Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa002424 Carpinus fangiana HOM05D008367 ORTHO05D010529 1.3e-94 349.7 174 100.0
Haze_24631 Corylus avellana HOM05D008367 ORTHO05D010529 2.6e-84 315.5 174 92.0
QL09p038772 Quercus lobata HOM05D008367 ORTHO05D010529 1.2e-41 173.7 188 58.0
CiPaw.03G264200 Carya illinoinensis HOM05D008367 ORTHO05D010529 1.6e-41 173.3 192 57.3
MD05G1197200 Malus domestica HOM05D008367 ORTHO05D010529 1.1e-29 134.0 191 47.6
Ciclev10022407m.g Citrus clementina HOM05D008367 ORTHO05D010529 3.1e-29 132.5 190 45.3
Duzib133G0413 Durio zibethinus HOM05D008367 ORTHO05D010529 4.1e-29 132.1 191 44.5
Duzib138G1787 Durio zibethinus HOM05D008367 ORTHO05D010529 2.0e-28 129.8 196 44.4
Potri.002G038400 Populus trichocarpa HOM05D008367 ORTHO05D010529 4.5e-28 128.6 193 45.1
RcHm_v2.0_Chr6g0288121 Rosa chinensis HOM05D008367 ORTHO05D010529 5.0e-27 125.2 193 43.5
Potri.005G224200 Populus trichocarpa HOM05D008367 ORTHO05D010529 8.6e-27 124.4 196 42.9
FAN27G3501 Fragaria x ananassa HOM05D004208 ORTHO05D005156 1.2e-25 120.6 197 41.6
Medtr7g096950 Medicago truncatula HOM05D008367 ORTHO05D010529 1.2e-25 120.6 195 41.5
Lj1g0003464 Lotus japonicus HOM05D008367 ORTHO05D010529 2.1e-25 119.8 200 42.0
Sabra05G0173000 Salix brachista HOM05D008367 ORTHO05D010529 3.6e-25 119.0 194 42.8
Manes.13G034100 Manihot esculenta HOM05D008367 ORTHO05D010529 8.0e-25 117.9 194 43.8
Sabra02G0030800 Salix brachista HOM05D008367 ORTHO05D010529 8.0e-25 117.9 191 41.9
Thecc.01G258200 Theobroma cacao HOM05D008367 ORTHO05D010529 1.8e-24 116.7 193 42.0
Cc01_g18350 Coffea canephora HOM05D008367 ORTHO05D010529 2.3e-24 116.3 212 38.7
Prupe.8G223700 Prunus persica HOM05D008367 ORTHO05D010529 3.0e-24 115.9 188 44.7
Ca_08676_v3 Cicer arietinum L. HOM05D008367 ORTHO05D010529 6.8e-24 114.8 185 42.2
COL.COLO4_05894 Corchorus olitorius HOM05D008367 ORTHO05D010529 8.9e-24 114.4 192 42.2
Gohir.D07G155080 Gossypium hirsutum HOM05D008367 ORTHO05D010529 1.2e-23 114.0 183 42.6
Gorai.001G177400 Gossypium raimondii HOM05D008367 ORTHO05D010529 1.2e-23 114.0 183 42.6
FAN20G2986 Fragaria x ananassa HOM05D004208 ORTHO05D005156 2.6e-23 112.8 192 40.1
FvH4_2g21490 Fragaria vesca HOM05D008367 ORTHO05D010529 7.5e-23 111.3 195 40.5
Phvul.001G161100 Phaseolus vulgaris HOM05D008367 ORTHO05D010529 9.8e-23 110.9 173 46.2
Gohir.A07G148700 Gossypium hirsutum HOM05D008367 ORTHO05D010529 1.3e-22 110.5 179 41.9
Rhsim01G0263900 Rhododendron simsii HOM05D008367 ORTHO05D010529 2.2e-22 109.8 205 41.0
Glyma.03G163200 Glycine max HOM05D008367 ORTHO05D010529 2.8e-22 109.4 178 44.9
Actinidia25788 Actinidia chinensis HOM05D008367 ORTHO05D010529 4.9e-22 108.6 183 41.0
Ca_08710_v3 Cicer arietinum L. HOM05D008367 ORTHO05D010529 4.9e-22 108.6 185 41.6
Glyma.19G164700 Glycine max HOM05D008367 ORTHO05D010529 6.3e-22 108.2 175 44.6
Cpa.g.sc165.10 Carica papaya HOM05D008367 ORTHO05D010529 1.1e-21 107.5 186 44.1
Hma1.2p1_0273F.1_g109700 Hydrangea macrophylla HOM05D008367 ORTHO05D010529 1.1e-21 107.5 182 40.7
Rhsim13G0035000 Rhododendron simsii HOM05D008367 ORTHO05D010529 1.8e-21 106.7 189 40.2
Ca_08702_v3 Cicer arietinum L. HOM05D008367 ORTHO05D010529 2.4e-21 106.3 179 41.9
Atru.chr5.1688 Acer truncatum HOM05D008367 ORTHO05D010529 2.0e-20 103.2 170 42.4
Actinidia09550 Actinidia chinensis HOM05D008367 ORTHO05D010529 3.5e-20 102.4 189 41.8
Psat3g056920 Pisum sativum HOM05D008367 ORTHO05D010529 3.5e-20 102.4 190 37.9
VMungo1383G3617 Vigna mungo HOM05D008367 ORTHO05D010529 3.5e-20 102.4 172 43.6
FAN24G2300 Fragaria x ananassa HOM05D004208 ORTHO05D005156 1.3e-19 100.5 191 38.7
CANSAT01G1417 Cannabis sativa HOM05D008367 ORTHO05D010529 2.3e-19 99.8 187 38.0
Hma1.2p1_0576F.1_g182070 Hydrangea macrophylla HOM05D008367 ORTHO05D010529 1.5e-18 97.1 192 39.6
Eucgr.B01554 Eucalyptus grandis HOM05D008367 ORTHO05D010529 5.6e-18 95.1 178 37.6
Oeu025845.1 Olea europaea HOM05D008367 ORTHO05D010529 6.8e-16 88.2 191 36.6
TAR365G0977 Trochodendron aralioides HOM05D007526 ORTHO05D009350 2.0e-15 86.7 188 37.8
Lsat_1_v5_gn_8_93101 Lactuca sativa HOM05D008367 ORTHO05D010529 5.8e-15 85.1 163 41.7
Actinidia27694 Actinidia chinensis HOM05D008367 ORTHO05D010529 7.5e-15 84.7 187 36.4
CAN.G896.7 Capsicum annuum HOM05D008367 ORTHO05D010529 7.5e-15 84.7 197 37.6
THA.LOC104814518 Tarenaya hassleriana HOM05D013395 ORTHO05D015261 7.5e-15 84.7 170 41.2
Lalb_Chr01g0012251 Lupinus albus HOM05D008367 ORTHO05D010529 9.8e-15 84.3 187 34.8
Nitab4.5_0000470g0140 Nicotiana tabacum HOM05D008367 ORTHO05D010529 2.2e-14 83.2 200 33.5
Cpa.g.sc44.57 Carica papaya HOM05D007526 ORTHO05D009350 4.1e-13 79.0 188 34.6
Atru.chr4.2058 Acer truncatum HOM05D007526 ORTHO05D009350 9.2e-13 77.8 185 35.1
Migut.N02203 Erythranthe guttata HOM05D008367 ORTHO05D010529 1.2e-12 77.4 207 37.7
Nn3g19655 Nelumbo nucifera HOM05D007526 ORTHO05D009350 2.0e-12 76.6 234 34.2
ECA236G2746 Erigeron canadensis HOM05D008367 ORTHO05D010529 4.6e-12 75.5 183 33.9
PGSC0003DMG400010298 Solanum tuberosum HOM05D008367 ORTHO05D010529 6.0e-12 75.1 176 35.8
Nn1g02762 Nelumbo nucifera HOM05D007526 ORTHO05D009350 1.3e-11 73.9 233 31.8
Sopen09g028370 Solanum pennellii HOM05D008367 ORTHO05D010529 1.3e-11 73.9 178 37.1
Eucgr.H03043 Eucalyptus grandis HOM05D007526 ORTHO05D009350 3.9e-11 72.4 177 29.9
TAR636G0759 Trochodendron aralioides HOM05D007526 ORTHO05D009350 3.9e-11 72.4 191 34.6
QL06p017957 Quercus lobata HOM05D007526 ORTHO05D009350 5.0e-11 72.0 178 33.1
Thecc.04G255400 Theobroma cacao HOM05D007526 ORTHO05D009350 6.6e-11 71.6 197 29.9
Glyma.10G181000 Glycine max HOM05D007526 ORTHO05D009350 1.5e-10 70.5 189 32.8
Haze_11381 Corylus avellana HOM05D007526 ORTHO05D009350 2.5e-10 69.7 174 31.6
MD13G1214200 Malus domestica HOM05D007526 ORTHO05D009350 3.3e-10 69.3 202 32.2
Aa31LG8G17450 Aethionema arabicum HOM05D013395 ORTHO05D015261 4.3e-10 68.9 170 37.1
Dinv22407 Davidia involucrata HOM05D008367 ORTHO05D010529 4.3e-10 68.9 112 38.4
Gorai.007G146300 Gossypium raimondii HOM05D008367 ORTHO05D010529 4.3e-10 68.9 175 37.1
Cfa022958 Carpinus fangiana HOM05D007526 ORTHO05D009350 5.6e-10 68.6 176 34.1
Ciclev10005975m.g Citrus clementina HOM05D007526 ORTHO05D009350 5.6e-10 68.6 183 31.7
Cc03_g05540 Coffea canephora HOM05D007526 ORTHO05D009350 5.6e-10 68.6 187 31.6
Gohir.D11G136600 Gossypium hirsutum HOM05D008367 ORTHO05D010529 5.6e-10 68.6 175 36.0
Aqoxy5G00249 Aquilegia oxysepala HOM05D007526 ORTHO05D009350 7.3e-10 68.2 199 32.2
DCAR_007739 Daucus carota HOM05D008367 ORTHO05D010529 7.3e-10 68.2 101 41.6
Prupe.1G039600 Prunus persica HOM05D007526 ORTHO05D009350 1.2e-09 67.4 204 30.9
Rhsim13G0034900 Rhododendron simsii HOM05D009321 ORTHO05D010529 1.2e-09 67.4 40 77.5
Duzib151G1045 Durio zibethinus HOM05D007526 ORTHO05D009350 2.1e-09 66.6 208 30.8
Glyma.20G209500 Glycine max HOM05D007526 ORTHO05D009350 2.1e-09 66.6 183 32.8
MBI07_g16245_MAGBIO Magnolia biondii HOM05D007526 ORTHO05D009350 2.1e-09 66.6 192 34.4
MD16G1219200 Malus domestica HOM05D007526 ORTHO05D009350 2.8e-09 66.2 204 29.9
VMungo0720G1630 Vigna mungo HOM05D007526 ORTHO05D009350 2.8e-09 66.2 189 31.7
CiPaw.01G184600 Carya illinoinensis HOM05D007526 ORTHO05D009350 6.2e-09 65.1 180 31.7
SGA_v2.0_scaffold80G25773 Striga asiatica HOM05D008367 ORTHO05D010529 8.0e-09 64.7 194 32.5
CSS0033898 Camellia sinensis var. sinensis HOM05D007526 ORTHO05D009350 2.3e-08 63.2 164 30.5
MELO3C006420.2 Cucumis melo HOM05D007526 ORTHO05D009350 5.2e-08 62.0 181 29.3
Glyma.20G209600 Glycine max HOM05D007526 ORTHO05D009350 5.2e-08 62.0 163 28.8
RcHm_v2.0_Chr4g0393211 Rosa chinensis HOM05D007526 ORTHO05D009350 5.2e-08 62.0 177 29.9
CsaV3_3G012050 Cucumis sativus L. HOM05D007526 ORTHO05D009350 6.8e-08 61.6 181 30.4
Lj6g0011756 Lotus japonicus HOM05D007526 ORTHO05D009350 6.8e-08 61.6 180 29.4
Sabra08G0127400 Salix brachista HOM05D007526 ORTHO05D009350 6.8e-08 61.6 182 32.4
Duzib212G0007 Durio zibethinus HOM05D007526 ORTHO05D009350 1.2e-07 60.8 200 31.5
Phvul.007G108400 Phaseolus vulgaris HOM05D007526 ORTHO05D009350 1.5e-07 60.5 186 28.5
Gohir.A09G229800 Gossypium hirsutum HOM05D007526 ORTHO05D009350 2.0e-07 60.1 196 28.1
PGR004G2347 Punica granatum HOM05D007526 ORTHO05D009350 2.0e-07 60.1 184 28.8
Gorai.006G253500 Gossypium raimondii HOM05D007526 ORTHO05D009350 2.6e-07 59.7 189 28.0
Potri.008G167200 Populus trichocarpa HOM05D007526 ORTHO05D009350 3.4e-07 59.3 188 30.3
FvH4_4g03670 Fragaria vesca HOM05D007526 ORTHO05D009350 4.4e-07 58.9 178 29.8
Rhsim04G0182300 Rhododendron simsii HOM05D007526 ORTHO05D009350 4.4e-07 58.9 168 31.5
TWI09G0237 Tripterygium wilfordii HOM05D007526 ORTHO05D009350 4.4e-07 58.9 173 26.6
PGSC0003DMG400017266 Solanum tuberosum HOM05D007526 ORTHO05D009350 5.8e-07 58.5 226 26.5
FAN12G2381 Fragaria x ananassa HOM05D007526 ORTHO05D009350 7.5e-07 58.2 177 29.4
FAN17G0331 Fragaria x ananassa HOM05D007526 ORTHO05D009350 7.5e-07 58.2 177 27.7
CSS0016058 Camellia sinensis var. sinensis HOM05D007526 ORTHO05D009350 9.8e-07 57.8 166 31.3
AL3G53510 Arabidopsis lyrata HOM05D013395 ORTHO05D015261 2.2e-06 56.6 164 32.3
Medtr1g042820 Medicago truncatula HOM05D007526 ORTHO05D009350 2.2e-06 56.6 177 25.4
DCAR_027319 Daucus carota HOM05D007526 ORTHO05D009350 8.3e-06 54.7 200 29.0


User provided reference genes

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