Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa002868 Carpinus fangiana HOM05D006928 ORTHO05D008618 4.2e-44 181.0 94 100.0
CiPaw.04G083900 Carya illinoinensis HOM05D006928 ORTHO05D008618 2.8e-40 168.3 94 92.6
COL.COLO4_22417 Corchorus olitorius HOM05D006928 ORTHO05D008618 1.5e-38 162.5 89 93.3
Glyma.08G146400 Glycine max HOM05D006928 ORTHO05D008618 1.5e-38 162.5 94 85.1
Lj4g0006915 Lotus japonicus HOM05D006928 ORTHO05D008618 1.5e-38 162.5 94 85.1
RcHm_v2.0_Chr2g0119151 Rosa chinensis HOM05D006928 ORTHO05D008618 1.5e-38 162.5 94 87.2
Gohir.A02G138100 Gossypium hirsutum HOM05D006928 ORTHO05D008618 2.6e-38 161.8 94 88.3
Gohir.D03G048800 Gossypium hirsutum HOM05D006928 ORTHO05D008618 2.6e-38 161.8 94 88.3
Gorai.003G050100 Gossypium raimondii HOM05D006928 ORTHO05D008618 2.6e-38 161.8 94 88.3
Glyma.05G188300 Glycine max HOM05D006928 ORTHO05D008618 7.6e-38 160.2 94 85.1
Sabra16G0195000 Salix brachista HOM05D006928 ORTHO05D008618 9.9e-38 159.8 94 87.2
MD15G1343100 Malus domestica HOM05D006928 ORTHO05D008618 1.7e-37 159.1 94 86.2
Manes.12G150300 Manihot esculenta HOM05D006928 ORTHO05D008618 1.7e-37 159.1 94 87.2
Prupe.6G162900 Prunus persica HOM05D006928 ORTHO05D008618 1.7e-37 159.1 94 85.1
Duzib264G0933 Durio zibethinus HOM05D006928 ORTHO05D008618 2.2e-37 158.7 94 86.2
GSVIVG01026587001 Vitis vinifera HOM05D006928 ORTHO05D008618 2.9e-37 158.3 94 86.2
Psat7g048720 Pisum sativum HOM05D006928 ORTHO05D008618 3.8e-37 157.9 94 83.0
TPR.G2179 Trifolium pratense HOM05D006928 ORTHO05D008618 4.9e-37 157.5 94 83.0
Phvul.002G269100 Phaseolus vulgaris HOM05D006928 ORTHO05D008618 6.4e-37 157.1 94 83.0
FAN23G1796 Fragaria x ananassa HOM05D006928 ORTHO05D008618 1.1e-36 156.4 94 84.0
FAN28G2803 Fragaria x ananassa HOM05D006928 ORTHO05D008618 1.1e-36 156.4 94 84.0
Lalb_Chr12g0203321 Lupinus albus HOM05D006928 ORTHO05D008618 1.1e-36 156.4 89 88.8
PGR119G2472 Punica granatum HOM05D006928 ORTHO05D008618 1.4e-36 156.0 93 84.9
Thecc.01G120800 Theobroma cacao HOM05D006928 ORTHO05D008618 1.4e-36 156.0 88 89.8
Actinidia17615 Actinidia chinensis HOM05D006928 ORTHO05D008618 1.9e-36 155.6 94 85.1
FvH4_1g23590 Fragaria vesca HOM05D006928 ORTHO05D008618 2.4e-36 155.2 94 83.0
FAN19G2906 Fragaria x ananassa HOM05D006928 ORTHO05D008618 2.4e-36 155.2 94 83.0
Duzib187G1761 Durio zibethinus HOM05D006928 ORTHO05D008618 4.2e-36 154.5 89 87.6
Dinv09934 Davidia involucrata HOM05D006928 ORTHO05D008618 5.4e-36 154.1 94 83.0
Potri.001G309200 Populus trichocarpa HOM05D006928 ORTHO05D008618 5.4e-36 154.1 94 84.0
Eucgr.I00245 Eucalyptus grandis HOM05D006928 ORTHO05D008618 7.1e-36 153.7 85 90.6
Nitab4.5_0010284g0020 Nicotiana tabacum HOM05D006928 ORTHO05D008618 9.3e-36 153.3 94 85.1
Hund03424 Selenicereus undatus HOM05D006928 ORTHO05D008618 1.2e-35 152.9 89 86.5
CSS0007569 Camellia sinensis var. sinensis HOM05D006928 ORTHO05D008618 1.6e-35 152.5 88 88.6
CSS0018620 Camellia sinensis var. sinensis HOM05D006928 ORTHO05D008618 1.6e-35 152.5 88 88.6
Nitab4.5_0002064g0030 Nicotiana tabacum HOM05D006928 ORTHO05D008618 2.1e-35 152.1 94 84.0
Haze_25197 Corylus avellana HOM05D006928 ORTHO05D008618 3.5e-35 151.4 159 58.5
Peaxi162Scf00025g02217 Petunia axillaris HOM05D006928 ORTHO05D008618 4.6e-35 151.0 94 81.9
Atru.chr4.541 Acer truncatum HOM05D006928 ORTHO05D008618 6.0e-35 150.6 94 80.9
CANSAT01G1375 Cannabis sativa HOM05D006928 ORTHO05D008618 7.9e-35 150.2 94 81.9
Ciclev10026852m.g Citrus clementina HOM05D006928 ORTHO05D008618 7.9e-35 150.2 85 88.2
Cc00_g00790 Coffea canephora HOM05D006928 ORTHO05D008618 7.9e-35 150.2 89 83.1
Cc07_g17360 Coffea canephora HOM05D006928 ORTHO05D008618 7.9e-35 150.2 89 83.1
Nn1g06098 Nelumbo nucifera HOM05D006928 ORTHO05D008618 7.9e-35 150.2 93 80.6
EL10Ac6g15253 Beta vulgaris HOM05D006928 ORTHO05D008618 1.3e-34 149.4 92 82.6
Aqoxy3G02632 Aquilegia oxysepala HOM05D006928 ORTHO05D008618 1.8e-34 149.1 85 88.2
ClCG02G000690 Citrullus lanatus HOM05D006928 ORTHO05D008618 1.8e-34 149.1 93 78.5
MBI09_g18622_MAGBIO Magnolia biondii HOM05D006928 ORTHO05D008618 1.8e-34 149.1 94 80.9
MBI09_g20115_MAGBIO Magnolia biondii HOM05D006928 ORTHO05D008618 1.8e-34 149.1 94 80.9
TAR381G0700 Trochodendron aralioides HOM05D006928 ORTHO05D008618 1.8e-34 149.1 85 88.2
AUR62003624 Chenopodium quinoa HOM05D006928 ORTHO05D008618 2.3e-34 148.7 94 78.7
Sed0020530 Sechium edule HOM05D006928 ORTHO05D008618 3.0e-34 148.3 93 78.5
TWI75G0630 Tripterygium wilfordii HOM05D006928 ORTHO05D008618 6.7e-34 147.1 94 80.9
CsaV3_2G018080 Cucumis sativus L. HOM05D006928 ORTHO05D008618 8.7e-34 146.7 93 78.5
Aa31LG1G17250 Aethionema arabicum HOM05D006928 ORTHO05D008618 1.1e-33 146.4 86 84.9
AL8G42110 Arabidopsis lyrata HOM05D006928 ORTHO05D008618 2.5e-33 145.2 93 78.5
Sc16g0003960 Simmondsia chinensis HOM05D006928 ORTHO05D008618 2.5e-33 145.2 89 84.3
Thhalv10005190m.g Eutrema salsugineum HOM05D006928 ORTHO05D008618 9.6e-33 143.3 94 78.7
BcaB04g19985 Brassica carinata HOM05D006928 ORTHO05D008618 1.3e-32 142.9 92 79.3
DCAR_027258 Daucus carota HOM05D006928 ORTHO05D008618 1.3e-32 142.9 90 82.2
HanXRQChr15g0471661 Helianthus annuus HOM05D006928 ORTHO05D008618 1.3e-32 142.9 94 73.4
THA.LOC104799431 Tarenaya hassleriana HOM05D006928 ORTHO05D008618 1.3e-32 142.9 93 77.4
THA.LOC104818466 Tarenaya hassleriana HOM05D006928 ORTHO05D008618 1.3e-32 142.9 93 79.6
PSO541G1601 Papaver somniferum HOM05D006928 ORTHO05D008618 1.6e-32 142.5 85 82.4
Haze_25192 Corylus avellana HOM05D006928 ORTHO05D008618 2.1e-32 142.1 74 98.6
Sp2g27750 Schrenkiella parvula HOM05D006928 ORTHO05D008618 2.8e-32 141.7 85 82.4
MSTRG.2691 Avicennia marina HOM05D006928 ORTHO05D008618 3.7e-32 141.4 92 80.4
BraA09t36529Z Brassica rapa HOM05D006928 ORTHO05D008618 3.7e-32 141.4 93 76.3
CARHR278670 Cardamine hirsuta HOM05D006928 ORTHO05D008618 3.7e-32 141.4 93 75.3
Solyc11g005360.2 Solanum lycopersicum HOM05D006928 ORTHO05D008618 3.7e-32 141.4 84 84.5
Sopen11g001370 Solanum pennellii HOM05D006928 ORTHO05D008618 3.7e-32 141.4 84 84.5
Haze_25196 Corylus avellana HOM05D006928 ORTHO05D008618 6.2e-32 140.6 73 98.6
BolC9t53907H Brassica oleracea HOM05D006928 ORTHO05D008618 8.1e-32 140.2 93 75.3
PSO675G6866 Papaver somniferum HOM05D006928 ORTHO05D008618 8.1e-32 140.2 85 81.2
Sp6g33580 Schrenkiella parvula HOM05D006928 ORTHO05D008618 8.1e-32 140.2 85 81.2
ECA238G4197 Erigeron canadensis HOM05D006928 ORTHO05D008618 1.8e-31 139.0 90 76.7
Carub.0008s2549 Capsella rubella HOM05D006928 ORTHO05D008618 2.4e-31 138.7 93 73.1
Lsat_1_v5_gn_2_66720 Lactuca sativa HOM05D006928 ORTHO05D008618 3.1e-31 138.3 94 74.5
Thhalv10015138m.g Eutrema salsugineum HOM05D006928 ORTHO05D008618 9.0e-31 136.7 81 82.7
Migut.H01113 Erythranthe guttata HOM05D006928 ORTHO05D008618 2.6e-30 135.2 93 74.2
AL6G20240 Arabidopsis lyrata HOM05D006928 ORTHO05D008618 3.4e-30 134.8 79 84.8
QL06p051863 Quercus lobata HOM05D006928 ORTHO05D008618 5.8e-30 134.0 72 95.8
BcaC04g23298 Brassica carinata HOM05D006928 ORTHO05D008618 7.6e-30 133.7 102 69.6
Carub.0006s0825 Capsella rubella HOM05D006928 ORTHO05D008618 7.6e-30 133.7 83 80.7
AT5G09830 Arabidopsis thaliana HOM05D006928 ORTHO05D008618 9.9e-30 133.3 79 82.3
BcaB08g37169 Brassica carinata HOM05D006928 ORTHO05D008618 2.9e-29 131.7 83 78.3
A10p27630 Brassica napus HOM05D006928 ORTHO05D008618 2.9e-29 131.7 83 78.3
C09p67690 Brassica napus HOM05D006928 ORTHO05D008618 2.9e-29 131.7 83 78.3
BolC9t59531H Brassica oleracea HOM05D006928 ORTHO05D008618 2.9e-29 131.7 83 78.3
SMO351G0462 Selaginella moellendorffii HOM05D006928 ORTHO05D008618 6.4e-29 130.6 94 71.3
BraA10t44815Z Brassica rapa HOM05D006928 ORTHO05D008618 8.4e-29 130.2 83 77.1
CDE12G0365 Ceratophyllum demersum HOM05D006928 ORTHO05D008618 8.4e-29 130.2 93 69.9
AagrBONN_evm.TU.Sc2ySwM_344.3776 Anthoceros agrestis HOM05D006928 ORTHO05D008618 5.5e-28 127.5 89 71.9
Pp3c4_15580 Physcomitrium patens HOM05D006928 ORTHO05D008618 9.3e-28 126.7 88 71.6
HPP92_027450 Vanilla planifolia HOM05D006928 ORTHO05D008618 9.3e-28 126.7 81 77.8
Actinidia26282 Actinidia chinensis HOM05D006928 ORTHO05D008618 2.1e-27 125.6 84 78.6
TAR376G0498 Trochodendron aralioides HOM05D006928 ORTHO05D008618 3.5e-27 124.8 77 85.7
Medtr8g092690 Medicago truncatula HOM05D006928 ORTHO05D008618 3.0e-26 121.7 73 82.2
CDE04G1901 Ceratophyllum demersum HOM05D006928 ORTHO05D008618 1.1e-25 119.8 90 70.0
Mapoly0023s0156 Marchantia polymorpha HOM05D006928 ORTHO05D008618 1.1e-25 119.8 83 68.7
Rhsim08G0003500 Rhododendron simsii HOM05D002612 ORTHO05D008618 1.1e-25 119.8 80 78.8
Ah.03g146570 Amaranthus hybridus HOM05D006928 ORTHO05D008618 1.5e-25 119.4 73 83.6
Cpa.g.sc1003.1 Carica papaya HOM05D006928 ORTHO05D008618 2.5e-25 118.6 73 83.6
C09p09990 Brassica napus HOM05D006928 ORTHO05D008618 1.3e-24 116.3 96 64.6
Zm00001eb146740 Zea mays HOM05D006928 ORTHO05D008618 1.6e-24 115.9 87 66.7
AUR62017933 Chenopodium quinoa HOM05D006928 ORTHO05D008618 2.1e-24 115.5 66 84.8
SGA_v2.0_scaffold137G35109 Striga asiatica HOM05D006928 ORTHO05D008618 4.8e-24 114.4 76 77.6
CAN.G249.11 Capsicum annuum HOM05D006928 ORTHO05D008618 9.0e-23 110.2 73 78.1
CARHR203570 Cardamine hirsuta HOM05D006928 ORTHO05D008618 1.5e-22 109.4 64 82.8
unitig_0.g37 Utricularia gibba HOM05D006928 ORTHO05D008618 2.6e-22 108.6 69 76.8
SalBow1G8150 Salvia bowleyana HOM05D006928 ORTHO05D008618 3.4e-22 108.2 64 82.8
CBR_g19927 Chara braunii HOM05D006928 ORTHO05D008618 6.5e-21 104.0 80 66.2
BcaB08g37178 Brassica carinata HOM05D006928 ORTHO05D008618 2.3e-18 95.5 83 60.2
Os01g0866600 Oryza sativa ssp. japonica HOM05D006928 ORTHO05D008618 1.5e-17 92.8 64 73.4
Cre03.g164550 Chlamydomonas reinhardtii HOM05D006928 ORTHO05D008618 2.5e-17 92.0 89 53.9
SEGI_33222 Sequoiadendron giganteum HOM05D006928 ORTHO05D008618 6.3e-16 87.4 108 50.0
Zm00001eb333130 Zea mays HOM05D002854 ORTHO05D003051 7.7e-06 53.9 90 41.1


User provided reference genes

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