Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa002378 Carpinus fangiana HOM05D007517 ORTHO05D006922 4.8e-35 150.6 75 100.0
Haze_24578 Corylus avellana HOM05D007517 ORTHO05D006922 3.6e-30 134.4 76 90.8
QL10p016305 Quercus lobata HOM05D007517 ORTHO05D006922 3.7e-19 97.8 74 71.6
QL10p016371 Quercus lobata HOM05D007517 ORTHO05D006922 7.7e-17 90.1 74 64.9
QL10p016395 Quercus lobata HOM05D007517 ORTHO05D006922 1.0e-16 89.7 74 63.5
QL10p016326 Quercus lobata HOM05D007517 ORTHO05D006922 1.3e-16 89.4 74 62.2
Thecc.01G263600 Theobroma cacao HOM05D007517 ORTHO05D006922 2.3e-13 78.6 73 53.4
Gorai.004G073800 Gossypium raimondii HOM05D007517 ORTHO05D006922 3.0e-13 78.2 61 62.3
Gohir.D08G070066 Gossypium hirsutum HOM05D007517 ORTHO05D006922 8.8e-13 76.6 61 62.3
Gohir.A08G060866 Gossypium hirsutum HOM05D007517 ORTHO05D006922 2.0e-12 75.5 68 55.9
Aqoxy5G00299 Aquilegia oxysepala HOM05D007517 ORTHO05D006922 1.3e-11 72.8 62 54.8
Duzib133G0625 Durio zibethinus HOM05D007517 ORTHO05D006922 1.3e-11 72.8 61 57.4
Rhsim05G0176100 Rhododendron simsii HOM05D007517 ORTHO05D006922 1.3e-11 72.8 70 52.9
TWI12G0979 Tripterygium wilfordii HOM05D007517 ORTHO05D006922 2.8e-11 71.6 74 55.4
Rhsim05G0177900 Rhododendron simsii HOM05D007517 ORTHO05D006922 3.7e-11 71.2 70 52.9
Gohir.A11G128700 Gossypium hirsutum HOM05D007517 ORTHO05D006922 3.1e-10 68.2 73 49.3
Atru.chr5.1625 Acer truncatum HOM05D007517 ORTHO05D006922 4.1e-10 67.8 78 47.4
Gohir.D11G134500 Gossypium hirsutum HOM05D007517 ORTHO05D006922 4.1e-10 67.8 73 47.9
Gorai.007G143900 Gossypium raimondii HOM05D007517 ORTHO05D006922 4.1e-10 67.8 73 47.9
Sabra13G0040000 Salix brachista HOM05D007517 ORTHO05D006922 9.1e-10 66.6 67 52.2
Sabra13G0040100 Salix brachista HOM05D007517 ORTHO05D006922 9.1e-10 66.6 67 52.2
Sabra13G0040200 Salix brachista HOM05D007517 ORTHO05D006922 9.1e-10 66.6 67 52.2
Sabra13G0040300 Salix brachista HOM05D007517 ORTHO05D006922 9.1e-10 66.6 67 52.2
ClCG07G000800 Citrullus lanatus HOM05D007517 ORTHO05D006922 1.6e-09 65.9 77 49.4
QL10p016378 Quercus lobata HOM05D007517 ORTHO05D006922 1.6e-09 65.9 59 66.1
Cpa.g.sc162.5 Carica papaya HOM05D007517 ORTHO05D006922 2.0e-09 65.5 68 51.5
Potri.019G013000 Populus trichocarpa HOM05D007517 ORTHO05D006922 3.5e-09 64.7 73 47.9
Dinv30121 Davidia involucrata HOM05D007517 ORTHO05D006922 4.5e-09 64.3 46 71.7
Potri.005G221200 Populus trichocarpa HOM05D007517 ORTHO05D006922 4.5e-09 64.3 73 50.7
Sabra13G0039900 Salix brachista HOM05D007517 ORTHO05D006922 4.5e-09 64.3 67 52.2
Potri.002G041950 Populus trichocarpa HOM05D007517 ORTHO05D006922 1.0e-08 63.2 73 49.3
Potri.001G380300 Populus trichocarpa HOM05D007517 ORTHO05D006922 3.8e-08 61.2 73 47.9
Dinv05722 Davidia involucrata HOM05D003159 ORTHO05D003780 5.0e-08 60.8 46 71.7
Duzib138G0038 Durio zibethinus HOM05D007517 ORTHO05D006922 5.0e-08 60.8 73 45.2
Potri.013G043600 Populus trichocarpa HOM05D007517 ORTHO05D006922 5.0e-08 60.8 67 47.8
Prupe.8G228600 Prunus persica HOM05D010471 ORTHO05D019155 5.0e-08 60.8 63 47.6
Dinv44645 Davidia involucrata HOM05D007517 ORTHO05D006922 1.1e-07 59.7 66 50.0
QL10p016398 Quercus lobata HOM05D007517 ORTHO05D006922 1.5e-07 59.3 51 62.7
Potri.019G012400 Populus trichocarpa HOM05D007517 ORTHO05D006922 1.9e-07 58.9 71 45.1
Sed0011700 Sechium edule HOM05D007517 ORTHO05D006922 3.2e-07 58.2 71 42.3
Glyma.03G248900 Glycine max HOM05D007517 ORTHO05D006922 4.2e-07 57.8 74 45.9
Sabra08G0124500 Salix brachista HOM05D007517 ORTHO05D006922 4.2e-07 57.8 76 46.1
Sabra05G0170200 Salix brachista HOM05D007517 ORTHO05D006922 5.5e-07 57.4 55 58.2
Sed0018312 Sechium edule HOM05D007517 ORTHO05D006922 5.5e-07 57.4 71 42.3
PGSC0003DMG400000987 Solanum tuberosum HOM05D014319 ORTHO05D006922 7.2e-07 57.0 73 47.9
Atru.chr2.879 Acer truncatum HOM05D007517 ORTHO05D006922 9.4e-07 56.6 38 63.2
CAN.G1256.1 Capsicum annuum HOM05D014319 ORTHO05D006922 9.4e-07 56.6 71 47.9
Potri.019G012700 Populus trichocarpa HOM05D007517 ORTHO05D006922 9.4e-07 56.6 73 43.8
Atru.chr2.873 Acer truncatum HOM05D007517 ORTHO05D006922 2.1e-06 55.5 69 43.5
Phvul.006G103600 Phaseolus vulgaris HOM05D007517 ORTHO05D006922 2.1e-06 55.5 64 42.2
Sabra19G0017200 Salix brachista HOM05D007517 ORTHO05D006922 2.7e-06 55.1 73 39.7
Thecc.05G277600 Theobroma cacao HOM05D007517 ORTHO05D006922 2.7e-06 55.1 30 80.0
TAR636G0129 Trochodendron aralioides HOM05D007517 ORTHO05D006922 3.6e-06 54.7 65 47.7
COL.COLO4_15407 Corchorus olitorius HOM05D007517 ORTHO05D006922 4.7e-06 54.3 63 44.4
Glyma.10G164000 Glycine max HOM05D007517 ORTHO05D006922 4.7e-06 54.3 64 43.8
Glyma.19G246500 Glycine max HOM05D007517 ORTHO05D006922 4.7e-06 54.3 74 43.2
COL.COLO4_05587 Corchorus olitorius HOM05D007517 ORTHO05D006922 6.1e-06 53.9 45 53.3
Lalb_Chr21g0311071 Lupinus albus HOM05D007517 ORTHO05D006922 6.1e-06 53.9 63 46.0
Peaxi162Scf00519g00016 Petunia axillaris HOM05D014319 ORTHO05D006922 6.1e-06 53.9 46 65.2
Glyma.20G226400 Glycine max HOM05D007517 ORTHO05D006922 8.0e-06 53.5 64 45.3


User provided reference genes

Program Settings