.6
Oeu042645.4 Olea europaea HOM05D006771 ORTHO05D008296 2.6e-53 214.2 534 32.4
vmacro06287 Vaccinium macrocarpon HOM05D006771 ORTHO05D008296 7.4e-53 212.6 642 30.2
Actinidia29883 Actinidia chinensis HOM05D006771 ORTHO05D008296 9.7e-53 212.2 482 35.7
Duzib168G0935 Durio zibethinus HOM05D006771 ORTHO05D008296 8.2e-52 209.1 373 40.5
Glyma.09G062700 Glycine max HOM05D006771 ORTHO05D008296 1.1e-51 208.8 327 43.7
arahy.Tifrunner.gnm1.ann1.LUTY24 Arachis hypogaea HOM05D006771 ORTHO05D008296 1.5e-50 204.9 543 32.8
CsaV3_2G001480 Cucumis sativus L. HOM05D006771 ORTHO05D008296 2.6e-50 204.1 532 33.6
Phvul.009G232800 Phaseolus vulgaris HOM05D006771 ORTHO05D008296 3.4e-50 203.8 327 41.9
Psat1g141720 Pisum sativum HOM05D006771 ORTHO05D008296 3.4e-50 203.8 445 37.3
SalBow1G1031 Salvia bowleyana HOM05D006771 ORTHO05D008296 1.4e-48 198.4 561 30.7
Glyma.15G169200 Glycine max HOM05D006771 ORTHO05D008296 2.5e-48 197.6 324 41.4
Sed0013958 Sechium edule HOM05D006771 ORTHO05D008296 2.5e-48 197.6 594 30.5
ClCG11G001770 Citrullus lanatus HOM05D006771 ORTHO05D008296 7.2e-48 196.1 575 30.6
DCAR_031968 Daucus carota HOM05D006771 ORTHO05D008296 6.1e-47 193.0 574 31.5
Solyc07g039190.4 Solanum lycopersicum HOM05D006771 ORTHO05D008296 7.4e-45 186.0 530 33.0
DCAR_024688 Daucus carota HOM05D006771 ORTHO05D008296 3.7e-44 183.7 544 30.7
Gohir.A07G010700 Gossypium hirsutum HOM05D006771 ORTHO05D008296 4.1e-43 180.3 312 41.0
Lj6g0004334 Lotus japonicus HOM05D006771 ORTHO05D008296 4.1e-43 180.3 386 36.0
PGSC0003DMG401013152 Solanum tuberosum HOM05D006771 ORTHO05D008296 7.0e-43 179.5 572 32.2
Gorai.001G011400 Gossypium raimondii HOM05D006771 ORTHO05D008296 1.3e-41 175.3 315 40.0
PGR102G2735 Punica granatum HOM05D006771 ORTHO05D008296 1.3e-41 175.3 506 31.2
Gohir.D07G011000 Gossypium hirsutum HOM05D006771 ORTHO05D008296 2.9e-41 174.1 315 39.7
CAN.G235.1 Capsicum annuum HOM05D006771 ORTHO05D008296 8.5e-41 172.6 553 32.2
MBI04_g34126_MAGBIO Magnolia biondii HOM05D006771 ORTHO05D008296 8.5e-41 172.6 529 30.6
Rhsim03G0232900 Rhododendron simsii HOM05D006771 ORTHO05D008296 2.5e-40 171.0 559 29.5
Haze_25906 Corylus avellana HOM05D006771 ORTHO05D008296 3.3e-37 160.6 83 95.2
PSO832G0455 Papaver somniferum HOM05D006771 ORTHO05D008296 4.4e-37 160.2 161 55.9
VMungo1309G1333 Vigna mungo HOM05D006771 ORTHO05D008296 7.5e-37 159.5 440 32.5
Migut.L01489 Erythranthe guttata HOM05D006771 ORTHO05D008296 1.3e-36 158.7 684 26.0
Nitab4.5_0005033g0010 Nicotiana tabacum HOM05D006771 ORTHO05D008296 4.8e-36 156.8 154 55.8
Lalb_Chr08g0232051 Lupinus albus HOM05D006771 ORTHO05D008296 8.2e-36 156.0 192 49.5
Cc06_g11360 Coffea canephora HOM05D006771 ORTHO05D008296 2.4e-35 154.5 319 37.6
Nitab4.5_0005634g0020 Nicotiana tabacum HOM05D006771 ORTHO05D008296 3.1e-35 154.1 154 53.9
Aqoxy7G01223_Aqoxy7G01224 Aquilegia oxysepala HOM05D006771 ORTHO05D008296 5.3e-35 153.3 380 33.4
CSS0032707 Camellia sinensis var. sinensis HOM05D006771 ORTHO05D008296 3.5e-34 150.6 451 29.7
Ca_02153_v3 Cicer arietinum L. HOM05D006771 ORTHO05D008296 3.5e-34 150.6 308 37.0
CSS0016785 Camellia sinensis var. sinensis HOM05D006771 ORTHO05D008296 4.5e-34 150.2 455 29.0
PSO063G0725 Papaver somniferum HOM05D006771 ORTHO05D008296 1.0e-33 149.1 158 51.9
HanXRQChr12g0354831 Helianthus annuus HOM05D006771 ORTHO05D008296 2.2e-33 147.9 316 33.5
Cpa.g.sc93.24 Carica papaya HOM05D006771 ORTHO05D008296 5.5e-32 143.3 526 27.4
Ah.14g085210 Amaranthus hybridus HOM05D006771 ORTHO05D008296 2.1e-31 141.4 146 54.1
ECA234G3532 Erigeron canadensis HOM05D006771 ORTHO05D008296 2.3e-30 137.9 207 42.0
Peaxi162Scf01121g00112 Petunia axillaris HOM05D006771 ORTHO05D008296 2.3e-30 137.9 580 28.1
Lsat_1_v5_gn_5_142241 Lactuca sativa HOM05D006771 ORTHO05D008296 8.8e-30 136.0 141 47.5
AUR62027498 Chenopodium quinoa HOM05D006771 ORTHO05D008296 1.5e-29 135.2 300 35.3
Sc18g0002030 Simmondsia chinensis HOM05D006771 ORTHO05D008296 7.5e-29 132.9 142 51.4
MELO3C004623.2 Cucumis melo HOM05D006771 ORTHO05D008296 9.8e-29 132.5 495 27.1
CDE06G0351 Ceratophyllum demersum HOM05D006771 ORTHO05D008296 3.7e-28 130.6 341 32.0
HanXRQChr10g0319291 Helianthus annuus HOM05D006771 ORTHO05D008296 2.4e-27 127.9 366 29.8
AT5G56850 Arabidopsis thaliana HOM05D006771 ORTHO05D008296 8.6e-25 119.4 384 30.5
Sp6g18570 Schrenkiella parvula HOM05D006771 ORTHO05D008296 8.6e-25 119.4 290 31.7
Carub.0008s1731 Capsella rubella HOM05D006771 ORTHO05D008296 1.1e-24 119.0 389 28.5
Thhalv10013398m.g Eutrema salsugineum HOM05D006771 ORTHO05D008296 1.9e-24 118.2 418 27.5
AL8G32700 Arabidopsis lyrata HOM05D006771 ORTHO05D008296 3.3e-24 117.5 190 36.8
C03p15350 Brassica napus HOM05D006771 ORTHO05D008296 7.2e-24 116.3 286 31.8
A03p13130 Brassica napus HOM05D006771 ORTHO05D008296 9.5e-24 115.9 340 31.5
BolC3t13977H Brassica oleracea HOM05D006771 ORTHO05D008296 1.2e-23 115.5 286 31.5
Hund06680 Selenicereus undatus HOM05D006771 ORTHO05D008296 1.0e-22 112.5 248 35.1
BcaB01g04422 Brassica carinata HOM05D006771 ORTHO05D008296 1.4e-22 112.1 461 26.2
unitig_699.g19301 Utricularia gibba HOM05D006771 ORTHO05D008296 5.2e-22 110.2 273 31.1
BraA03t10624Z Brassica rapa HOM05D006771 ORTHO05D008296 3.4e-21 107.5 330 28.5
SGA_v2.0_scaffold21G09363 Striga asiatica HOM05D006771 ORTHO05D008296 7.0e-19 99.8 147 41.5
MD02G1078500 Malus domestica HOM05D006771 ORTHO05D008296 9.2e-19 99.4 286 31.1
SEGI_22775 Sequoiadendron giganteum HOM05D006771 ORTHO05D008296 2.3e-17 94.7 491 25.9
Os05g0232200 Oryza sativa ssp. japonica HOM05D006771 ORTHO05D008296 2.8e-15 87.8 123 38.2
Pp3c15_7000 Physcomitrium patens HOM05D006771 ORTHO05D008296 4.7e-15 87.0 130 34.6
AagrBONN_evm.TU.Sc2ySwM_344.5001 Anthoceros agrestis HOM05D062329 ORTHO05D008296 1.8e-14 85.1 120 38.3
ATR0716G111 Amborella trichopoda HOM05D006771 ORTHO05D008296 5.2e-14 83.6 148 35.8
EL10Ac8g19225 Beta vulgaris HOM05D006771 ORTHO05D008296 1.7e-12 78.6 236 30.9
Zm00001eb345250 Zea mays HOM05D006771 ORTHO05D008296 1.7e-12 78.6 290 27.2
Pp3c9_2800 Physcomitrium patens HOM05D006771 ORTHO05D008296 8.3e-12 76.3 176 30.7
Pp3c9_2809 Physcomitrium patens HOM05D006771 ORTHO05D008296 8.3e-12 76.3 176 30.7
Mapoly0003s0143 Marchantia polymorpha HOM05D006771 ORTHO05D008296 5.4e-11 73.6 128 33.6
Sopen07g017540 Solanum pennellii HOM05D006771 ORTHO05D008296 2.3e-09 68.2 271 28.0
CBR_g20330 Chara braunii HOM05D006771 ORTHO05D008296 4.3e-08 63.9 90 37.8
AUR62033982 Chenopodium quinoa HOM05D006771 ORTHO05D008296 2.1e-07 61.6 280 26.8
Lalb_Chr08g0232041 Lupinus albus HOM05D006771 ORTHO05D008296 2.3e-06 58.2 232 25.9
Actinidia29884 Actinidia chinensis HOM05D006771 ORTHO05D008296 4.0e-06 57.4 89 36.0


User provided reference genes

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