Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa002512 Carpinus fangiana HOM05D009210 ORTHO05D010367 0.0e+00 1229.2 593 100.0
Haze_24738 Corylus avellana HOM05D009210 ORTHO05D010367 1.3e-146 524.2 284 89.4
QL09p043802 Quercus lobata HOM05D009210 ORTHO05D010367 3.3e-139 499.6 596 49.0
QL07p009176 Quercus lobata HOM05D009210 ORTHO05D010367 9.1e-137 491.5 596 48.5
QL09p043508 Quercus lobata HOM05D009210 ORTHO05D010367 9.1e-137 491.5 596 48.5
QL09p043653 Quercus lobata HOM05D009210 ORTHO05D010367 3.2e-134 483.0 596 48.5
QL09p043642 Quercus lobata HOM05D009210 ORTHO05D010367 6.1e-109 399.1 395 57.5
Manes.13G042500 Manihot esculenta HOM05D009210 ORTHO05D010367 4.2e-57 226.9 585 30.9
Ciclev10019870m.g Citrus clementina HOM05D009210 ORTHO05D010367 3.9e-55 220.3 605 29.8
Actinidia30107 Actinidia chinensis HOM05D009210 ORTHO05D010367 8.1e-53 212.6 601 28.1
TWI59G1397 Tripterygium wilfordii HOM05D009210 ORTHO05D010367 8.1e-53 212.6 590 32.0
FAN15G1208 Fragaria x ananassa HOM05D016859 ORTHO05D010367 5.8e-51 206.5 606 29.5
Dinv19248 Davidia involucrata HOM05D009210 ORTHO05D010367 2.2e-50 204.5 387 36.2
Prupe.8G209900 Prunus persica HOM05D016859 ORTHO05D010367 1.4e-49 201.8 603 27.9
FvH4_2g19950 Fragaria vesca HOM05D016859 ORTHO05D010367 3.2e-49 200.7 611 28.8
FAN27G2643 Fragaria x ananassa HOM05D016859 ORTHO05D010367 3.2e-49 200.7 605 29.8
FAN24G1655 Fragaria x ananassa HOM05D016859 ORTHO05D010367 1.6e-48 198.4 611 28.8
RcHm_v2.0_Chr6g0285611 Rosa chinensis HOM05D016859 ORTHO05D010367 4.6e-48 196.8 660 28.3
Duzib211G0683 Durio zibethinus HOM05D009210 ORTHO05D010367 2.8e-45 187.6 613 28.7
MD10G1171500 Malus domestica HOM05D016859 ORTHO05D010367 3.7e-45 187.2 386 35.5
Thecc.01G245200 Theobroma cacao HOM05D009210 ORTHO05D010367 4.5e-43 180.3 604 28.6
Atru.chr5.1922 Acer truncatum HOM05D009210 ORTHO05D010367 2.5e-38 164.5 429 31.7
QL09p043548 Quercus lobata HOM05D002769 ORTHO05D010367 1.3e-37 162.2 317 37.2
Ca_09627_v3 Cicer arietinum L. HOM05D014010 ORTHO05D010367 1.6e-37 161.8 589 28.7
Gohir.D07G208750 Gossypium hirsutum HOM05D009210 ORTHO05D010367 6.3e-37 159.8 560 26.4
Lj1A79G19 Lonicera japonica HOM05D009210 ORTHO05D010367 1.3e-34 152.1 590 25.9
Phvul.007G155700 Phaseolus vulgaris HOM05D014010 ORTHO05D010367 1.2e-32 145.6 593 27.7
Nn3g19852 Nelumbo nucifera HOM05D009210 ORTHO05D010367 1.6e-32 145.2 617 27.1
Glyma.13G129600 Glycine max HOM05D014010 ORTHO05D010367 3.0e-31 141.0 588 26.7
Lj5g0020428 Lotus japonicus HOM05D014010 ORTHO05D010367 5.1e-31 140.2 612 26.3
COL.COLO4_08165 Corchorus olitorius HOM05D009210 ORTHO05D010367 8.2e-29 132.9 589 25.0
Medtr1g069195 Medicago truncatula HOM05D014010 ORTHO05D010367 1.4e-28 132.1 653 25.1
Psat6g065120 Pisum sativum HOM05D014010 ORTHO05D010367 3.8e-26 124.0 628 24.8
Gohir.A07G202550 Gossypium hirsutum HOM05D009210 ORTHO05D010367 8.5e-26 122.9 192 35.9
Gorai.001G235700 Gossypium raimondii HOM05D009210 ORTHO05D010367 8.5e-26 122.9 192 36.5
DCAR_000542 Daucus carota HOM05D009210 ORTHO05D010367 6.1e-24 116.7 585 24.3
CANSAT01G1047 Cannabis sativa HOM05D009210 ORTHO05D010367 2.0e-22 111.7 536 26.5
VMungo0720G0709 Vigna mungo HOM05D014010 ORTHO05D010367 2.2e-21 108.2 607 25.0
Lalb_Chr02g0152931 Lupinus albus HOM05D014010 ORTHO05D010367 2.9e-18 97.8 434 26.3
Cpa.g.sc8.212 Carica papaya HOM05D009210 ORTHO05D010367 1.5e-17 95.5 156 37.8
Duzib133G1530 Durio zibethinus HOM05D009210 ORTHO05D010367 3.6e-16 90.9 255 31.0
CSS0048272 Camellia sinensis var. sinensis HOM05D009210 ORTHO05D010367 5.2e-15 87.0 208 33.7
TPR.G25869 Trifolium pratense HOM05D014010 ORTHO05D010367 8.8e-15 86.3 108 45.4
Hund18342 Selenicereus undatus HOM05D017699 ORTHO05D019543 1.6e-11 75.5 392 24.7
arahy.Tifrunner.gnm1.ann1.201IN6 Arachis hypogaea HOM05D014010 ORTHO05D010367 3.5e-11 74.3 300 28.0
QL09p043739 Quercus lobata HOM05D002769 ORTHO05D003160 2.9e-10 71.2 74 55.4
Oeu052100.2 Olea europaea HOM05D013334 ORTHO05D015998 6.5e-10 70.1 200 33.0
Atru.chr5.1921 Acer truncatum HOM05D009210 ORTHO05D010367 2.1e-08 65.1 54 57.4
CiPaw.04G192300 Carya illinoinensis HOM05D009210 ORTHO05D010367 3.6e-08 64.3 41 73.2
PGR044G0436 Punica granatum HOM05D009210 ORTHO05D010367 6.1e-08 63.5 400 25.2
ECA236G3347 Erigeron canadensis HOM05D040207 ORTHO05D010367 3.0e-07 61.2 91 41.8
GSVIVG01028482001 Vitis vinifera HOM05D009210 ORTHO05D010367 6.8e-07 60.1 54 59.3
AUR62008852 Chenopodium quinoa HOM05D017699 ORTHO05D019543 8.8e-07 59.7 222 27.0
ClCG09G009440 Citrullus lanatus HOM05D026148 ORTHO05D010367 4.4e-06 57.4 125 33.6
HanXRQChr13g0408971 Helianthus annuus HOM05D040207 ORTHO05D010367 4.4e-06 57.4 118 34.7
MSTRG.17532 Avicennia marina HOM05D013334 ORTHO05D015998 5.7e-06 57.0 178 29.8
Sp3g33480 Schrenkiella parvula HOM05D012015 ORTHO05D014750 7.5e-06 56.6 124 33.1
Actinidia37568 Actinidia chinensis HOM05D009210 ORTHO05D010367 9.7e-06 56.2 118 37.3


User provided reference genes

Program Settings