Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa002318 Carpinus fangiana HOM05D005044 ORTHO05D006799 2.3e-228 795.4 462 100.0
Haze_24523 Corylus avellana HOM05D005044 ORTHO05D006799 6.1e-213 744.2 452 93.8
QL12p042617 Quercus lobata HOM05D005044 ORTHO05D006799 1.4e-198 696.4 461 84.2
Prupe.8G232900 Prunus persica HOM05D005044 ORTHO05D006799 4.2e-182 641.7 462 76.4
Cpa.g.sc52.102 Carica papaya HOM05D005044 ORTHO05D006799 2.1e-181 639.4 473 74.8
Glyma.03G158300 Glycine max HOM05D005044 ORTHO05D006799 8.0e-181 637.5 432 82.9
MD10G1193500 Malus domestica HOM05D005044 ORTHO05D006799 1.8e-180 636.3 462 75.8
RcHm_v2.0_Chr6g0289651 Rosa chinensis HOM05D005044 ORTHO05D006799 2.3e-180 636.0 462 78.4
FAN15G1010 Fragaria x ananassa HOM05D005044 ORTHO05D006799 2.2e-178 629.4 464 77.8
Gohir.D11G132200 Gossypium hirsutum HOM05D005044 ORTHO05D006799 3.7e-178 628.6 464 82.1
FvH4_2g22590 Fragaria vesca HOM05D005044 ORTHO05D006799 8.3e-178 627.5 464 77.4
FAN24G0661 Fragaria x ananassa HOM05D005044 ORTHO05D006799 8.3e-178 627.5 464 77.4
Gorai.007G141400 Gossypium raimondii HOM05D005044 ORTHO05D006799 8.3e-178 627.5 464 82.1
FAN20G1248 Fragaria x ananassa HOM05D005044 ORTHO05D006799 7.0e-177 624.4 464 77.4
Dinv22487 Davidia involucrata HOM05D005044 ORTHO05D006799 9.1e-177 624.0 463 75.2
Glyma.19G160700 Glycine max HOM05D005044 ORTHO05D006799 9.1e-177 624.0 462 77.3
Thecc.01G268500 Theobroma cacao HOM05D005044 ORTHO05D006799 9.1e-177 624.0 465 83.2
Lj1g0021498 Lotus japonicus HOM05D005044 ORTHO05D006799 1.2e-176 623.6 468 72.2
Gohir.A11G127000 Gossypium hirsutum HOM05D005044 ORTHO05D006799 2.0e-176 622.9 464 81.5
Ciclev10019527m.g Citrus clementina HOM05D005044 ORTHO05D006799 2.7e-176 622.5 471 74.7
VMungo1383G1961 Vigna mungo HOM05D005044 ORTHO05D006799 2.7e-176 622.5 459 76.3
Phvul.001G156000 Phaseolus vulgaris HOM05D005044 ORTHO05D006799 3.5e-176 622.1 457 77.0
Potri.002G045900 Populus trichocarpa HOM05D005044 ORTHO05D006799 7.7e-176 620.9 467 74.5
FAN27G2477 Fragaria x ananassa HOM05D005044 ORTHO05D006799 1.7e-175 619.8 466 76.6
Potri.005G217400 Populus trichocarpa HOM05D005044 ORTHO05D006799 1.7e-175 619.8 470 71.1
Psat3g061080 Pisum sativum HOM05D005044 ORTHO05D006799 5.5e-174 614.8 464 78.0
CSS0043243 Camellia sinensis var. sinensis HOM05D005044 ORTHO05D006799 2.1e-173 612.8 464 76.3
Dinv34561 Davidia involucrata HOM05D005044 ORTHO05D006799 3.6e-173 612.1 459 75.2
Atru.chr5.1554 Acer truncatum HOM05D005044 ORTHO05D006799 4.7e-173 611.7 469 70.6
Lj1A57T46 Lonicera japonica HOM05D005044 ORTHO05D006799 1.0e-172 610.5 467 73.9
THA.LOC104804692 Tarenaya hassleriana HOM05D005044 ORTHO05D006799 2.3e-172 609.4 476 71.0
CiPaw.04G181200 Carya illinoinensis HOM05D005044 ORTHO05D006799 3.0e-172 609.0 339 89.4
COL.COLO4_06089 Corchorus olitorius HOM05D005044 ORTHO05D006799 3.0e-172 609.0 464 82.3
MELO3C007015.2 Cucumis melo HOM05D005044 ORTHO05D006799 7.5e-171 604.4 467 73.4
Migut.N02179 Erythranthe guttata HOM05D005044 ORTHO05D006799 3.7e-170 602.1 463 70.6
Manes.05G083800 Manihot esculenta HOM05D005044 ORTHO05D006799 3.7e-170 602.1 473 74.0
Ca_08641_v3 Cicer arietinum L. HOM05D005044 ORTHO05D006799 4.9e-170 601.7 458 76.9
CsaV3_6G052930 Cucumis sativus L. HOM05D005044 ORTHO05D006799 1.1e-169 600.5 467 73.2
TPR.G19106 Trifolium pratense HOM05D005044 ORTHO05D006799 1.1e-169 600.5 462 73.2
Duzib133G0403 Durio zibethinus HOM05D005044 ORTHO05D006799 1.8e-169 599.7 473 75.3
MSTRG.17471 Avicennia marina HOM05D005044 ORTHO05D006799 2.4e-169 599.4 464 70.7
TAR365G0173 Trochodendron aralioides HOM05D005044 ORTHO05D006799 4.1e-169 598.6 465 73.1
HanXRQChr10g0281481 Helianthus annuus HOM05D005044 ORTHO05D006799 5.4e-169 598.2 466 72.3
Lalb_Chr25g0290121 Lupinus albus HOM05D005044 ORTHO05D006799 2.7e-168 595.9 466 71.0
Solyc10g045390.2 Solanum lycopersicum HOM05D005044 ORTHO05D006799 2.7e-168 595.9 458 72.1
Sopen10g015430 Solanum pennellii HOM05D005044 ORTHO05D006799 5.9e-168 594.7 458 71.8
TWI12G0479 Tripterygium wilfordii HOM05D005044 ORTHO05D006799 8.6e-167 590.9 486 70.8
AT3G54610 Arabidopsis thaliana HOM05D005044 ORTHO05D006799 1.1e-166 590.5 473 70.0
MBI04_g08415_MAGBIO Magnolia biondii HOM05D005044 ORTHO05D006799 1.5e-166 590.1 470 70.9
Nn1g02531 Nelumbo nucifera HOM05D005044 ORTHO05D006799 3.3e-166 589.0 466 70.2
Medtr7g096040 Medicago truncatula HOM05D005044 ORTHO05D006799 4.3e-166 588.6 459 75.8
Carub.0005s2121 Capsella rubella HOM05D005044 ORTHO05D006799 2.8e-165 585.9 473 70.6
Lsat_1_v5_gn_9_8160 Lactuca sativa HOM05D005044 ORTHO05D006799 1.0e-164 583.9 439 74.7
Sc05g0001060 Simmondsia chinensis HOM05D005044 ORTHO05D006799 1.0e-164 583.9 461 70.5
Actinidia24932 Actinidia chinensis HOM05D005044 ORTHO05D006799 1.8e-164 583.2 463 70.4
TWI75G1122 Tripterygium wilfordii HOM05D005044 ORTHO05D006799 4.0e-164 582.0 473 71.2
PGR044G0510 Punica granatum HOM05D005044 ORTHO05D006799 2.6e-163 579.3 471 73.0
AL5G35690 Arabidopsis lyrata HOM05D005044 ORTHO05D006799 7.5e-163 577.8 473 68.5
Thhalv10010247m.g Eutrema salsugineum HOM05D005044 ORTHO05D006799 4.9e-162 575.1 483 65.4
Sp5g07850 Schrenkiella parvula HOM05D005044 ORTHO05D006799 8.3e-162 574.3 473 66.2
SGA_v2.0_scaffold80G25918 Striga asiatica HOM05D005044 ORTHO05D006799 1.1e-161 573.9 491 67.0
ClCG01G025700 Citrullus lanatus HOM05D005044 ORTHO05D006799 1.8e-161 573.2 515 65.6
Aa31sc64G50 Aethionema arabicum HOM05D005044 ORTHO05D006799 4.6e-160 568.5 510 61.8
Eucgr.K03317 Eucalyptus grandis HOM05D005044 ORTHO05D006799 4.6e-160 568.5 436 72.2
Aqoxy2G03504 Aquilegia oxysepala HOM05D005044 ORTHO05D006799 7.8e-160 567.8 475 68.4
Sed0025057 Sechium edule HOM05D005044 ORTHO05D006799 8.6e-159 564.3 467 69.6
PSO832G0444 Papaver somniferum HOM05D005044 ORTHO05D006799 1.9e-158 563.1 467 69.8
Eucgr.K03316 Eucalyptus grandis HOM05D005044 ORTHO05D006799 4.3e-158 562.0 483 69.6
Lalb_Chr01g0019911 Lupinus albus HOM05D005044 ORTHO05D006799 6.2e-157 558.1 462 70.3
DCAR_018443 Daucus carota HOM05D005044 ORTHO05D006799 1.2e-155 553.9 458 67.0
Manes.01G202300 Manihot esculenta HOM05D005044 ORTHO05D006799 2.0e-155 553.1 431 79.4
PSO210G5903 Papaver somniferum HOM05D005044 ORTHO05D006799 3.2e-153 545.8 465 68.4
Rhsim13G0030500 Rhododendron simsii HOM05D005044 ORTHO05D006799 1.7e-151 540.0 487 67.6
vmacro02624 Vaccinium macrocarpon HOM05D005044 ORTHO05D006799 2.3e-151 539.7 338 80.8
Hund09563 Selenicereus undatus HOM05D005044 ORTHO05D006799 4.3e-150 535.4 435 73.6
ECA247G2181 Erigeron canadensis HOM05D005044 ORTHO05D006799 1.3e-146 523.9 466 67.0
PSO210G1356 Papaver somniferum HOM05D005044 ORTHO05D006799 6.4e-146 521.5 433 70.0
AUR62011952 Chenopodium quinoa HOM05D005044 ORTHO05D006799 1.9e-145 520.0 322 79.5
AUR62032265 Chenopodium quinoa HOM05D005044 ORTHO05D006799 1.9e-145 520.0 322 79.5
HPP92_024856 Vanilla planifolia HOM05D005044 ORTHO05D006799 5.4e-145 518.5 436 69.3
PSO461G0059 Papaver somniferum HOM05D005044 ORTHO05D006799 6.0e-144 515.0 337 77.4
Nitab4.5_0004093g0010 Nicotiana tabacum HOM05D005044 ORTHO05D006799 3.9e-143 512.3 408 71.8
CDE07G1918 Ceratophyllum demersum HOM05D005044 ORTHO05D006799 8.6e-143 511.1 452 60.8
EL10Ac5g10465 Beta vulgaris HOM05D005044 ORTHO05D006799 1.9e-142 510.0 337 76.9
GSVIVG01000712001 Vitis vinifera HOM05D005044 ORTHO05D006799 1.9e-142 510.0 275 88.4
Cc01_g18890 Coffea canephora HOM05D005044 ORTHO05D006799 3.3e-142 509.2 314 79.6
Nitab4.5_0000393g0110 Nicotiana tabacum HOM05D005044 ORTHO05D006799 4.7e-141 505.4 401 71.6
SHI09971 Sapria himalayana HOM05D005044 ORTHO05D006799 4.0e-140 502.3 466 60.9
Os10g0415900 Oryza sativa ssp. japonica HOM05D005044 ORTHO05D006799 5.8e-139 498.4 286 82.9
ATR0665G603 Amborella trichopoda HOM05D005044 ORTHO05D006799 1.7e-138 496.9 292 81.5
Sabra05G0166600 Salix brachista HOM05D005044 ORTHO05D006799 7.8e-136 488.0 513 56.7
SEGI_32822 Sequoiadendron giganteum HOM05D005044 ORTHO05D006799 1.7e-135 486.9 289 79.2
Peaxi162Scf01826g00015 Petunia axillaris HOM05D005044 ORTHO05D006799 2.3e-135 486.5 397 69.8
BcaC02g09057 Brassica carinata HOM05D005044 ORTHO05D006799 5.1e-135 485.3 485 58.1
A04p05170 Brassica napus HOM05D005044 ORTHO05D006799 5.1e-135 485.3 470 59.6
A04p05210 Brassica napus HOM05D005044 ORTHO05D006799 6.6e-135 485.0 481 58.4
BraA04t16230Z Brassica rapa HOM05D005044 ORTHO05D006799 6.6e-135 485.0 481 58.4
BcaC02g09052 Brassica carinata HOM05D005044 ORTHO05D006799 1.9e-134 483.4 468 59.2
BcaB02g08448 Brassica carinata HOM05D005044 ORTHO05D006799 3.3e-134 482.6 479 58.7
BolC4t25361H Brassica oleracea HOM05D005044 ORTHO05D006799 1.1e-132 477.6 468 59.0
C04p37870 Brassica napus HOM05D005044 ORTHO05D006799 1.4e-132 477.2 468 58.8
BcaB01g00175 Brassica carinata HOM05D005044 ORTHO05D006799 5.8e-131 471.9 465 60.6
C04p37940 Brassica napus HOM05D005044 ORTHO05D006799 8.4e-130 468.0 471 57.5
BolC4t25370H Brassica oleracea HOM05D005044 ORTHO05D006799 1.1e-129 467.6 471 56.9
Rhsim01G0270400 Rhododendron simsii HOM05D005044 ORTHO05D006799 1.9e-129 466.8 586 54.1
Aqoxy5G00364 Aquilegia oxysepala HOM05D005044 ORTHO05D006799 5.4e-129 465.3 460 58.7
BraA04t16227Z Brassica rapa HOM05D005044 ORTHO05D006799 5.4e-129 465.3 470 57.9
Ah.11g050040 Amaranthus hybridus HOM05D005044 ORTHO05D006799 6.6e-127 458.4 260 83.8
Medtr8g062330 Medicago truncatula HOM05D005044 ORTHO05D006799 1.9e-126 456.8 293 76.8
CARHR164510 Cardamine hirsuta HOM05D005044 ORTHO05D006799 2.5e-126 456.4 394 68.3
Pp3c2_9560 Physcomitrium patens HOM05D005044 ORTHO05D006799 2.1e-125 453.4 285 75.1
SMO367G0544 Selaginella moellendorffii HOM05D005044 ORTHO05D006799 6.4e-122 441.8 290 71.0
Mapoly0187s0003 Marchantia polymorpha HOM05D005044 ORTHO05D006799 6.7e-119 431.8 279 71.3
Zm00001eb223040 Zea mays HOM05D005044 ORTHO05D006799 5.8e-115 418.7 239 83.7
CBR_g46433 Chara braunii HOM05D005044 ORTHO05D006799 8.7e-111 404.8 239 75.3
Oeu018178.1 Olea europaea HOM05D005044 ORTHO05D006799 2.5e-110 403.3 462 52.6
GSVIVG01000713001 Vitis vinifera HOM05D005044 ORTHO05D006799 9.0e-108 394.8 259 72.2
AagrBONN_evm.TU.Sc2ySwM_117.1037 Anthoceros agrestis HOM05D005044 ORTHO05D006799 4.5e-99 365.9 219 77.2
unitig_22.g5955 Utricularia gibba HOM05D005044 ORTHO05D006799 7.4e-94 348.6 335 61.5
vmacro14878 Vaccinium macrocarpon HOM05D005044 ORTHO05D006799 2.6e-86 323.6 210 76.7
MCO07G152 Micromonas commoda HOM05D005044 ORTHO05D006799 1.1e-81 308.1 259 54.4
Sabra02G0036800 Salix brachista HOM05D005044 ORTHO05D006799 9.1e-76 288.5 160 86.9
Cre06.g256200 Chlamydomonas reinhardtii HOM05D005044 ORTHO05D006799 2.9e-74 283.5 302 49.3
Sabra02G0036900 Salix brachista HOM05D005044 ORTHO05D006799 2.9e-66 256.9 279 62.4
PRCOL_00003272 Prasinoderma coloniale HOM05D005044 ORTHO05D006799 9.8e-62 241.9 256 47.3
Cfa021827 Carpinus fangiana HOM05D005044 ORTHO05D006799 3.2e-57 226.9 229 46.7
unitig_22.g5954 Utricularia gibba HOM05D005044 ORTHO05D006799 2.8e-53 213.8 132 75.8
vmacro14879 Vaccinium macrocarpon HOM05D005044 ORTHO05D006799 3.5e-51 206.8 152 75.0
Haze_26753 Corylus avellana HOM05D005044 ORTHO05D006799 3.4e-46 190.3 235 41.7
FAN07G0333 Fragaria x ananassa HOM05D005044 ORTHO05D020615 3.6e-24 117.1 83 73.5
BraA09t40212Z Brassica rapa HOM05D005044 ORTHO05D006799 1.7e-21 108.2 133 43.6
Actinidia30711 Actinidia chinensis HOM05D005044 ORTHO05D006799 9.2e-20 102.4 59 81.4
FAN24G2420 Fragaria x ananassa HOM05D005044 ORTHO05D020615 1.6e-19 101.7 114 52.6
BolC9t54871H Brassica oleracea HOM05D005044 ORTHO05D006799 7.8e-19 99.4 237 37.1
BcaC04g22409 Brassica carinata HOM05D005044 ORTHO05D000065 1.2e-16 92.0 237 35.4
C09p19690 Brassica napus HOM05D005044 ORTHO05D006799 6.2e-16 89.7 242 34.7
Lsat_1_v5_gn_2_63120 Lactuca sativa HOM05D005044 ORTHO05D006799 5.4e-12 76.6 48 75.0
FvH4_4g08670 Fragaria vesca HOM05D005044 ORTHO05D006799 9.3e-12 75.9 54 68.5
Actinidia04660 Actinidia chinensis HOM05D003696 ORTHO05D005158 7.8e-11 72.8 198 37.4
Dinv08224 Davidia involucrata HOM05D051781 ORTHO05D178724 3.6e-08 63.9 32 90.6
QL05p088342 Quercus lobata HOM05D000009 ORTHO05D000008 3.1e-07 60.8 65 60.0


User provided reference genes

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