Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa002201 Carpinus fangiana HOM05D004721 ORTHO05D005765 2.2e-21 104.8 55 100.0
Cfa005049 Carpinus fangiana HOM05D004721 ORTHO05D005765 2.7e-11 71.2 56 69.6
Cfa005051 Carpinus fangiana HOM05D004721 ORTHO05D005765 2.7e-11 71.2 56 67.9
Cfa010379 Carpinus fangiana HOM05D004721 ORTHO05D122051 7.9e-11 69.7 55 69.1
Haze_02333 Corylus avellana HOM05D004721 ORTHO05D005765 1.1e-09 65.9 61 60.7
Sopen01g052120 Solanum pennellii HOM05D004721 ORTHO05D005765 1.8e-07 58.5 42 66.7
GSVIVG01023826001 Vitis vinifera HOM05D004721 ORTHO05D005765 1.8e-07 58.5 58 55.2
Solyc01g109930.4 Solanum lycopersicum HOM05D004721 ORTHO05D005765 3.1e-07 57.8 42 66.7
PGSC0003DMG400030950 Solanum tuberosum HOM05D004721 ORTHO05D005765 4.1e-07 57.4 42 64.3
MBI10_g00756_MAGBIO Magnolia biondii HOM05D004721 ORTHO05D005765 5.3e-07 57.0 46 50.0
TWI75G0248 Tripterygium wilfordii HOM05D004721 ORTHO05D005765 6.9e-07 56.6 58 51.7
QL11p045210 Quercus lobata HOM05D004721 ORTHO05D005765 1.2e-06 55.8 59 49.2
CAN.G1544.7 Capsicum annuum HOM05D004721 ORTHO05D005765 1.5e-06 55.5 42 61.9
Peaxi162Scf00016g00435 Petunia axillaris HOM05D004721 ORTHO05D005765 1.5e-06 55.5 51 51.0
CiPaw.06G132800 Carya illinoinensis HOM05D004721 ORTHO05D005765 2.0e-06 55.1 60 51.7
Ciclev10028779m.g Citrus clementina HOM05D004721 ORTHO05D005765 2.0e-06 55.1 57 49.1
Nitab4.5_0005796g0050 Nicotiana tabacum HOM05D004721 ORTHO05D005765 2.0e-06 55.1 52 51.9
Thecc.02G080400 Theobroma cacao HOM05D004721 ORTHO05D005765 2.0e-06 55.1 56 51.8
Actinidia00549 Actinidia chinensis HOM05D004721 ORTHO05D005765 2.6e-06 54.7 45 55.6
Dinv42038 Davidia involucrata HOM05D004721 ORTHO05D005765 2.6e-06 54.7 53 52.8
Sc08g0000660 Simmondsia chinensis HOM05D004721 ORTHO05D005765 2.6e-06 54.7 58 50.0
CSS0047334 Camellia sinensis var. sinensis HOM05D004721 ORTHO05D005765 3.4e-06 54.3 58 51.7
CSS0049052 Camellia sinensis var. sinensis HOM05D004721 ORTHO05D005765 3.4e-06 54.3 58 51.7
Lj9A377G93 Lonicera japonica HOM05D004721 ORTHO05D005765 3.4e-06 54.3 60 51.7
AL7G11060 Arabidopsis lyrata HOM05D004721 ORTHO05D005765 5.9e-06 53.5 58 50.0
AT4G39120 Arabidopsis thaliana HOM05D004721 ORTHO05D005765 5.9e-06 53.5 58 50.0
Thhalv10025644m.g Eutrema salsugineum HOM05D004721 ORTHO05D005765 5.9e-06 53.5 51 51.0
Lj5A193T104 Lonicera japonica HOM05D004721 ORTHO05D005765 5.9e-06 53.5 40 60.0
THA.LOC104807751 Tarenaya hassleriana HOM05D004721 ORTHO05D005765 5.9e-06 53.5 45 53.3
BcaB03g12244 Brassica carinata HOM05D004721 ORTHO05D005765 7.7e-06 53.1 58 50.0
ClCG11G004130 Citrullus lanatus HOM05D004721 ORTHO05D005765 7.7e-06 53.1 59 47.5
vmacro02078 Vaccinium macrocarpon HOM05D004721 ORTHO05D005765 7.7e-06 53.1 55 49.1
Cfa005052 Carpinus fangiana HOM05D004721 ORTHO05D005765 1.0e-05 52.8 32 75.0
Dinv23488 Davidia involucrata HOM05D004721 ORTHO05D005765 1.0e-05 52.8 54 50.0
Gohir.A03G196800 Gossypium hirsutum HOM05D004721 ORTHO05D005765 1.0e-05 52.8 56 48.2
Gorai.005G246000 Gossypium raimondii HOM05D004721 ORTHO05D005765 1.0e-05 52.8 56 48.2
Lsat_1_v5_gn_9_107961 Lactuca sativa HOM05D004721 ORTHO05D005765 1.0e-05 52.8 57 52.6
Manes.04G087050 Manihot esculenta HOM05D004721 ORTHO05D005765 1.0e-05 52.8 58 48.3


User provided reference genes

Program Settings