Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa002991 Carpinus fangiana HOM05D002335 ORTHO05D006692 3.3e-109 398.3 189 100.0
Haze_26010 Corylus avellana HOM05D002335 ORTHO05D006692 1.4e-107 392.9 186 100.0
QL11p000707 Quercus lobata HOM05D002335 ORTHO05D006692 1.8e-99 365.9 188 88.3
CiPaw.04G143300 Carya illinoinensis HOM05D002335 ORTHO05D006692 5.0e-97 357.8 189 86.8
Potri.018G065800 Populus trichocarpa HOM05D002335 ORTHO05D006692 4.2e-96 354.8 183 86.9
GSVIVG01015085001 Vitis vinifera HOM05D002335 ORTHO05D006692 7.2e-96 354.0 186 84.9
Potri.006G142000 Populus trichocarpa HOM05D002335 ORTHO05D006692 1.0e-94 350.1 183 85.2
TAR626G0579 Trochodendron aralioides HOM05D002335 ORTHO05D006692 2.3e-94 349.0 184 84.2
TWI34G0950 Tripterygium wilfordii HOM05D002335 ORTHO05D006692 3.3e-93 345.1 184 83.2
Glyma.17G049400 Glycine max HOM05D002335 ORTHO05D006692 4.4e-93 344.7 181 85.6
Phvul.003G130900 Phaseolus vulgaris HOM05D002335 ORTHO05D006692 4.4e-93 344.7 185 83.8
Ciclev10009634m.g Citrus clementina HOM05D002335 ORTHO05D006692 5.7e-93 344.4 184 81.5
Glyma.13G110300 Glycine max HOM05D002335 ORTHO05D006692 7.5e-93 344.0 180 85.6
MELO3C015519.2 Cucumis melo HOM05D002335 ORTHO05D006692 1.3e-92 343.2 185 82.7
ClCG03G015100 Citrullus lanatus HOM05D002335 ORTHO05D006692 2.2e-92 342.4 185 82.7
CsaV3_1G041010 Cucumis sativus L. HOM05D002335 ORTHO05D006692 3.7e-92 341.7 185 82.2
RcHm_v2.0_Chr2g0094901 Rosa chinensis HOM05D002335 ORTHO05D006692 8.2e-92 340.5 186 83.3
Prupe.7G199200 Prunus persica HOM05D002335 ORTHO05D006692 1.1e-91 340.1 185 82.2
Lj4g0006964 Lotus japonicus HOM05D002335 ORTHO05D006692 1.4e-91 339.7 185 82.2
Nn6g35620 Nelumbo nucifera HOM05D002335 ORTHO05D006692 1.8e-91 339.3 187 80.2
Manes.03G040300 Manihot esculenta HOM05D002335 ORTHO05D006692 2.4e-91 339.0 184 79.9
CSS0035766 Camellia sinensis var. sinensis HOM05D002335 ORTHO05D006692 1.6e-90 336.3 184 81.0
CSS0046237 Camellia sinensis var. sinensis HOM05D002335 ORTHO05D006692 1.6e-90 336.3 184 81.0
VMungo1215G3327 Vigna mungo HOM05D002335 ORTHO05D006692 2.0e-90 335.9 188 81.4
Dinv25560 Davidia involucrata HOM05D002335 ORTHO05D006692 2.9e-89 332.0 184 81.5
Sed0014235 Sechium edule HOM05D002335 ORTHO05D006692 2.9e-89 332.0 185 79.5
MD02G1091100 Malus domestica HOM05D002335 ORTHO05D006692 5.0e-89 331.3 185 80.5
MD15G1217300 Malus domestica HOM05D002335 ORTHO05D006692 8.5e-89 330.5 185 80.5
Hma1.2p1_0169F.1_g074550 Hydrangea macrophylla HOM05D002335 ORTHO05D006692 1.1e-88 330.1 185 82.2
Hma1.2p1_0169F.1_g074601 Hydrangea macrophylla HOM05D002335 ORTHO05D006692 1.1e-88 330.1 185 82.2
FvH4_1g08630 Fragaria vesca HOM05D002335 ORTHO05D006692 1.5e-88 329.7 187 79.1
Sed0016579 Sechium edule HOM05D002335 ORTHO05D006692 1.9e-88 329.3 184 79.3
Lsat_1_v5_gn_7_35121 Lactuca sativa HOM05D002335 ORTHO05D006692 2.5e-88 328.9 188 77.7
FAN28G2258 Fragaria x ananassa HOM05D002335 ORTHO05D006692 3.2e-88 328.6 187 79.1
COL.COLO4_18100 Corchorus olitorius HOM05D002335 ORTHO05D006692 4.2e-88 328.2 201 74.1
FAN23G0492 Fragaria x ananassa HOM05D002335 ORTHO05D006692 5.5e-88 327.8 187 79.1
Lalb_Chr12g0200131 Lupinus albus HOM05D002335 ORTHO05D006692 7.2e-88 327.4 185 80.0
Eucgr.C03267 Eucalyptus grandis HOM05D002335 ORTHO05D006692 9.4e-88 327.0 186 78.0
Oeu049119.1 Olea europaea HOM05D002335 ORTHO05D006692 2.1e-87 325.9 185 78.9
PSO135G0567 Papaver somniferum HOM05D002335 ORTHO05D006692 3.6e-87 325.1 186 80.6
Actinidia29931 Actinidia chinensis HOM05D002335 ORTHO05D006692 4.7e-87 324.7 183 78.1
Eucgr.C03340 Eucalyptus grandis HOM05D002335 ORTHO05D006692 6.1e-87 324.3 186 77.4
Psat4g017640 Pisum sativum HOM05D002335 ORTHO05D006692 8.0e-87 323.9 185 77.8
PGR044G0908 Punica granatum HOM05D002335 ORTHO05D006692 1.0e-86 323.6 189 76.2
Eucgr.C03348 Eucalyptus grandis HOM05D002335 ORTHO05D006692 3.0e-86 322.0 186 76.3
Eucgr.C03501 Eucalyptus grandis HOM05D002335 ORTHO05D006692 3.0e-86 322.0 185 77.3
Eucgr.C03511 Eucalyptus grandis HOM05D002335 ORTHO05D006692 4.0e-86 321.6 183 77.6
Sopen12g004030 Solanum pennellii HOM05D002335 ORTHO05D006692 5.2e-86 321.2 177 80.8
CANSAT56G4475 Cannabis sativa HOM05D002335 ORTHO05D006692 8.8e-86 320.5 176 79.5
SalBow5G0979 Salvia bowleyana HOM05D002335 ORTHO05D006692 8.8e-86 320.5 185 77.8
SalBow5G2105 Salvia bowleyana HOM05D002335 ORTHO05D006692 8.8e-86 320.5 185 77.8
MSTRG.10511 Avicennia marina HOM05D002335 ORTHO05D006692 1.2e-85 320.1 185 77.8
Migut.L01564 Erythranthe guttata HOM05D002335 ORTHO05D006692 1.2e-85 320.1 185 76.8
Cpa.g.sc28.42 Carica papaya HOM05D002335 ORTHO05D006692 1.5e-85 319.7 200 73.0
A07p06320 Brassica napus HOM05D002335 ORTHO05D006282 2.6e-85 318.9 181 76.8
PGR044G2482 Punica granatum HOM05D002335 ORTHO05D006692 3.4e-85 318.5 189 76.2
BcaB06g26882 Brassica carinata HOM05D002335 ORTHO05D006692 4.4e-85 318.2 181 76.8
Thhalv10008863m.g Eutrema salsugineum HOM05D002335 ORTHO05D006692 4.4e-85 318.2 181 76.8
Solyc07g041780.3 Solanum lycopersicum HOM05D002335 ORTHO05D006692 4.4e-85 318.2 179 79.9
BraA07t28424Z Brassica rapa HOM05D002335 ORTHO05D006282 5.7e-85 317.8 176 78.4
Carub.0003s2714 Capsella rubella HOM05D002335 ORTHO05D006692 5.7e-85 317.8 181 76.8
BcaC06g35951 Brassica carinata HOM05D002335 ORTHO05D006692 7.5e-85 317.4 181 76.2
Gohir.A06G076400 Gossypium hirsutum HOM05D002335 ORTHO05D006692 7.5e-85 317.4 182 75.8
AT2G06010 Arabidopsis thaliana HOM05D002335 ORTHO05D006692 9.8e-85 317.0 181 76.2
AUR62025248 Chenopodium quinoa HOM05D002335 ORTHO05D006692 1.3e-84 316.6 184 76.1
AUR62028936 Chenopodium quinoa HOM05D002335 ORTHO05D006692 1.3e-84 316.6 184 76.1
PGSC0003DMG400013000 Solanum tuberosum HOM05D002335 ORTHO05D006692 1.3e-84 316.6 181 79.0
C07p09370 Brassica napus HOM05D002335 ORTHO05D006282 1.7e-84 316.2 176 77.8
BolC7t41360H Brassica oleracea HOM05D002335 ORTHO05D006282 1.7e-84 316.2 176 77.8
Sc18g0002530 Simmondsia chinensis HOM05D002335 ORTHO05D006692 1.7e-84 316.2 174 79.9
FAN19G2961 Fragaria x ananassa HOM05D002335 ORTHO05D006692 2.2e-84 315.8 208 70.7
Gorai.010G088300 Gossypium raimondii HOM05D002335 ORTHO05D006692 2.2e-84 315.8 182 75.8
EL10Ac8g19062 Beta vulgaris HOM05D002335 ORTHO05D006692 2.8e-84 315.5 185 75.1
CARHR103670 Cardamine hirsuta HOM05D002335 ORTHO05D006692 3.7e-84 315.1 176 76.7
Sp3g24590 Schrenkiella parvula HOM05D002335 ORTHO05D006692 3.7e-84 315.1 181 75.1
AL3G43590 Arabidopsis lyrata HOM05D002335 ORTHO05D006692 4.8e-84 314.7 181 75.7
ECA240G4665 Erigeron canadensis HOM05D002335 ORTHO05D006692 6.3e-84 314.3 180 76.7
Sopen07g021270 Solanum pennellii HOM05D002335 ORTHO05D006692 1.4e-83 313.2 179 79.3
Hund26036 Selenicereus undatus HOM05D002335 ORTHO05D006692 1.8e-83 312.8 182 74.2
vmacro17199 Vaccinium macrocarpon HOM05D002335 ORTHO05D006692 1.8e-83 312.8 215 67.0
Peaxi162Scf00127g00206 Petunia axillaris HOM05D002335 ORTHO05D006692 2.4e-83 312.4 181 75.7
THA.LOC104826590 Tarenaya hassleriana HOM05D002335 ORTHO05D006692 3.1e-83 312.0 176 77.8
Eucgr.H02780 Eucalyptus grandis HOM05D002335 ORTHO05D006692 4.1e-83 311.6 185 73.5
PGSC0003DMG400000324 Solanum tuberosum HOM05D002335 ORTHO05D006692 7.0e-83 310.8 197 73.1
DCAR_024750 Daucus carota HOM05D002335 ORTHO05D006692 9.1e-83 310.5 184 76.1
DCAR_031919 Daucus carota HOM05D002335 ORTHO05D006692 9.1e-83 310.5 184 76.1
Aa31sc133G40 Aethionema arabicum HOM05D002335 ORTHO05D006692 1.2e-82 310.1 181 74.0
SGA_v2.0_scaffold308G48074 Striga asiatica HOM05D002335 ORTHO05D006692 2.0e-82 309.3 182 75.8
THA.LOC104815332 Tarenaya hassleriana HOM05D002335 ORTHO05D006692 5.9e-82 307.8 177 78.0
FAN26G1566 Fragaria x ananassa HOM05D002335 ORTHO05D006692 2.9e-81 305.4 229 64.2
FAN26G0120 Fragaria x ananassa HOM05D002335 ORTHO05D006692 3.8e-81 305.1 229 63.8
Aqoxy7G04078 Aquilegia oxysepala HOM05D002335 ORTHO05D006692 8.6e-81 303.9 178 72.5
Rhsim05G0007700 Rhododendron simsii HOM05D002335 ORTHO05D006692 1.9e-80 302.8 168 78.6
Eucgr.C03331 Eucalyptus grandis HOM05D002335 ORTHO05D006692 5.2e-78 294.7 165 80.0
MBI13_g42820_MAGBIO Magnolia biondii HOM05D002335 ORTHO05D006692 2.6e-77 292.4 180 71.7
Cc06_g12140 Coffea canephora HOM05D002335 ORTHO05D006692 3.4e-77 292.0 154 84.4
Sabra06G0111100 Salix brachista HOM05D002335 ORTHO05D006692 5.7e-77 291.2 154 82.5
Zm00001eb081660 Zea mays HOM05D002335 ORTHO05D006692 1.3e-76 290.0 182 69.2
CDE05G1851 Ceratophyllum demersum HOM05D002335 ORTHO05D006692 1.1e-75 287.0 184 68.5
Thecc.09G077400 Theobroma cacao HOM05D002335 ORTHO05D006692 1.1e-75 287.0 158 78.5
ATR0598G258 Amborella trichopoda HOM05D002335 ORTHO05D006692 1.2e-74 283.5 184 67.9
MBI19_g11823_MAGBIO Magnolia biondii HOM05D002335 ORTHO05D006692 1.6e-74 283.1 173 72.8
MBI19_g37791_MAGBIO Magnolia biondii HOM05D002335 ORTHO05D006692 1.6e-74 283.1 173 72.8
HanXRQChr03g0060151 Helianthus annuus HOM05D002335 ORTHO05D006692 3.5e-74 282.0 166 77.7
arahy.Tifrunner.gnm1.ann1.0T42SY Arachis hypogaea HOM05D002335 ORTHO05D006692 4.5e-74 281.6 186 69.9
arahy.Tifrunner.gnm1.ann1.U5UTMI Arachis hypogaea HOM05D002335 ORTHO05D006692 5.0e-73 278.1 186 70.4
vmacro06340 Vaccinium macrocarpon HOM05D002335 ORTHO05D006692 5.0e-73 278.1 191 67.0
Dinv42391 Davidia involucrata HOM05D002335 ORTHO05D006692 1.9e-72 276.2 171 75.4
Atru.chr7.1701 Acer truncatum HOM05D002335 ORTHO05D006692 4.7e-71 271.6 151 78.1
Ca_21321_v3 Cicer arietinum L. HOM05D002335 ORTHO05D006692 6.1e-71 271.2 155 76.8
Solyc12g009080.2 Solanum lycopersicum HOM05D002335 ORTHO05D006692 1.5e-69 266.5 149 77.9
CAN.G1963.2 Capsicum annuum HOM05D002335 ORTHO05D006692 3.4e-69 265.4 149 76.5
CDE11G0744 Ceratophyllum demersum HOM05D002335 ORTHO05D006692 1.7e-68 263.1 207 58.9
TPR.G12576 Trifolium pratense HOM05D002335 ORTHO05D006692 2.9e-68 262.3 148 77.0
Rhsim03G0227700 Rhododendron simsii HOM05D002335 ORTHO05D006692 9.2e-67 257.3 281 49.1
Nitab4.5_0000073g0180 Nicotiana tabacum HOM05D002335 ORTHO05D006692 3.5e-66 255.4 146 78.1
Medtr4g125360 Medicago truncatula HOM05D002335 ORTHO05D006692 1.0e-65 253.8 140 78.6
unitig_8.g3530 Utricularia gibba HOM05D002335 ORTHO05D006692 7.3e-64 247.7 184 61.4
Peaxi162Scf00928g00035 Petunia axillaris HOM05D002335 ORTHO05D006692 1.2e-63 246.9 174 67.8
HPP92_013380 Vanilla planifolia HOM05D002335 ORTHO05D006692 9.2e-59 230.7 142 70.4
Mapoly0146s0032 Marchantia polymorpha HOM05D002335 ORTHO05D006692 3.9e-57 225.3 184 53.8
Eucgr.C03278 Eucalyptus grandis HOM05D002335 ORTHO05D006692 1.6e-55 219.9 121 80.2
unitig_899.g15177 Utricularia gibba HOM05D002335 ORTHO05D006692 2.1e-55 219.5 177 55.9
Lj7A687T54 Lonicera japonica HOM05D002335 ORTHO05D006692 2.3e-54 216.1 194 56.7
Gohir.D06G075400 Gossypium hirsutum HOM05D002335 ORTHO05D006692 4.1e-51 205.3 182 54.4
Ah.09g231610 Amaranthus hybridus HOM05D002335 ORTHO05D006692 5.6e-48 194.9 205 49.3
Nitab4.5_0011754g0020 Nicotiana tabacum HOM05D002335 ORTHO05D006692 4.7e-47 191.8 184 57.1
AagrBONN_evm.TU.Sc2ySwM_368.225 Anthoceros agrestis HOM05D002335 ORTHO05D006692 1.1e-46 190.7 202 46.0
SMO361G0221 Selaginella moellendorffii HOM05D002335 ORTHO05D006692 6.8e-46 188.0 173 45.1
SMO361G0519 Selaginella moellendorffii HOM05D002335 ORTHO05D006692 6.8e-46 188.0 173 45.1
SEGI_04946 Sequoiadendron giganteum HOM05D002335 ORTHO05D006692 8.9e-46 187.6 121 68.6
Eucgr.L03294 Eucalyptus grandis HOM05D002335 ORTHO05D006692 7.8e-42 174.5 144 59.0
Nitab4.5_0002966g0010 Nicotiana tabacum HOM05D002335 ORTHO05D006692 1.0e-41 174.1 91 81.3
HPP92_013408 Vanilla planifolia HOM05D006937 ORTHO05D008747 6.6e-41 171.4 162 51.9
Eucgr.C03281 Eucalyptus grandis HOM05D002335 ORTHO05D006692 3.3e-40 169.1 91 81.3
Pp3c2_1630 Physcomitrium patens HOM05D002335 ORTHO05D006692 9.6e-40 167.5 178 40.4
Pp3c14_25980 Physcomitrium patens HOM05D002335 ORTHO05D006692 3.6e-39 165.6 180 38.9
AagrBONN_evm.TU.Sc2ySwM_368.521 Anthoceros agrestis HOM05D002335 ORTHO05D006692 4.7e-39 165.2 205 39.0
HPP92_013382 Vanilla planifolia HOM05D002335 ORTHO05D006692 9.9e-37 157.5 93 73.1
Eucgr.C03513 Eucalyptus grandis HOM05D002335 ORTHO05D006692 1.7e-36 156.8 150 53.3
CBR_g38469 Chara braunii HOM05D002335 ORTHO05D006692 1.1e-35 154.1 142 46.5
Os04g0446200 Oryza sativa ssp. japonica HOM05D002335 ORTHO05D006692 1.8e-30 136.7 93 64.5
vmacro17200 Vaccinium macrocarpon HOM05D001119 ORTHO05D000862 1.9e-11 73.6 46 63.0
Thecc.09G077100 Theobroma cacao HOM05D001119 ORTHO05D000862 1.2e-10 70.9 74 45.9
Nn6g32302 Nelumbo nucifera HOM05D002335 ORTHO05D006692 4.3e-08 62.4 43 67.4
Actinidia38479 Actinidia chinensis HOM05D002335 ORTHO05D006692 1.8e-06 57.0 32 84.4


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