Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa002786 Carpinus fangiana HOM05D008370 ORTHO05D009732 4.4e-33 144.1 73 100.0
Haze_25084 Corylus avellana HOM05D008370 ORTHO05D009732 4.4e-33 144.1 73 100.0
QL06p031379 Quercus lobata HOM05D008370 ORTHO05D009732 1.0e-18 96.3 73 69.9
CiPaw.04G088900 Carya illinoinensis HOM05D008370 ORTHO05D009732 2.4e-15 85.1 77 64.9
CiPaw.03G131600 Carya illinoinensis HOM05D008370 ORTHO05D009732 7.0e-15 83.6 74 62.2
Lj4g0015780 Lotus japonicus HOM05D008370 ORTHO05D009732 5.6e-12 73.9 71 59.2
Cfa002787 Carpinus fangiana HOM05D008370 ORTHO05D009732 4.7e-11 70.9 71 52.1
Lj1g0003311 Lotus japonicus HOM05D008370 ORTHO05D009732 4.7e-11 70.9 80 53.8
Thecc.07G145600 Theobroma cacao HOM05D008370 ORTHO05D009732 8.0e-11 70.1 70 52.9
Glyma.04G217800 Glycine max HOM05D008370 ORTHO05D009732 2.3e-10 68.6 74 58.1
Dinv05773 Davidia involucrata HOM05D008370 ORTHO05D009732 3.1e-10 68.2 74 56.8
Glyma.05G186300 Glycine max HOM05D008370 ORTHO05D009732 4.0e-10 67.8 71 53.5
Glyma.08G144800 Glycine max HOM05D008370 ORTHO05D009732 6.8e-10 67.0 71 57.7
Gohir.D03G047500 Gossypium hirsutum HOM05D008370 ORTHO05D009732 6.8e-10 67.0 72 52.8
TPR.G2226 Trifolium pratense HOM05D008370 ORTHO05D009732 1.2e-09 66.2 75 54.7
Glyma.06G148100 Glycine max HOM05D008370 ORTHO05D009732 2.0e-09 65.5 80 53.8
Gorai.003G048600 Gossypium raimondii HOM05D008370 ORTHO05D009732 2.0e-09 65.5 72 52.8
Thecc.01G117100 Theobroma cacao HOM05D008370 ORTHO05D009732 2.0e-09 65.5 72 54.2
Gohir.A01G042000 Gossypium hirsutum HOM05D008370 ORTHO05D009732 2.6e-09 65.1 72 51.4
Duzib147G0345 Durio zibethinus HOM05D008370 ORTHO05D009732 5.8e-09 63.9 75 52.0
Psat7g050080 Pisum sativum HOM05D008370 ORTHO05D009732 5.8e-09 63.9 72 52.8
COL.COLO4_17423 Corchorus olitorius HOM05D008370 ORTHO05D009732 7.5e-09 63.5 72 50.0
Gorai.002G039200 Gossypium raimondii HOM05D008370 ORTHO05D009732 7.5e-09 63.5 72 50.0
Phvul.009G138200 Phaseolus vulgaris HOM05D008370 ORTHO05D009732 7.5e-09 63.5 74 54.1
Actinidia01380 Actinidia chinensis HOM05D008370 ORTHO05D009732 1.3e-08 62.8 74 48.6
Manes.12G145500 Manihot esculenta HOM05D008370 ORTHO05D009732 1.7e-08 62.4 76 51.3
Prupe.6G166400 Prunus persica HOM05D008370 ORTHO05D009732 1.7e-08 62.4 76 56.6
Actinidia12221 Actinidia chinensis HOM05D008370 ORTHO05D009732 2.2e-08 62.0 73 54.8
CiPaw.04G088800 Carya illinoinensis HOM05D008370 ORTHO05D009732 2.2e-08 62.0 73 49.3
Prupe.6G166000 Prunus persica HOM05D015647 ORTHO05D009732 2.2e-08 62.0 79 50.6
CSS0039971 Camellia sinensis var. sinensis HOM05D008370 ORTHO05D009732 6.4e-08 60.5 72 52.8
COL.COLO4_22370 Corchorus olitorius HOM05D008370 ORTHO05D009732 1.4e-07 59.3 76 50.0
MD01G1015700 Malus domestica HOM05D008370 ORTHO05D009732 1.4e-07 59.3 74 47.3
Sabra07G0065300 Salix brachista HOM05D008370 ORTHO05D009732 1.9e-07 58.9 68 48.5
Potri.007G077300 Populus trichocarpa HOM05D008370 ORTHO05D009732 3.2e-07 58.2 69 50.7
Gohir.A02G136703 Gossypium hirsutum HOM05D008370 ORTHO05D009732 4.1e-07 57.8 76 50.0
Gohir.D01G030000 Gossypium hirsutum HOM05D008370 ORTHO05D009732 4.1e-07 57.8 72 48.6
Phvul.002G267404 Phaseolus vulgaris HOM05D008370 ORTHO05D009732 5.4e-07 57.4 72 47.2
Eucgr.I00294 Eucalyptus grandis HOM05D008370 ORTHO05D009732 9.2e-07 56.6 69 46.4
Lalb_Chr12g0203411 Lupinus albus HOM05D008370 ORTHO05D009732 9.2e-07 56.6 76 46.1
TPR.G2215 Trifolium pratense HOM05D010746 ORTHO05D009732 1.6e-06 55.8 76 47.4
Potri.005G087000 Populus trichocarpa HOM05D008370 ORTHO05D009732 2.7e-06 55.1 69 47.8
arahy.Tifrunner.gnm1.ann1.G5B6SC Arachis hypogaea HOM05D008370 ORTHO05D009732 3.5e-06 54.7 78 43.6
Manes.13G080360 Manihot esculenta HOM05D008370 ORTHO05D009732 3.5e-06 54.7 77 45.5


User provided reference genes

Program Settings