Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa002442 Carpinus fangiana HOM05D006747 ORTHO05D008384 4.1e-145 518.1 271 100.0
Haze_24648 Corylus avellana HOM05D006747 ORTHO05D008384 3.8e-130 468.4 304 84.2
CiPaw.03G265900 Carya illinoinensis HOM05D006747 ORTHO05D008384 2.4e-121 439.1 285 80.0
GSVIVG01028355001 Vitis vinifera HOM05D006747 ORTHO05D008384 1.4e-113 413.3 271 79.0
Atru.chr5.1716 Acer truncatum HOM05D006747 ORTHO05D008384 1.9e-113 412.9 264 79.2
Dinv22393 Davidia involucrata HOM05D006747 ORTHO05D008384 4.2e-113 411.8 263 79.1
MD05G1195200 Malus domestica HOM05D006747 ORTHO05D008384 4.6e-112 408.3 264 79.2
Gorai.007G147500 Gossypium raimondii HOM05D006747 ORTHO05D008384 6.0e-112 407.9 262 76.7
Gohir.D11G137550 Gossypium hirsutum HOM05D006747 ORTHO05D008384 1.8e-111 406.4 262 76.0
Gohir.A11G131500 Gossypium hirsutum HOM05D006747 ORTHO05D008384 1.1e-110 403.7 262 76.3
Thecc.01G256100 Theobroma cacao HOM05D006747 ORTHO05D008384 1.5e-110 403.3 264 76.9
Ciclev10021655m.g Citrus clementina HOM05D006747 ORTHO05D008384 7.4e-110 401.0 243 81.1
Cc01_g18210 Coffea canephora HOM05D006747 ORTHO05D008384 7.4e-110 401.0 271 76.0
CANSAT01G1212 Cannabis sativa HOM05D006747 ORTHO05D008384 9.6e-110 400.6 269 74.7
FAN27G0389 Fragaria x ananassa HOM05D006747 ORTHO05D008384 1.6e-109 399.8 266 78.9
RcHm_v2.0_Chr6g0287851 Rosa chinensis HOM05D006747 ORTHO05D008384 1.6e-109 399.8 265 79.2
TAR362G0605 Trochodendron aralioides HOM05D006747 ORTHO05D008384 1.6e-109 399.8 271 76.4
FAN15G1911 Fragaria x ananassa HOM05D006747 ORTHO05D008384 3.7e-109 398.7 266 78.6
Duzib138G0743 Durio zibethinus HOM05D006747 ORTHO05D008384 8.2e-109 397.5 264 76.1
Lj5g0027576 Lotus japonicus HOM05D006747 ORTHO05D008384 1.1e-108 397.1 271 73.8
COL.COLO4_04026 Corchorus olitorius HOM05D006747 ORTHO05D008384 1.4e-108 396.7 296 70.6
Glyma.06G315300 Glycine max HOM05D006747 ORTHO05D008384 6.9e-108 394.4 279 73.8
Phvul.007G192000 Phaseolus vulgaris HOM05D006747 ORTHO05D008384 2.0e-107 392.9 271 75.3
Potri.005G225900 Populus trichocarpa HOM05D006747 ORTHO05D008384 3.4e-107 392.1 278 73.7
Actinidia30159 Actinidia chinensis HOM05D006747 ORTHO05D008384 5.8e-107 391.3 264 76.1
FAN20G2892 Fragaria x ananassa HOM05D006747 ORTHO05D008384 1.3e-106 390.2 270 77.0
Lalb_Chr06g0170541 Lupinus albus HOM05D006747 ORTHO05D008384 6.5e-106 387.9 271 73.1
Sabra05G0174300 Salix brachista HOM05D006747 ORTHO05D008384 8.4e-106 387.5 279 73.5
VMungo0720G1324 Vigna mungo HOM05D006747 ORTHO05D008384 1.1e-105 387.1 271 73.8
AL3G53500 Arabidopsis lyrata HOM05D006747 ORTHO05D008384 3.2e-105 385.6 243 76.5
Carub.0003s3494 Capsella rubella HOM05D006747 ORTHO05D008384 3.2e-105 385.6 279 69.5
Sopen06g003200 Solanum pennellii HOM05D006747 ORTHO05D008384 5.5e-105 384.8 267 74.9
Solyc06g008350.3 Solanum lycopersicum HOM05D006747 ORTHO05D008384 7.1e-105 384.4 267 74.9
CSS0000886 Camellia sinensis var. sinensis HOM05D006747 ORTHO05D008384 1.2e-104 383.6 256 76.2
TPR.G35130 Trifolium pratense HOM05D006747 ORTHO05D008384 1.2e-104 383.6 271 71.6
Eucgr.B01566 Eucalyptus grandis HOM05D006747 ORTHO05D008384 2.1e-104 382.9 238 78.6
Sp3g33710 Schrenkiella parvula HOM05D006747 ORTHO05D008384 4.6e-104 381.7 243 75.3
AT2G20495 Arabidopsis thaliana HOM05D006747 ORTHO05D008384 6.0e-104 381.3 250 74.4
Peaxi162Scf00987g00036 Petunia axillaris HOM05D006747 ORTHO05D008384 7.9e-104 380.9 271 72.3
Lsat_1_v5_gn_5_182940 Lactuca sativa HOM05D006747 ORTHO05D008384 1.0e-103 380.6 269 71.0
PGSC0003DMG400025504 Solanum tuberosum HOM05D006747 ORTHO05D008384 3.0e-103 379.0 272 72.1
Migut.D00438 Erythranthe guttata HOM05D006747 ORTHO05D008384 3.9e-103 378.6 237 77.6
Psat6g054040 Pisum sativum HOM05D006747 ORTHO05D008384 6.7e-103 377.9 271 69.7
Rhsim13G0036000 Rhododendron simsii HOM05D006747 ORTHO05D008384 6.7e-103 377.9 309 65.7
arahy.Tifrunner.gnm1.ann1.0525TE Arachis hypogaea HOM05D006747 ORTHO05D008384 1.5e-102 376.7 271 70.8
arahy.Tifrunner.gnm1.ann1.EQ4JVG Arachis hypogaea HOM05D006747 ORTHO05D008384 1.5e-102 376.7 271 70.8
CARHR111050 Cardamine hirsuta HOM05D006747 ORTHO05D008384 1.5e-102 376.7 250 72.8
Thhalv10002060m.g Eutrema salsugineum HOM05D006747 ORTHO05D008384 1.5e-102 376.7 279 68.8
SalBow4G0984 Salvia bowleyana HOM05D006747 ORTHO05D008384 3.3e-102 375.6 273 69.6
PSO063G2179 Papaver somniferum HOM05D006747 ORTHO05D008384 4.3e-102 375.2 276 69.9
Manes.12G033600 Manihot esculenta HOM05D006747 ORTHO05D008384 3.7e-101 372.1 227 81.5
BraA07t27816Z Brassica rapa HOM05D006747 ORTHO05D008384 4.8e-101 371.7 243 73.7
HanXRQChr09g0254271 Helianthus annuus HOM05D006747 ORTHO05D008384 5.3e-100 368.2 267 71.2
MBI07_g16913_MAGBIO Magnolia biondii HOM05D006747 ORTHO05D008384 5.3e-100 368.2 266 69.9
THA.LOC104804045 Tarenaya hassleriana HOM05D006747 ORTHO05D008384 1.2e-99 367.1 275 69.1
BcaC06g36739 Brassica carinata HOM05D006747 ORTHO05D008384 1.5e-99 366.7 243 72.4
Medtr1g069790 Medicago truncatula HOM05D006747 ORTHO05D008384 2.0e-99 366.3 271 67.5
vmacro02672 Vaccinium macrocarpon HOM05D006747 ORTHO05D008384 4.5e-99 365.2 313 63.3
Aqoxy2G03665 Aquilegia oxysepala HOM05D006747 ORTHO05D008384 1.7e-98 363.2 280 69.3
BcaB03g16845 Brassica carinata HOM05D006747 ORTHO05D008384 2.9e-98 362.5 244 72.1
C07p00520 Brassica napus HOM05D006747 ORTHO05D008384 2.9e-98 362.5 242 72.3
BolC7t40498H Brassica oleracea HOM05D006747 ORTHO05D008384 3.8e-98 362.1 244 72.1
Aa31LG8G17440 Aethionema arabicum HOM05D006747 ORTHO05D008384 5.0e-98 361.7 259 69.1
MSTRG.21486 Avicennia marina HOM05D006747 ORTHO05D008384 1.1e-97 360.5 241 75.9
ATR0736G001 Amborella trichopoda HOM05D006747 ORTHO05D008384 1.4e-97 360.1 266 66.9
DCAR_012556 Daucus carota HOM05D006747 ORTHO05D008384 1.9e-97 359.8 272 68.0
EL10As5g23483 Beta vulgaris HOM05D006747 ORTHO05D008384 7.9e-96 354.4 247 69.6
CsaV3_7G027040 Cucumis sativus L. HOM05D006747 ORTHO05D008384 7.9e-96 354.4 237 71.7
CDE06G1525 Ceratophyllum demersum HOM05D006747 ORTHO05D008384 1.1e-94 350.5 261 69.0
Prupe.8G221800 Prunus persica HOM05D006747 ORTHO05D008384 1.9e-94 349.7 272 70.2
MELO3C012750.2 Cucumis melo HOM05D006747 ORTHO05D008384 2.5e-94 349.4 237 70.5
FAN24G2059 Fragaria x ananassa HOM05D006747 ORTHO05D008384 2.5e-94 349.4 268 72.0
PGR031G3840 Punica granatum HOM05D006747 ORTHO05D008384 3.3e-94 349.0 222 77.0
AUR62011854 Chenopodium quinoa HOM05D006747 ORTHO05D008384 7.4e-94 347.8 271 64.9
SGA_v2.0_scaffold138G35213 Striga asiatica HOM05D006747 ORTHO05D008384 7.4e-94 347.8 285 64.6
Os07g0458800 Oryza sativa ssp. japonica HOM05D006747 ORTHO05D008384 1.8e-92 343.2 260 65.4
Lj1C68G8 Lonicera japonica HOM05D003718 ORTHO05D004402 1.5e-91 340.1 213 78.9
Sc17g0000600 Simmondsia chinensis HOM05D006747 ORTHO05D008384 2.2e-90 336.3 212 77.4
unitig_8.g3882 Utricularia gibba HOM05D006747 ORTHO05D008384 3.9e-87 325.5 265 64.5
Nn1g02801 Nelumbo nucifera HOM05D006747 ORTHO05D008384 1.5e-86 323.6 265 65.3
Zm00001eb384950 Zea mays HOM05D006747 ORTHO05D008384 2.6e-86 322.8 265 61.9
AUR62024699 Chenopodium quinoa HOM05D006747 ORTHO05D008384 9.7e-86 320.9 212 70.8
CAN.G941.16 Capsicum annuum HOM05D006747 ORTHO05D008384 2.2e-85 319.7 210 74.8
A07p00240 Brassica napus HOM05D006747 ORTHO05D008384 4.8e-85 318.5 243 66.7
Hma1.2p1_0273F.1_g109550 Hydrangea macrophylla HOM05D006747 ORTHO05D008384 1.4e-81 307.0 189 80.4
HPP92_014756 Vanilla planifolia HOM05D006747 ORTHO05D008384 4.2e-81 305.4 213 69.5
PSO017G5775 Papaver somniferum HOM05D006747 ORTHO05D008384 9.7e-78 294.3 276 59.4
ECA248G1486 Erigeron canadensis HOM05D006747 ORTHO05D008384 1.4e-76 290.4 255 60.4
ClCG09G008030 Citrullus lanatus HOM05D006747 ORTHO05D008384 7.0e-76 288.1 415 41.9
Oeu035736.1 Olea europaea HOM05D006747 ORTHO05D008384 1.2e-72 277.3 176 75.6
QL09p039580 Quercus lobata HOM05D006747 ORTHO05D008384 1.2e-70 270.8 185 77.8
AagrBONN_evm.TU.Sc2ySwM_228.388 Anthoceros agrestis HOM05D006747 ORTHO05D008384 4.4e-70 268.9 258 53.9
Nitab4.5_0005593g0070 Nicotiana tabacum HOM05D006747 ORTHO05D008384 2.2e-69 266.5 212 64.6
Pp3c11_10320 Physcomitrium patens HOM05D006747 ORTHO05D008384 1.9e-65 253.4 240 51.7
Mapoly0024s0028 Marchantia polymorpha HOM05D006747 ORTHO05D008384 7.2e-65 251.5 253 52.6
Nitab4.5_0000326g0130 Nicotiana tabacum HOM05D006747 ORTHO05D008384 1.2e-64 250.8 242 58.7
HPP92_028089 Vanilla planifolia HOM05D006747 ORTHO05D008384 4.7e-64 248.8 201 64.2
Sed0026822 Sechium edule HOM05D006747 ORTHO05D008384 6.1e-56 221.9 187 63.6
SMO115G0001 Selaginella moellendorffii HOM05D006747 ORTHO05D008384 8.0e-56 221.5 229 49.3
Ca_09674_v3 Cicer arietinum L. HOM05D006747 ORTHO05D008384 1.4e-52 210.7 174 64.9
FvH4_2g21270 Fragaria vesca HOM05D006747 ORTHO05D008384 2.7e-51 206.5 154 74.0
QL09p039572 Quercus lobata HOM05D006747 ORTHO05D008384 2.1e-40 170.2 90 91.1
SEGI_35883 Sequoiadendron giganteum HOM05D006747 ORTHO05D008384 1.9e-28 130.6 89 68.5
CAN.G507.4 Capsicum annuum HOM05D006747 ORTHO05D008384 4.0e-23 112.8 73 68.5
Hma1.2p1_0273F.1_g109560 Hydrangea macrophylla HOM05D006747 ORTHO05D008384 1.5e-22 110.9 73 74.0
Cpa.g.sc165.14 Carica papaya HOM05D006747 ORTHO05D008384 2.9e-21 106.7 81 76.5
arahy.Tifrunner.gnm1.ann1.K1LLW7 Arachis hypogaea HOM05D006747 ORTHO05D008384 1.4e-20 104.4 58 86.2
SEGI_30594 Sequoiadendron giganteum HOM05D006747 ORTHO05D008384 2.4e-20 103.6 96 50.0
MD10G1182200 Malus domestica HOM05D006747 ORTHO05D008384 7.3e-17 92.0 70 67.1
Actinidia34415 Actinidia chinensis HOM05D006747 ORTHO05D008384 8.1e-16 88.6 56 69.6
Gohir.A07G213740 Gossypium hirsutum HOM05D006747 ORTHO05D008384 9.0e-15 85.1 153 37.9
Actinidia34401 Actinidia chinensis HOM05D006747 ORTHO05D008384 2.6e-14 83.6 54 68.5
SEGI_37670 Sequoiadendron giganteum HOM05D006747 ORTHO05D008384 2.4e-12 77.0 80 56.2
Duzib133G0415 Durio zibethinus HOM05D006747 ORTHO05D008384 3.5e-11 73.2 49 67.3
Gohir.A07G149550 Gossypium hirsutum HOM05D006747 ORTHO05D008384 1.3e-08 64.7 86 46.5
Cre07.g348951 Chlamydomonas reinhardtii HOM05D006747 ORTHO05D008384 1.2e-06 58.2 101 28.7
Actinidia07304 Actinidia chinensis HOM05D006747 ORTHO05D008384 4.5e-06 56.2 43 72.1
Actinidia23032 Actinidia chinensis HOM05D004842 ORTHO05D008384 4.5e-06 56.2 40 62.5


User provided reference genes

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