Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa002802 Carpinus fangiana HOM05D001595 ORTHO05D034160 6.1e-70 267.3 129 100.0
Haze_25102 Corylus avellana HOM05D001595 ORTHO05D034160 9.4e-47 190.3 109 85.3
Thecc.01G118600 Theobroma cacao HOM05D001595 ORTHO05D001573 8.0e-22 107.5 124 45.2
Dinv02717 Davidia involucrata HOM05D001595 ORTHO05D001573 2.6e-20 102.4 119 41.2
Duzib187G0218 Durio zibethinus HOM05D001595 ORTHO05D001573 2.6e-20 102.4 126 43.7
QL06p031123 Quercus lobata HOM05D001595 ORTHO05D001573 5.7e-20 101.3 117 46.2
QL10p018398 Quercus lobata HOM05D001595 ORTHO05D001573 7.5e-20 100.9 122 45.9
QL11p027894 Quercus lobata HOM05D001595 ORTHO05D001573 7.5e-20 100.9 121 45.5
CiPaw.04G087600 Carya illinoinensis HOM05D001595 ORTHO05D001573 1.3e-19 100.1 121 44.6
QL06p031114 Quercus lobata HOM05D001595 ORTHO05D001573 2.2e-19 99.4 120 46.7
TWI75G1603 Tripterygium wilfordii HOM05D001595 ORTHO05D001573 3.7e-19 98.6 119 42.0
GSVIVG01016787001 Vitis vinifera HOM05D001595 ORTHO05D001573 3.7e-19 98.6 118 40.7
CiPaw.04G087500 Carya illinoinensis HOM05D001595 ORTHO05D001573 1.8e-18 96.3 99 46.5
TWI79G1743 Tripterygium wilfordii HOM05D001595 ORTHO05D001573 3.2e-18 95.5 121 41.3
Atru.chr4.617 Acer truncatum HOM05D001595 ORTHO05D001573 5.4e-18 94.7 122 40.2
QL10p018382 Quercus lobata HOM05D001595 ORTHO05D001573 7.0e-18 94.4 125 44.0
Gohir.A10G082928 Gossypium hirsutum HOM05D001595 ORTHO05D001573 5.6e-15 84.7 125 40.0
Hma1.2p1_3414F.1_g335920 Hydrangea macrophylla HOM05D001595 ORTHO05D001573 9.5e-15 84.0 121 38.8
Gohir.D10G105500 Gossypium hirsutum HOM05D001595 ORTHO05D001573 1.6e-14 83.2 125 39.2
Gorai.011G115100 Gossypium raimondii HOM05D001595 ORTHO05D001573 1.6e-14 83.2 125 39.2
Hma1.2p1_1625F.1_g294300 Hydrangea macrophylla HOM05D001595 ORTHO05D001573 2.1e-14 82.8 121 38.8
CSS0038885 Camellia sinensis var. sinensis HOM05D001595 ORTHO05D001573 4.7e-14 81.6 132 34.8
Lalb_Chr08g0238711 Lupinus albus HOM05D001595 ORTHO05D001573 1.8e-13 79.7 129 34.1
MD15G1340900 Malus domestica HOM05D001595 ORTHO05D001573 1.2e-12 77.0 124 37.9
arahy.Tifrunner.gnm1.ann1.D1YDE1 Arachis hypogaea HOM05D001595 ORTHO05D001573 4.4e-12 75.1 130 33.8
Rhsim10G0143800 Rhododendron simsii HOM05D001595 ORTHO05D001573 4.4e-12 75.1 125 30.4
Thecc.10G092000 Theobroma cacao HOM05D001595 ORTHO05D001573 1.3e-11 73.6 124 40.3
Cfa002803 Carpinus fangiana HOM05D001595 ORTHO05D001573 1.7e-11 73.2 125 40.8
Nn1g00645 Nelumbo nucifera HOM05D001595 ORTHO05D001573 2.9e-11 72.4 122 35.2
QL06p031121 Quercus lobata HOM05D001595 ORTHO05D001573 2.9e-11 72.4 120 36.7
Haze_06479 Corylus avellana HOM05D001595 ORTHO05D001573 1.4e-10 70.1 113 38.9
CAN.G264.6 Capsicum annuum HOM05D001595 ORTHO05D001573 2.4e-10 69.3 110 37.3
AT4G39340 Arabidopsis thaliana HOM05D001595 ORTHO05D001573 5.4e-10 68.2 114 32.5
CANSAT01G0338 Cannabis sativa HOM05D001595 ORTHO05D001573 7.0e-10 67.8 90 37.8
Nitab4.5_0001344g0030 Nicotiana tabacum HOM05D001595 ORTHO05D001573 7.0e-10 67.8 112 33.9
Oeu054912.1 Olea europaea HOM05D001595 ORTHO05D001573 1.2e-09 67.0 128 28.9
AL7G11320 Arabidopsis lyrata HOM05D001595 ORTHO05D001573 1.6e-09 66.6 118 31.4
Haze_27442 Corylus avellana HOM05D001595 ORTHO05D001573 1.6e-09 66.6 129 37.2
CARHR247370 Cardamine hirsuta HOM05D001595 ORTHO05D001573 2.7e-09 65.9 114 32.5
AUR62040231 Chenopodium quinoa HOM05D001595 ORTHO05D001573 6.0e-09 64.7 117 30.8
Nitab4.5_0001187g0010 Nicotiana tabacum HOM05D001595 ORTHO05D001573 6.0e-09 64.7 120 32.5
Solyc04g071640.1 Solanum lycopersicum HOM05D001595 ORTHO05D001573 6.0e-09 64.7 113 37.2
Aa31LG6G15940 Aethionema arabicum HOM05D001595 ORTHO05D001573 7.8e-09 64.3 84 35.7
Carub.0004s0081 Capsella rubella HOM05D001595 ORTHO05D001573 7.8e-09 64.3 85 32.9
PGSC0003DMG400006658 Solanum tuberosum HOM05D001595 ORTHO05D001573 7.8e-09 64.3 114 36.0
Prupe.8G034300 Prunus persica HOM05D001595 ORTHO05D001573 1.0e-08 63.9 118 28.0
Sopen04g027630 Solanum pennellii HOM05D001595 ORTHO05D001573 1.0e-08 63.9 113 37.2
HanXRQChr02g0038121 Helianthus annuus HOM05D001595 ORTHO05D001573 1.3e-08 63.5 83 37.3
HanXRQChr02g0042711 Helianthus annuus HOM05D001595 ORTHO05D001573 1.3e-08 63.5 83 37.3
arahy.Tifrunner.gnm1.ann1.5BVN2C Arachis hypogaea HOM05D001595 ORTHO05D001573 1.7e-08 63.2 132 31.1
Thhalv10026562m.g Eutrema salsugineum HOM05D001595 ORTHO05D001573 1.7e-08 63.2 116 34.5
HanXRQChr02g0038131 Helianthus annuus HOM05D001595 ORTHO05D001573 1.7e-08 63.2 83 37.3
PSO463G0001 Papaver somniferum HOM05D001595 ORTHO05D001573 1.7e-08 63.2 121 29.8
Phvul.006G037100 Phaseolus vulgaris HOM05D001595 ORTHO05D001573 1.7e-08 63.2 115 30.4
Solyc11g005540.1 Solanum lycopersicum HOM05D001595 ORTHO05D001573 1.7e-08 63.2 121 29.8
AUR62017034 Chenopodium quinoa HOM05D001595 ORTHO05D001573 2.3e-08 62.8 126 31.0
ATR0584G162 Amborella trichopoda HOM05D001595 ORTHO05D001573 3.0e-08 62.4 112 33.0
Migut.L00051 Erythranthe guttata HOM05D001595 ORTHO05D001573 3.9e-08 62.0 113 32.7
EL10Ac8g20404 Beta vulgaris HOM05D001595 ORTHO05D001573 5.0e-08 61.6 120 28.3
Peaxi162Scf00079g02424 Petunia axillaris HOM05D001595 ORTHO05D001573 5.0e-08 61.6 121 35.5
BcaNung02340 Brassica carinata HOM05D001595 ORTHO05D001573 6.6e-08 61.2 112 27.7
C07p63220 Brassica napus HOM05D001595 ORTHO05D001573 6.6e-08 61.2 112 27.7
Lj4P858T30 Lonicera japonica HOM05D001595 ORTHO05D001573 6.6e-08 61.2 88 31.8
AT2G21750 Arabidopsis thaliana HOM05D001595 ORTHO05D001573 8.6e-08 60.8 109 29.4
Haze_17775 Corylus avellana HOM05D001595 ORTHO05D001573 8.6e-08 60.8 75 34.7
MBI19_g47477_MAGBIO Magnolia biondii HOM05D001595 ORTHO05D001573 8.6e-08 60.8 118 26.3
Sp7g36540 Schrenkiella parvula HOM05D001595 ORTHO05D001573 1.5e-07 60.1 109 32.1
Sed0012876 Sechium edule HOM05D001595 ORTHO05D001573 1.5e-07 60.1 120 29.2
Cfa018309 Carpinus fangiana HOM05D001595 ORTHO05D001573 1.9e-07 59.7 75 33.3
QL01p017816 Quercus lobata HOM05D001595 ORTHO05D034160 1.9e-07 59.7 56 51.8
VMungo0540G1199 Vigna mungo HOM05D001595 ORTHO05D001573 1.9e-07 59.7 116 31.0
BolC7t46732H Brassica oleracea HOM05D001595 ORTHO05D001573 2.5e-07 59.3 112 26.8
Lj6g0008981 Lotus japonicus HOM05D001595 ORTHO05D001573 2.5e-07 59.3 113 24.8
ClCG08G007020 Citrullus lanatus HOM05D001595 ORTHO05D001573 3.3e-07 58.9 111 25.2
Lj6g0002778 Lotus japonicus HOM05D001595 ORTHO05D001573 3.3e-07 58.9 125 24.0
RcHm_v2.0_Chr6g0274951 Rosa chinensis HOM05D001595 ORTHO05D001573 3.3e-07 58.9 86 30.2
Ca_14639_v3 Cicer arietinum L. HOM05D001595 ORTHO05D001573 4.3e-07 58.5 84 33.3
Aqoxy5G02057 Aquilegia oxysepala HOM05D001595 ORTHO05D001573 7.3e-07 57.8 83 32.5
Haze_17770 Corylus avellana HOM05D001595 ORTHO05D001573 7.3e-07 57.8 75 33.3
Prupe.8G034800 Prunus persica HOM05D001595 ORTHO05D001573 7.3e-07 57.8 86 30.2
Ah.09g237460 Amaranthus hybridus HOM05D001595 ORTHO05D001573 9.5e-07 57.4 122 27.0
Migut.C00167 Erythranthe guttata HOM05D001595 ORTHO05D001573 9.5e-07 57.4 68 35.3
Migut.C00168 Erythranthe guttata HOM05D001595 ORTHO05D001573 9.5e-07 57.4 68 35.3
Lj2P586T15 Lonicera japonica HOM05D001595 ORTHO05D001573 9.5e-07 57.4 77 37.7
Medtr3g049180 Medicago truncatula HOM05D001595 ORTHO05D001573 9.5e-07 57.4 88 33.0
Prupe.8G031900 Prunus persica HOM05D001595 ORTHO05D001573 9.5e-07 57.4 118 25.4
VMungo0251G0665 Vigna mungo HOM05D001595 ORTHO05D001573 9.5e-07 57.4 90 28.9
MD10G1029400 Malus domestica HOM05D001595 ORTHO05D001573 1.6e-06 56.6 119 26.9
Prupe.I003300 Prunus persica HOM05D001595 ORTHO05D001573 2.1e-06 56.2 128 25.8
Rhsim10G0143700 Rhododendron simsii HOM05D001595 ORTHO05D001573 2.1e-06 56.2 73 35.6
FAN15G2959 Fragaria x ananassa HOM05D001595 ORTHO05D001573 2.8e-06 55.8 86 27.9
Nitab4.5_0002138g0050 Nicotiana tabacum HOM05D001595 ORTHO05D001573 2.8e-06 55.8 79 35.4
PSO478G4628 Papaver somniferum HOM05D001595 ORTHO05D001573 2.8e-06 55.8 71 35.2
Phvul.003G272700 Phaseolus vulgaris HOM05D001595 ORTHO05D001573 2.8e-06 55.8 116 27.6
Sed0014305 Sechium edule HOM05D001595 ORTHO05D001573 2.8e-06 55.8 83 28.9
Glyma.09G195200 Glycine max HOM05D001595 ORTHO05D001573 3.6e-06 55.5 115 27.8
FAN20G0442 Fragaria x ananassa HOM05D001595 ORTHO05D001573 4.7e-06 55.1 86 27.9
Solyc11g005500.1 Solanum lycopersicum HOM05D001595 ORTHO05D001573 4.7e-06 55.1 75 32.0
Atru.chr8.1692 Acer truncatum HOM05D001595 ORTHO05D001573 6.2e-06 54.7 123 24.4
Ah.01g016040 Amaranthus hybridus HOM05D001595 ORTHO05D001573 6.2e-06 54.7 68 33.8
FvH4_2g13390 Fragaria vesca HOM05D001595 ORTHO05D001573 6.2e-06 54.7 86 26.7
Prupe.8G032300 Prunus persica HOM05D001595 ORTHO05D001573 6.2e-06 54.7 118 25.4
PGR044G0324 Punica granatum HOM05D001595 ORTHO05D001573 8.1e-06 54.3 107 27.1
RcHm_v2.0_Chr6g0284701 Rosa chinensis HOM05D001595 ORTHO05D001573 8.1e-06 54.3 125 28.0


User provided reference genes

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