Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa002220 Carpinus fangiana HOM05D003118 ORTHO05D003618 1.2e-65 253.1 132 100.0
Cfa003868 Carpinus fangiana HOM05D003118 ORTHO05D003618 3.4e-60 235.0 132 93.2
Haze_15568 Corylus avellana HOM05D003118 ORTHO05D003618 9.3e-58 226.9 131 90.8
QL04p055623 Quercus lobata HOM05D003118 ORTHO05D003618 3.0e-32 142.1 131 61.1
Thecc.03G287000 Theobroma cacao HOM05D003118 ORTHO05D003618 1.4e-16 90.1 124 44.4
TAR375G0293 Trochodendron aralioides HOM05D003118 ORTHO05D003618 4.4e-15 85.1 123 43.9
TAR629G1012 Trochodendron aralioides HOM05D003118 ORTHO05D003618 9.7e-15 84.0 124 44.4
Nn6g32462 Nelumbo nucifera HOM05D003118 ORTHO05D003618 3.7e-14 82.0 124 44.4
Duzib205G0707 Durio zibethinus HOM05D003118 ORTHO05D003618 1.8e-13 79.7 124 41.1
MD14G1112600 Malus domestica HOM05D003118 ORTHO05D003618 5.3e-13 78.2 121 40.5
QL02p033307 Quercus lobata HOM05D003118 ORTHO05D003618 5.3e-13 78.2 124 41.9
QL93p0326_0020 Quercus lobata HOM05D003118 ORTHO05D003618 5.3e-13 78.2 124 41.9
Gohir.D08G134400 Gossypium hirsutum HOM05D003118 ORTHO05D003618 1.2e-12 77.0 121 39.7
Gorai.004G137500 Gossypium raimondii HOM05D003118 ORTHO05D003618 1.2e-12 77.0 121 39.7
Haze_08748 Corylus avellana HOM05D003118 ORTHO05D003618 1.6e-12 76.6 122 41.0
Cfa012251 Carpinus fangiana HOM05D003118 ORTHO05D003618 2.0e-12 76.3 122 41.0
Dinv37591 Davidia involucrata HOM05D003118 ORTHO05D003618 7.7e-12 74.3 124 41.1
CSS0022485 Camellia sinensis var. sinensis HOM05D003118 ORTHO05D003618 1.3e-11 73.6 126 39.7
Gohir.A08G114000 Gossypium hirsutum HOM05D003118 ORTHO05D003618 2.2e-11 72.8 121 38.8
MD06G1091800 Malus domestica HOM05D003118 ORTHO05D003618 5.0e-11 71.6 122 38.5
Potri.003G133000 Populus trichocarpa HOM05D003118 ORTHO05D003618 6.5e-11 71.2 96 44.8
Sabra03G0095300 Salix brachista HOM05D003118 ORTHO05D003618 8.5e-11 70.9 96 45.8
Haze_08750 Corylus avellana HOM05D003118 ORTHO05D003618 1.1e-10 70.5 122 38.5
TWI81G0015 Tripterygium wilfordii HOM05D003118 ORTHO05D003618 1.1e-10 70.5 105 43.8
Lj2A177T50 Lonicera japonica HOM05D003118 ORTHO05D003618 2.5e-10 69.3 130 38.5
Actinidia28342 Actinidia chinensis HOM05D003118 ORTHO05D003618 3.2e-10 68.9 115 40.0
TWI14G1154 Tripterygium wilfordii HOM05D003118 ORTHO05D003618 3.2e-10 68.9 78 47.4
COL.COLO4_08355 Corchorus olitorius HOM05D003118 ORTHO05D003618 4.2e-10 68.6 107 41.1
Dinv38896 Davidia involucrata HOM05D003118 ORTHO05D003618 4.2e-10 68.6 103 40.8
Aqoxy7G00197 Aquilegia oxysepala HOM05D003118 ORTHO05D003618 5.5e-10 68.2 97 44.3
Prupe.5G107000 Prunus persica HOM05D003118 ORTHO05D003618 5.5e-10 68.2 105 41.9
FAN08G3653 Fragaria x ananassa HOM05D003118 ORTHO05D003618 9.4e-10 67.4 101 38.6
FvH4_5g03250 Fragaria vesca HOM05D003118 ORTHO05D003618 1.2e-09 67.0 103 38.8
FAN13G0863 Fragaria x ananassa HOM05D003118 ORTHO05D003618 1.2e-09 67.0 103 38.8
FAN18G4078 Fragaria x ananassa HOM05D003118 ORTHO05D003618 1.2e-09 67.0 103 38.8
FAN04G2035 Fragaria x ananassa HOM05D003118 ORTHO05D003618 2.7e-09 65.9 101 38.6
RcHm_v2.0_Chr7g0196521 Rosa chinensis HOM05D003118 ORTHO05D003618 2.7e-09 65.9 103 38.8
GSVIVG01026971001 Vitis vinifera HOM05D003118 ORTHO05D003618 3.6e-09 65.5 128 41.4
Cc08_g15310 Coffea canephora HOM05D003118 ORTHO05D003618 4.7e-09 65.1 120 35.8
Sed0011553 Sechium edule HOM05D003118 ORTHO05D003618 8.0e-09 64.3 114 40.4
FAN04G2118 Fragaria x ananassa HOM05D003118 ORTHO05D003618 2.3e-08 62.8 101 37.6
CiPaw.01G067900 Carya illinoinensis HOM05D003118 ORTHO05D003618 4.0e-08 62.0 79 55.7
Sed0003885 Sechium edule HOM05D003118 ORTHO05D003618 1.2e-07 60.5 114 38.6
CANSAT21G0202 Cannabis sativa HOM05D003118 ORTHO05D003618 1.5e-07 60.1 55 52.7
MELO3C005717.2 Cucumis melo HOM05D003118 ORTHO05D003618 1.5e-07 60.1 126 38.1
Atru.chr9.2107 Acer truncatum HOM05D003118 ORTHO05D003618 2.0e-07 59.7 95 44.2
MBI07_g11721_MAGBIO Magnolia biondii HOM05D003118 ORTHO05D003618 2.0e-07 59.7 96 43.8
PSO384G4225 Papaver somniferum HOM05D003118 ORTHO05D003618 2.6e-07 59.3 93 41.9
Nitab4.5_0005339g0020 Nicotiana tabacum HOM05D003118 ORTHO05D003618 3.3e-07 58.9 70 48.6
PSO266G0003 Papaver somniferum HOM05D003118 ORTHO05D003618 7.5e-07 57.8 108 38.9
Manes.02G016600 Manihot esculenta HOM05D003118 ORTHO05D003618 9.7e-07 57.4 125 38.4
vmacro11412 Vaccinium macrocarpon HOM05D003118 ORTHO05D003618 1.3e-06 57.0 107 35.5
Peaxi162Scf00102g01644 Petunia axillaris HOM05D003118 ORTHO05D003618 1.7e-06 56.6 85 40.0
DCAR_000636 Daucus carota HOM05D003118 ORTHO05D003618 3.7e-06 55.5 92 33.7
AUR62010758 Chenopodium quinoa HOM05D003118 ORTHO05D003618 4.8e-06 55.1 104 40.4
DCAR_004609 Daucus carota HOM05D003118 ORTHO05D003618 4.8e-06 55.1 112 31.2
PGR042G1679 Punica granatum HOM05D003118 ORTHO05D003618 4.8e-06 55.1 94 37.2
MSTRG.13862 Avicennia marina HOM05D003118 ORTHO05D003618 6.3e-06 54.7 91 34.1
FAN20G1199 Fragaria x ananassa HOM05D000212 ORTHO05D003618 6.3e-06 54.7 59 44.1
Ciclev10024541m.g Citrus clementina HOM05D003118 ORTHO05D003618 8.2e-06 54.3 129 33.3


User provided reference genes

Program Settings