Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa002510 Carpinus fangiana HOM05D003512 ORTHO05D004013 5.1e-39 164.5 118 100.0
Haze_24736 Corylus avellana HOM05D003512 ORTHO05D004013 1.6e-32 142.9 144 76.4
QL09p043416 Quercus lobata HOM05D003512 ORTHO05D004013 4.9e-26 121.3 139 54.0
Duzib211G0535 Durio zibethinus HOM05D003512 ORTHO05D004013 1.6e-24 116.3 142 67.6
Manes.12G040000 Manihot esculenta HOM05D003512 ORTHO05D004013 4.6e-24 114.8 148 57.4
Duzib138G0098 Durio zibethinus HOM05D003512 ORTHO05D004013 1.7e-23 112.8 144 68.8
Thecc.01G245400 Theobroma cacao HOM05D003512 ORTHO05D004013 1.7e-23 112.8 142 69.0
Sabra02G0192900 Salix brachista HOM05D003512 ORTHO05D004013 1.9e-22 109.4 159 44.7
Ciclev10022750m.g Citrus clementina HOM05D003512 ORTHO05D004013 3.3e-22 108.6 144 63.9
Potri.002G253800 Populus trichocarpa HOM05D003512 ORTHO05D004013 4.3e-22 108.2 141 51.1
Ca_08765_v3 Cicer arietinum L. HOM05D003512 ORTHO05D004013 2.8e-21 105.5 139 51.1
Lsat_1_v5_gn_8_90440 Lactuca sativa HOM05D003512 ORTHO05D004013 2.8e-21 105.5 138 49.3
MD10G1171800 Malus domestica HOM05D003512 ORTHO05D004013 2.8e-21 105.5 146 56.8
FvH4_2g19960 Fragaria vesca HOM05D003512 ORTHO05D004013 3.6e-21 105.1 142 49.3
HanXRQChr13g0408961 Helianthus annuus HOM05D003512 ORTHO05D004013 4.8e-21 104.8 138 47.8
Lalb_Chr06g0170911 Lupinus albus HOM05D003512 ORTHO05D004013 1.1e-20 103.6 140 47.1
FAN15G0220 Fragaria x ananassa HOM05D003512 ORTHO05D004013 1.4e-20 103.2 142 47.2
HanXRQChr10g0287201 Helianthus annuus HOM05D003512 ORTHO05D004013 1.4e-20 103.2 138 47.8
Ca_09628_v3 Cicer arietinum L. HOM05D003512 ORTHO05D004013 1.8e-20 102.8 141 49.6
Lalb_Chr02g0152921 Lupinus albus HOM05D003512 ORTHO05D004013 1.8e-20 102.8 159 50.9
Duzib133G0561 Durio zibethinus HOM05D003512 ORTHO05D004013 2.4e-20 102.4 142 58.5
MD05G1183900 Malus domestica HOM05D003512 ORTHO05D004013 2.4e-20 102.4 146 47.9
Medtr7g099390 Medicago truncatula HOM05D003512 ORTHO05D004013 2.4e-20 102.4 144 49.3
RcHm_v2.0_Chr6g0285621 Rosa chinensis HOM05D003512 ORTHO05D004013 3.1e-20 102.1 146 47.9
FAN27G0931 Fragaria x ananassa HOM05D003512 ORTHO05D004013 4.0e-20 101.7 142 48.6
ECA247G0853 Erigeron canadensis HOM05D003512 ORTHO05D004013 9.0e-20 100.5 137 57.7
Lalb_Chr21g0314191 Lupinus albus HOM05D003512 ORTHO05D004013 9.0e-20 100.5 146 54.8
TWI23G0432 Tripterygium wilfordii HOM05D003512 ORTHO05D004013 9.0e-20 100.5 140 45.0
Nitab4.5_0004777g0040 Nicotiana tabacum HOM05D003512 ORTHO05D004013 1.2e-19 100.1 143 55.2
Gohir.D07G208800 Gossypium hirsutum HOM05D003512 ORTHO05D004013 2.6e-19 99.0 142 64.8
Gohir.A07G202600 Gossypium hirsutum HOM05D003512 ORTHO05D004013 3.4e-19 98.6 146 63.0
Medtr1g069235 Medicago truncatula HOM05D003512 ORTHO05D004013 4.5e-19 98.2 147 53.1
Atru.chr5.1920 Acer truncatum HOM05D003512 ORTHO05D004013 5.8e-19 97.8 142 54.2
Thhalv10026332m.g Eutrema salsugineum HOM05D003512 ORTHO05D004013 5.8e-19 97.8 115 58.3
CiPaw.03G273300 Carya illinoinensis HOM05D003512 ORTHO05D004013 7.6e-19 97.4 138 63.0
Lalb_Chr25g0289731 Lupinus albus HOM05D003512 ORTHO05D004013 9.9e-19 97.1 143 46.9
TWI59G0010 Tripterygium wilfordii HOM05D003512 ORTHO05D004013 9.9e-19 97.1 140 57.9
Nn1g03078 Nelumbo nucifera HOM05D003512 ORTHO05D004013 1.3e-18 96.7 118 65.3
Nn3g19853 Nelumbo nucifera HOM05D003512 ORTHO05D004013 1.7e-18 96.3 115 53.9
Cpa.g.sc8.213 Carica papaya HOM05D003512 ORTHO05D004013 2.2e-18 95.9 144 63.9
HanXRQChr15g0468101 Helianthus annuus HOM05D003512 ORTHO05D004013 2.9e-18 95.5 140 52.1
Solyc06g083680.3 Solanum lycopersicum HOM05D003512 ORTHO05D004013 2.9e-18 95.5 140 64.3
Sopen06g035100 Solanum pennellii HOM05D003512 ORTHO05D004013 2.9e-18 95.5 140 61.4
vmacro19972 Vaccinium macrocarpon HOM05D003512 ORTHO05D004013 4.9e-18 94.7 145 64.8
Hma1.2p1_0123F.1_g058160 Hydrangea macrophylla HOM05D003512 ORTHO05D004013 6.4e-18 94.4 146 52.1
PGSC0003DMG400022022 Solanum tuberosum HOM05D003512 ORTHO05D004013 6.4e-18 94.4 144 47.2
Gohir.D08G056700 Gossypium hirsutum HOM05D003512 ORTHO05D004013 8.4e-18 94.0 148 62.2
arahy.Tifrunner.gnm1.ann1.QW0L8Q Arachis hypogaea HOM05D003512 ORTHO05D004013 1.4e-17 93.2 143 45.5
Manes.13G042400 Manihot esculenta HOM05D003512 ORTHO05D004013 2.4e-17 92.4 146 57.5
Gorai.001G235800 Gossypium raimondii HOM05D003512 ORTHO05D004013 3.2e-17 92.0 145 50.3
Oeu047197.1 Olea europaea HOM05D003512 ORTHO05D004013 3.2e-17 92.0 138 45.7
Sopen09g025300 Solanum pennellii HOM05D003512 ORTHO05D004013 4.2e-17 91.7 143 46.9
Aqoxy5G00078 Aquilegia oxysepala HOM05D003512 ORTHO05D004013 7.1e-17 90.9 146 44.5
Gorai.004G057800 Gossypium raimondii HOM05D003512 ORTHO05D004013 7.1e-17 90.9 148 61.5
CARHR110760 Cardamine hirsuta HOM05D003512 ORTHO05D004013 9.3e-17 90.5 142 45.1
TAR362G0114 Trochodendron aralioides HOM05D003512 ORTHO05D004013 9.3e-17 90.5 140 62.9
Gohir.A08G046200 Gossypium hirsutum HOM05D003512 ORTHO05D004013 1.2e-16 90.1 148 59.5
Solyc09g063130.3 Solanum lycopersicum HOM05D003512 ORTHO05D004013 1.2e-16 90.1 143 46.2
Sp7g26760 Schrenkiella parvula HOM05D003512 ORTHO05D004013 1.6e-16 89.7 140 43.6
arahy.Tifrunner.gnm1.ann1.TN6DUA Arachis hypogaea HOM05D003512 ORTHO05D004013 2.1e-16 89.4 144 56.2
PGR142G3520 Punica granatum HOM05D003512 ORTHO05D004013 2.1e-16 89.4 144 50.0
FAN24G0321 Fragaria x ananassa HOM05D003512 ORTHO05D004013 2.7e-16 89.0 184 38.0
EL10Ac7g17751 Beta vulgaris HOM05D003512 ORTHO05D004013 4.6e-16 88.2 45 88.9
Peaxi162Scf00517g00118 Petunia axillaris HOM05D003512 ORTHO05D004013 4.6e-16 88.2 141 61.7
A01p09160 Brassica napus HOM05D003512 ORTHO05D004013 6.0e-16 87.8 140 44.3
CANSAT01G3044 Cannabis sativa HOM05D003512 ORTHO05D004013 6.0e-16 87.8 74 66.2
TWI34G1801 Tripterygium wilfordii HOM05D003512 ORTHO05D004013 6.0e-16 87.8 145 46.2
CARHR236540 Cardamine hirsuta HOM05D003512 ORTHO05D004013 7.9e-16 87.4 135 44.4
Prupe.8G210000 Prunus persica HOM05D003512 ORTHO05D004013 7.9e-16 87.4 148 56.8
Gohir.A11G135000 Gossypium hirsutum HOM05D003512 ORTHO05D004013 1.0e-15 87.0 142 58.5
Gohir.D11G141200 Gossypium hirsutum HOM05D003512 ORTHO05D004013 1.0e-15 87.0 142 62.0
Gorai.007G151500 Gossypium raimondii HOM05D003512 ORTHO05D004013 1.0e-15 87.0 142 62.0
COL.COLO4_36321 Corchorus olitorius HOM05D003512 ORTHO05D004013 1.3e-15 86.7 154 42.2
Aa31LG2G21620 Aethionema arabicum HOM05D003512 ORTHO05D004013 1.8e-15 86.3 137 43.8
DCAR_012618 Daucus carota HOM05D003512 ORTHO05D004013 1.8e-15 86.3 141 44.0
ECA236G1700 Erigeron canadensis HOM05D003512 ORTHO05D004013 2.3e-15 85.9 135 43.0
Hma1.2p1_1393F.1_g280270 Hydrangea macrophylla HOM05D003512 ORTHO05D004013 2.3e-15 85.9 175 45.1
MBI07_g08920_MAGBIO Magnolia biondii HOM05D003512 ORTHO05D004013 2.3e-15 85.9 44 90.9
Oeu026192.1 Olea europaea HOM05D003512 ORTHO05D004013 2.3e-15 85.9 138 44.2
TPR.G20608 Trifolium pratense HOM05D003512 ORTHO05D004013 2.3e-15 85.9 71 66.2
Aa31LG8G17250 Aethionema arabicum HOM05D003512 ORTHO05D004013 3.0e-15 85.5 75 62.7
Peaxi162Scf00043g00067 Petunia axillaris HOM05D003512 ORTHO05D004013 3.0e-15 85.5 144 50.0
Rhsim13G0041600 Rhododendron simsii HOM05D003512 ORTHO05D004013 5.1e-15 84.7 141 42.6
Dinv43039 Davidia involucrata HOM05D003512 ORTHO05D004013 8.7e-15 84.0 138 60.1
Thhalv10002106m.g Eutrema salsugineum HOM05D003512 ORTHO05D004013 8.7e-15 84.0 146 56.8
Nitab4.5_0004333g0020 Nicotiana tabacum HOM05D003512 ORTHO05D004013 1.1e-14 83.6 144 57.6
vmacro02722 Vaccinium macrocarpon HOM05D003512 ORTHO05D004013 1.1e-14 83.6 137 44.5
BcaC07g38359 Brassica carinata HOM05D003512 ORTHO05D004013 1.5e-14 83.2 140 51.4
C08p11070 Brassica napus HOM05D003512 ORTHO05D004013 1.5e-14 83.2 140 51.4
BraA01t00862Z Brassica rapa HOM05D003512 ORTHO05D004013 1.5e-14 83.2 140 46.4
COL.COLO4_07003 Corchorus olitorius HOM05D003512 ORTHO05D004013 1.5e-14 83.2 154 55.2
Hund21755 Selenicereus undatus HOM05D003512 ORTHO05D004013 1.5e-14 83.2 75 61.3
THA.LOC104820062 Tarenaya hassleriana HOM05D003512 ORTHO05D004013 1.5e-14 83.2 71 64.8
BolC8t48776H Brassica oleracea HOM05D003512 ORTHO05D004013 1.9e-14 82.8 140 50.0
MSTRG.21447 Avicennia marina HOM05D003512 ORTHO05D004013 2.5e-14 82.4 151 54.3
A08p19920 Brassica napus HOM05D003512 ORTHO05D004013 2.5e-14 82.4 140 50.7
BraA08t33949Z Brassica rapa HOM05D003512 ORTHO05D004013 2.5e-14 82.4 140 50.7
Carub.0003s3459 Capsella rubella HOM05D003512 ORTHO05D004013 2.5e-14 82.4 70 64.3
Thecc.05G265600 Theobroma cacao HOM05D003512 ORTHO05D004013 2.5e-14 82.4 156 59.0
CDE02G1659 Ceratophyllum demersum HOM05D003512 ORTHO05D004013 4.3e-14 81.6 138 42.0
Lsat_1_v5_gn_2_15600 Lactuca sativa HOM05D003512 ORTHO05D004013 5.6e-14 81.3 149 51.0
arahy.Tifrunner.gnm1.ann1.DHZ2RQ Arachis hypogaea HOM05D003512 ORTHO05D004013 7.4e-14 80.9 150 54.0
Sed0015250 Sechium edule HOM05D003512 ORTHO05D004013 7.4e-14 80.9 138 43.5
AL7G23750 Arabidopsis lyrata HOM05D003512 ORTHO05D004013 9.6e-14 80.5 139 50.4
arahy.Tifrunner.gnm1.ann1.HB1P9N Arachis hypogaea HOM05D003512 ORTHO05D004013 9.6e-14 80.5 150 52.0
THA.LOC104804030 Tarenaya hassleriana HOM05D003512 ORTHO05D004013 9.6e-14 80.5 146 42.5
AT2G20260 Arabidopsis thaliana HOM05D003512 ORTHO05D004013 1.3e-13 80.1 144 50.7
CAN.G771.48 Capsicum annuum HOM05D003512 ORTHO05D004013 1.3e-13 80.1 74 62.2
Nitab4.5_0001557g0070 Nicotiana tabacum HOM05D003512 ORTHO05D004013 1.3e-13 80.1 127 55.9
ClCG11G010230 Citrullus lanatus HOM05D003512 ORTHO05D004013 1.6e-13 79.7 73 60.3
Eucgr.H00828 Eucalyptus grandis HOM05D003512 ORTHO05D004013 1.6e-13 79.7 138 60.9
Sp3g33490 Schrenkiella parvula HOM05D003512 ORTHO05D004013 1.6e-13 79.7 146 50.0
THA.LOC104814542 Tarenaya hassleriana HOM05D003512 ORTHO05D004013 1.6e-13 79.7 140 43.6
HanXRQChr11g0327281 Helianthus annuus HOM05D003512 ORTHO05D004013 2.1e-13 79.3 150 55.3
Lsat_1_v5_gn_9_12001 Lactuca sativa HOM05D003512 ORTHO05D004013 2.1e-13 79.3 138 55.1
Zm00001eb096870 Zea mays HOM05D003512 ORTHO05D004013 2.1e-13 79.3 140 40.7
Eucgr.B02162 Eucalyptus grandis HOM05D003512 ORTHO05D004013 2.8e-13 79.0 143 44.1
PSO832G4467 Papaver somniferum HOM05D003512 ORTHO05D004013 2.8e-13 79.0 142 60.6
PSO764G0144 Papaver somniferum HOM05D003512 ORTHO05D004013 4.8e-13 78.2 142 60.6
TWI32G0368 Tripterygium wilfordii HOM05D003512 ORTHO05D004013 4.8e-13 78.2 68 61.8
VMungo0720G2276 Vigna mungo HOM05D003512 ORTHO05D004013 4.8e-13 78.2 136 50.0
CsaV3_2G010090 Cucumis sativus L. HOM05D003512 ORTHO05D004013 6.2e-13 77.8 72 59.7
Phvul.008G133700 Phaseolus vulgaris HOM05D003512 ORTHO05D004013 8.1e-13 77.4 135 48.9
Lj5g0026666 Lotus japonicus HOM05D003512 ORTHO05D004013 1.1e-12 77.0 135 45.2
Hund18341 Selenicereus undatus HOM05D003512 ORTHO05D004013 1.1e-12 77.0 67 62.7
Dinv19249 Davidia involucrata HOM05D003512 ORTHO05D004013 1.4e-12 76.6 72 59.7
PGSC0003DMG400020154 Solanum tuberosum HOM05D003512 ORTHO05D004013 1.4e-12 76.6 72 59.7
arahy.Tifrunner.gnm1.ann1.110G34 Arachis hypogaea HOM05D003512 ORTHO05D004013 1.8e-12 76.3 150 51.3
C01p10750 Brassica napus HOM05D003512 ORTHO05D004013 1.8e-12 76.3 140 41.4
BolC1t01034H Brassica oleracea HOM05D003512 ORTHO05D004013 1.8e-12 76.3 140 41.4
CDE09G0441 Ceratophyllum demersum HOM05D003512 ORTHO05D004013 1.8e-12 76.3 138 40.6
AUR62025395 Chenopodium quinoa HOM05D003512 ORTHO05D004013 1.8e-12 76.3 68 60.3
Os07g0435300 Oryza sativa ssp. japonica HOM05D003512 ORTHO05D004013 1.8e-12 76.3 74 58.1
BcaNung01368 Brassica carinata HOM05D003512 ORTHO05D004013 2.4e-12 75.9 140 45.0
Glyma.13G129400 Glycine max HOM05D003512 ORTHO05D004013 2.4e-12 75.9 135 48.9
Glyma.13G129500 Glycine max HOM05D003512 ORTHO05D004013 2.4e-12 75.9 135 50.4
Phvul.007G155500 Phaseolus vulgaris HOM05D003512 ORTHO05D004013 2.4e-12 75.9 136 48.5
Ah.08g213830 Amaranthus hybridus HOM05D003512 ORTHO05D004013 3.1e-12 75.5 67 59.7
BcaB03g12587 Brassica carinata HOM05D003512 ORTHO05D004013 3.1e-12 75.5 141 39.7
Zm00001eb306070 Zea mays HOM05D003512 ORTHO05D004013 3.1e-12 75.5 140 41.4
Actinidia30108 Actinidia chinensis HOM05D003512 ORTHO05D004013 4.0e-12 75.1 138 44.9
arahy.Tifrunner.gnm1.ann1.PI6GK2 Arachis hypogaea HOM05D003512 ORTHO05D004013 4.0e-12 75.1 150 51.3
CiPaw.04G192200 Carya illinoinensis HOM05D003512 ORTHO05D004013 5.3e-12 74.7 141 56.7
Glyma.10G042000 Glycine max HOM05D003512 ORTHO05D004013 5.3e-12 74.7 135 49.6
Glyma.10G042100 Glycine max HOM05D003512 ORTHO05D004013 5.3e-12 74.7 135 49.6
CSS0026330 Camellia sinensis var. sinensis HOM05D003512 ORTHO05D004013 9.0e-12 73.9 76 56.6
Oeu017338.1 Olea europaea HOM05D003512 ORTHO05D004013 9.0e-12 73.9 143 42.0
Carub.0007s1189 Capsella rubella HOM05D003512 ORTHO05D004013 1.2e-11 73.6 138 42.8
Ah.15g093440 Amaranthus hybridus HOM05D003512 ORTHO05D004013 1.5e-11 73.2 78 53.8
SEGI_17443 Sequoiadendron giganteum HOM05D003512 ORTHO05D004013 2.0e-11 72.8 75 56.0
BcaNung07172 Brassica carinata HOM05D003512 ORTHO05D004013 3.4e-11 72.0 138 43.5
BcaC06g32605 Brassica carinata HOM05D003512 ORTHO05D004013 4.5e-11 71.6 66 59.1
Rhsim05G0169700 Rhododendron simsii HOM05D003512 ORTHO05D004013 7.6e-11 70.9 65 61.5
AL3G47830 Arabidopsis lyrata HOM05D003512 ORTHO05D004013 9.9e-11 70.5 36 88.9
Actinidia37567 Actinidia chinensis HOM05D003512 ORTHO05D004013 1.7e-10 69.7 116 42.2
TAR365G0283 Trochodendron aralioides HOM05D003512 ORTHO05D004013 2.2e-10 69.3 140 57.1
DCAR_018535 Daucus carota HOM05D003512 ORTHO05D004013 3.8e-10 68.6 139 43.2
AT4G28750 Arabidopsis thaliana HOM05D003512 ORTHO05D004013 4.9e-10 68.2 139 49.6
Oeu039643.2 Olea europaea HOM05D003512 ORTHO05D004013 4.9e-10 68.2 143 57.3
CSS0050291 Camellia sinensis var. sinensis HOM05D003512 ORTHO05D004013 6.4e-10 67.8 149 57.0
CAN.G311.8 Capsicum annuum HOM05D003512 ORTHO05D004013 6.4e-10 67.8 136 45.6
Cc01_g17500 Coffea canephora HOM05D003512 ORTHO05D004013 8.4e-10 67.4 143 44.1
GSVIVG01028481001 Vitis vinifera HOM05D003512 ORTHO05D004013 8.4e-10 67.4 63 58.7
AUR62008851 Chenopodium quinoa HOM05D003512 ORTHO05D004013 1.1e-09 67.0 35 85.7
Migut.D00498 Erythranthe guttata HOM05D003512 ORTHO05D004013 1.1e-09 67.0 140 43.6
Nitab4.5_0000385g0230 Nicotiana tabacum HOM05D003512 ORTHO05D004013 1.9e-09 66.2 114 45.6
SalBow6G4606 Salvia bowleyana HOM05D003512 ORTHO05D004013 1.9e-09 66.2 138 56.5
HanXRQChr01g0014791 Helianthus annuus HOM05D003512 ORTHO05D004013 2.4e-09 65.9 34 88.2
Migut.N02242 Erythranthe guttata HOM05D003512 ORTHO05D004013 3.2e-09 65.5 153 35.9
Sed0000934 Sechium edule HOM05D003512 ORTHO05D004013 7.1e-09 64.3 144 40.3
HPP92_027295 Vanilla planifolia HOM05D003512 ORTHO05D004013 9.3e-09 63.9 62 56.5
AagrBONN_evm.TU.Sc2ySwM_344.4760 Anthoceros agrestis HOM05D003512 ORTHO05D004013 3.5e-08 62.0 75 52.0
SGA_v2.0_scaffold1G00682 Striga asiatica HOM05D003512 ORTHO05D004013 3.5e-08 62.0 155 45.8
unitig_22.g6316 Utricularia gibba HOM05D003512 ORTHO05D004013 3.5e-08 62.0 67 49.3
unitig_85.g27272 Utricularia gibba HOM05D003512 ORTHO05D004013 4.6e-08 61.6 71 50.7
MCO05G318 Micromonas commoda HOM05D003512 ORTHO05D004013 7.9e-08 60.8 74 55.4
ATR0787G081 Amborella trichopoda HOM05D003512 ORTHO05D004013 2.3e-07 59.3 143 39.2
CBR_g17684 Chara braunii HOM05D003512 ORTHO05D004013 2.3e-07 59.3 69 53.6
C07p56420 Brassica napus HOM05D003512 ORTHO05D004013 8.7e-07 57.4 39 64.1
SMO201G0191 Selaginella moellendorffii HOM05D003512 ORTHO05D004013 2.5e-06 55.8 71 46.5
Lsat_1_v5_gn_5_179160 Lactuca sativa HOM05D003512 ORTHO05D004013 3.3e-06 55.5 118 36.4
A07p00460 Brassica napus HOM05D003512 ORTHO05D004013 5.6e-06 54.7 33 81.8
PRCOL_00005723 Prasinoderma coloniale HOM05D003512 ORTHO05D004013 5.6e-06 54.7 31 83.9
Mapoly0061s0118 Marchantia polymorpha HOM05D003512 ORTHO05D004013 9.6e-06 53.9 66 43.9


User provided reference genes

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