Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa002385 Carpinus fangiana HOM05D013698 ORTHO05D008195 2.0e-46 188.7 94 100.0
Atru.chr5.1627 Acer truncatum HOM05D013698 ORTHO05D008195 7.4e-17 90.5 82 56.1
Thecc.01G263500 Theobroma cacao HOM05D013698 ORTHO05D008195 9.7e-17 90.1 85 55.3
TWI12G0012 Tripterygium wilfordii HOM05D007967 ORTHO05D008195 4.8e-16 87.8 86 54.7
Gohir.A07G210600 Gossypium hirsutum HOM05D013698 ORTHO05D008195 1.3e-13 79.7 86 48.8
Gohir.A07G210700 Gossypium hirsutum HOM05D013698 ORTHO05D008195 1.7e-13 79.3 93 47.3
TAR636G0109 Trochodendron aralioides HOM05D007967 ORTHO05D008195 1.9e-12 75.9 103 46.6
Gohir.D07G216700 Gossypium hirsutum HOM05D013698 ORTHO05D008195 1.2e-11 73.2 93 43.0
TAR362G0007 Trochodendron aralioides HOM05D007967 ORTHO05D008195 4.6e-11 71.2 100 45.0
CiPaw.01G189400 Carya illinoinensis HOM05D007967 ORTHO05D008195 1.0e-10 70.1 87 43.7
Gohir.A07G210550 Gossypium hirsutum HOM05D013698 ORTHO05D008195 1.0e-10 70.1 86 46.5
Gohir.D08G070033 Gossypium hirsutum HOM05D013698 ORTHO05D008195 1.0e-10 70.1 83 47.0
Potri.010G075100 Populus trichocarpa HOM05D007967 ORTHO05D008195 1.0e-10 70.1 92 46.7
Gorai.004G073700 Gossypium raimondii HOM05D013698 ORTHO05D008195 1.8e-10 69.3 83 45.8
Gohir.A08G060833 Gossypium hirsutum HOM05D013698 ORTHO05D008195 2.3e-10 68.9 83 45.8
TAR406G0009 Trochodendron aralioides HOM05D007967 ORTHO05D008195 6.7e-10 67.4 88 46.6
Nn3g19573 Nelumbo nucifera HOM05D007967 ORTHO05D008195 2.0e-09 65.9 105 42.9
Cfa008369 Carpinus fangiana HOM05D007967 ORTHO05D008195 4.3e-09 64.7 102 41.2
Manes.05G086832 Manihot esculenta HOM05D056509 ORTHO05D008195 5.7e-09 64.3 100 44.0
Migut.N02191 Erythranthe guttata HOM05D012324 ORTHO05D008195 7.4e-09 63.9 107 40.2
Oeu025817.1 Olea europaea HOM05D012324 ORTHO05D008195 7.4e-09 63.9 87 42.5
Aqoxy5G00298 Aquilegia oxysepala HOM05D007967 ORTHO05D008195 9.7e-09 63.5 92 40.2
Manes.03G168300 Manihot esculenta HOM05D007967 ORTHO05D008195 9.7e-09 63.5 96 38.5
Gohir.A02G036500 Gossypium hirsutum HOM05D007967 ORTHO05D008195 2.2e-08 62.4 100 43.0
COL.COLO4_05588 Corchorus olitorius HOM05D013698 ORTHO05D008195 4.8e-08 61.2 74 50.0
Oeu058813.1 Olea europaea HOM05D012324 ORTHO05D008195 1.1e-07 60.1 88 39.8
Manes.15G037400 Manihot esculenta HOM05D007967 ORTHO05D008195 1.4e-07 59.7 101 35.6
Potri.008G163200 Populus trichocarpa HOM05D007967 ORTHO05D008195 1.4e-07 59.7 92 38.0
Cfa002384 Carpinus fangiana HOM05D015033 ORTHO05D017805 2.4e-07 58.9 81 46.9
Cfa008371 Carpinus fangiana HOM05D007967 ORTHO05D008195 2.4e-07 58.9 89 41.6
Haze_24581 Corylus avellana HOM05D015033 ORTHO05D017805 2.4e-07 58.9 81 45.7
CiPaw.04G058700 Carya illinoinensis HOM05D015033 ORTHO05D017805 5.3e-07 57.8 83 48.2
FAN22G1743 Fragaria x ananassa HOM05D007967 ORTHO05D008195 5.3e-07 57.8 106 34.9
TAR636G2334 Trochodendron aralioides HOM05D007967 ORTHO05D008195 5.3e-07 57.8 78 41.0
Dinv05722 Davidia involucrata HOM05D003159 ORTHO05D003780 6.9e-07 57.4 68 47.1
COL.COLO4_15804 Corchorus olitorius HOM05D007967 ORTHO05D008195 1.2e-06 56.6 101 39.6
Migut.G00444 Erythranthe guttata HOM05D007967 ORTHO05D008195 1.2e-06 56.6 89 42.7
TPR.G28758 Trifolium pratense HOM05D007967 ORTHO05D008195 1.2e-06 56.6 76 43.4
Cfa002383 Carpinus fangiana HOM05D015033 ORTHO05D017805 1.5e-06 56.2 82 48.8
CiPaw.04G184300 Carya illinoinensis HOM05D015033 ORTHO05D017805 1.5e-06 56.2 82 47.6
Cfa002381 Carpinus fangiana HOM05D015033 ORTHO05D017805 2.0e-06 55.8 82 46.3
Cfa008368 Carpinus fangiana HOM05D007967 ORTHO05D008195 2.6e-06 55.5 68 42.6
Manes.01G199601 Manihot esculenta HOM05D056509 ORTHO05D008195 2.6e-06 55.5 95 41.1
Lj6g0026326 Lotus japonicus HOM05D007967 ORTHO05D008195 3.4e-06 55.1 66 43.9
PGSC0003DMG400016351 Solanum tuberosum HOM05D007967 ORTHO05D008195 3.4e-06 55.1 85 40.0
CiPaw.03G260800 Carya illinoinensis HOM05D007517 ORTHO05D006922 7.7e-06 53.9 68 48.5
FAN17G2965 Fragaria x ananassa HOM05D007967 ORTHO05D008195 7.7e-06 53.9 103 34.0
Oeu025806.1 Olea europaea HOM05D012324 ORTHO05D008195 7.7e-06 53.9 95 37.9


User provided reference genes

Program Settings