Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa002713 Carpinus fangiana HOM05D006072 ORTHO05D007363 2.9e-64 248.4 128 100.0
Haze_24990 Corylus avellana HOM05D006072 ORTHO05D007363 2.2e-24 115.9 132 56.8
Cfa002714 Carpinus fangiana HOM05D006072 ORTHO05D007363 1.9e-23 112.8 133 56.4
Lj4g0019082 Lotus japonicus HOM05D006072 ORTHO05D007363 5.0e-16 88.2 137 40.9
Lsat_1_v5_gn_1_2900 Lactuca sativa HOM05D006072 ORTHO05D007363 1.9e-15 86.3 126 46.0
QL06p050421 Quercus lobata HOM05D006072 ORTHO05D007363 1.9e-15 86.3 138 42.8
Haze_05750 Corylus avellana HOM05D006072 ORTHO05D007363 9.4e-15 84.0 57 82.5
Atru.chr4.239 Acer truncatum HOM05D006072 ORTHO05D007363 2.1e-14 82.8 127 44.9
CiPaw.03G138500 Carya illinoinensis HOM05D006072 ORTHO05D007363 3.6e-14 82.0 121 45.5
Medtr4g075230 Medicago truncatula HOM05D006072 ORTHO05D007363 3.6e-14 82.0 131 38.9
TPR.G2161 Trifolium pratense HOM05D006072 ORTHO05D007363 3.6e-14 82.0 131 40.5
Medtr8g091400 Medicago truncatula HOM05D006072 ORTHO05D007363 6.1e-14 81.3 131 38.2
Psat7g053120 Pisum sativum HOM05D006072 ORTHO05D007363 8.0e-14 80.9 129 41.9
Medtr8g092370 Medicago truncatula HOM05D006072 ORTHO05D007363 1.0e-13 80.5 131 38.2
Medtr8g092700 Medicago truncatula HOM05D006072 ORTHO05D007363 1.0e-13 80.5 131 38.2
CANSAT01G0770 Cannabis sativa HOM05D006072 ORTHO05D007363 1.4e-13 80.1 82 54.9
Phvul.002G262300 Phaseolus vulgaris HOM05D006072 ORTHO05D007363 4.0e-13 78.6 122 41.0
Glyma.05G181300 Glycine max HOM05D006072 ORTHO05D007363 8.8e-13 77.4 131 42.7
VMungo0251G2066 Vigna mungo HOM05D006072 ORTHO05D007363 1.2e-12 77.0 122 40.2
Ca_17713_v3 Cicer arietinum L. HOM05D006072 ORTHO05D007363 1.5e-12 76.6 123 42.3
Lalb_Chr12g0203671 Lupinus albus HOM05D006072 ORTHO05D007363 1.5e-12 76.6 128 39.1
Glyma.08G139000 Glycine max HOM05D006072 ORTHO05D007363 2.0e-12 76.3 136 39.0
Lalb_Chr07g0184981 Lupinus albus HOM05D006072 ORTHO05D007363 2.0e-12 76.3 122 41.8
Thecc.01G107000 Theobroma cacao HOM05D006072 ORTHO05D007363 9.8e-12 73.9 85 48.2
Sabra07G0072700 Salix brachista HOM05D006072 ORTHO05D007363 1.4e-10 70.1 125 38.4
Gohir.A11G199500 Gossypium hirsutum HOM05D006072 ORTHO05D007363 4.1e-10 68.6 136 36.8
Gohir.D11G224600 Gossypium hirsutum HOM05D006072 ORTHO05D007363 4.1e-10 68.6 136 36.8
Gorai.007G241900 Gossypium raimondii HOM05D006072 ORTHO05D007363 5.4e-10 68.2 136 36.8
Potri.005G079500 Populus trichocarpa HOM05D006072 ORTHO05D007363 5.4e-10 68.2 123 43.1
ECA246G2885 Erigeron canadensis HOM05D006072 ORTHO05D007363 7.0e-10 67.8 121 41.3
Duzib147G1157 Durio zibethinus HOM05D006072 ORTHO05D007363 1.6e-09 66.6 86 46.5
Ciclev10025690m.g Citrus clementina HOM05D006072 ORTHO05D007363 2.0e-09 66.2 96 45.8
Lsat_1_v5_gn_2_61421 Lactuca sativa HOM05D006072 ORTHO05D029972 3.5e-09 65.5 78 48.7
Dinv16779 Davidia involucrata HOM05D006072 ORTHO05D007363 4.5e-09 65.1 108 40.7
Lsat_1_v5_gn_4_172441 Lactuca sativa HOM05D006072 ORTHO05D007363 4.5e-09 65.1 78 48.7
Manes.12G138600 Manihot esculenta HOM05D006072 ORTHO05D007363 5.9e-09 64.7 120 40.8
Lsat_1_v5_gn_3_92501 Lactuca sativa HOM05D006072 ORTHO05D007363 7.7e-09 64.3 114 41.2
Nn3g18504 Nelumbo nucifera HOM05D006072 ORTHO05D007363 1.0e-08 63.9 150 36.7
Rhsim13G0107200 Rhododendron simsii HOM05D006072 ORTHO05D007363 1.0e-08 63.9 81 44.4
Sc18g0004880 Simmondsia chinensis HOM05D006072 ORTHO05D007363 1.3e-08 63.5 74 47.3
Duzib187G0709 Durio zibethinus HOM05D006072 ORTHO05D007363 1.7e-08 63.2 129 35.7
DCAR_023269 Daucus carota HOM05D006072 ORTHO05D007363 2.2e-08 62.8 101 47.5
TAR622G0191 Trochodendron aralioides HOM05D006072 ORTHO05D007363 3.8e-08 62.0 121 41.3
EL10Ac1g00741 Beta vulgaris HOM05D006072 ORTHO05D007363 5.0e-08 61.6 119 40.3
GSVIVG01011570001 Vitis vinifera HOM05D006072 ORTHO05D007363 5.0e-08 61.6 131 40.5
Actinidia24189 Actinidia chinensis HOM05D006072 ORTHO05D007363 6.5e-08 61.2 132 36.4
Ca_20317_v3 Cicer arietinum L. HOM05D006072 ORTHO05D007363 6.5e-08 61.2 78 48.7
Dinv07032 Davidia involucrata HOM05D006072 ORTHO05D007363 1.1e-07 60.5 116 42.2
GSVIVG01011561001 Vitis vinifera HOM05D006072 ORTHO05D007363 5.5e-07 58.2 46 58.7
Hma1.2p1_0281F.1_g113250 Hydrangea macrophylla HOM05D006072 ORTHO05D007363 7.2e-07 57.8 57 54.4
Rhsim09G0083300 Rhododendron simsii HOM05D006072 ORTHO05D007363 9.4e-07 57.4 60 51.7
AUR62003481 Chenopodium quinoa HOM05D006072 ORTHO05D007363 1.2e-06 57.0 107 34.6
AUR62017790 Chenopodium quinoa HOM05D006072 ORTHO05D007363 1.2e-06 57.0 107 34.6
TAR629G3443 Trochodendron aralioides HOM05D006072 ORTHO05D007363 1.2e-06 57.0 127 37.0
Cpa.g.sc131.23 Carica papaya HOM05D006072 ORTHO05D007363 1.6e-06 56.6 118 35.6
Hma1.2p1_0523F.1_g172190 Hydrangea macrophylla HOM05D006072 ORTHO05D007363 2.7e-06 55.8 57 52.6
AUR62015493 Chenopodium quinoa HOM05D006072 ORTHO05D007363 3.6e-06 55.5 107 33.6
GSVIVG01011560001 Vitis vinifera HOM05D006072 ORTHO05D007363 4.7e-06 55.1 113 36.3
Actinidia12426 Actinidia chinensis HOM05D006072 ORTHO05D007363 6.1e-06 54.7 45 60.0
Cc01_g19360 Coffea canephora HOM05D006072 ORTHO05D007363 8.0e-06 54.3 46 54.3


User provided reference genes

Program Settings