Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa002161 Carpinus fangiana HOM05D008842 ORTHO05D010931 5.0e-64 247.7 130 100.0
Haze_16245 Corylus avellana HOM05D008842 ORTHO05D010931 7.0e-58 227.3 130 91.5
QL05p085140 Quercus lobata HOM05D008842 ORTHO05D010931 2.5e-39 165.6 129 69.8
Thecc.06G049500 Theobroma cacao HOM05D008842 ORTHO05D010931 7.8e-33 144.1 130 63.1
Gohir.A05G116600 Gossypium hirsutum HOM05D008842 ORTHO05D010931 1.0e-32 143.7 131 64.1
Gohir.D05G117500 Gossypium hirsutum HOM05D008842 ORTHO05D010931 1.0e-32 143.7 131 64.1
Gorai.009G121400 Gossypium raimondii HOM05D008842 ORTHO05D010931 1.0e-32 143.7 131 64.1
CiPaw.01G092500 Carya illinoinensis HOM05D008842 ORTHO05D010931 3.0e-32 142.1 135 60.7
Duzib235G0617 Durio zibethinus HOM05D008842 ORTHO05D010931 5.6e-31 137.9 134 62.7
Ciclev10029553m.g Citrus clementina HOM05D008842 ORTHO05D010931 6.4e-27 124.4 134 56.0
COL.COLO4_26810 Corchorus olitorius HOM05D008842 ORTHO05D010931 6.4e-27 124.4 128 57.8
Sp1g14880 Schrenkiella parvula HOM05D008842 ORTHO05D010931 4.1e-26 121.7 128 53.1
Aa31LG7G1190 Aethionema arabicum HOM05D008842 ORTHO05D010931 2.7e-25 119.0 130 52.3
Carub.0001s1647 Capsella rubella HOM05D008842 ORTHO05D010931 2.7e-25 119.0 128 53.1
CARHR017190 Cardamine hirsuta HOM05D008842 ORTHO05D010931 3.5e-25 118.6 128 53.9
Thhalv10008754m.g Eutrema salsugineum HOM05D008842 ORTHO05D010931 7.8e-25 117.5 128 51.6
THA.LOC104812345 Tarenaya hassleriana HOM05D008842 ORTHO05D010931 1.0e-24 117.1 129 54.3
AT1G16730 Arabidopsis thaliana HOM05D008842 ORTHO05D010931 2.3e-24 115.9 128 49.2
GSVIVG01029445001 Vitis vinifera HOM05D008842 ORTHO05D010931 6.6e-24 114.4 131 55.7
EL10Ac8g19754 Beta vulgaris HOM05D008842 ORTHO05D010931 8.6e-24 114.0 123 55.3
AL1G28900 Arabidopsis lyrata HOM05D008842 ORTHO05D010931 1.9e-23 112.8 129 51.2
ATR0626G313 Amborella trichopoda HOM05D008842 ORTHO05D010931 4.0e-21 105.1 129 49.6
SEGI_04041 Sequoiadendron giganteum HOM05D008842 ORTHO05D010931 5.8e-20 101.3 140 47.9
BcaB03g13035 Brassica carinata HOM05D008842 ORTHO05D010931 1.7e-19 99.8 104 52.9
BraA08t35054Z Brassica rapa HOM05D008842 ORTHO05D010931 2.4e-18 95.9 104 52.9
BcaC07g38810 Brassica carinata HOM05D008842 ORTHO05D010931 3.2e-18 95.5 103 49.5
CANSAT01G2106 Cannabis sativa HOM05D008842 ORTHO05D010931 2.1e-17 92.8 102 52.9
Ah.09g232810 Amaranthus hybridus HOM05D008842 ORTHO05D010931 6.0e-17 91.3 121 44.6
SEGI_26270 Sequoiadendron giganteum HOM05D008842 ORTHO05D010931 1.7e-16 89.7 106 47.2
A08p31310 Brassica napus HOM05D008842 ORTHO05D010931 3.0e-16 89.0 104 49.0
MD04G1031600 Malus domestica HOM05D008842 ORTHO05D010931 5.1e-16 88.2 74 60.8
AUR62027592 Chenopodium quinoa HOM05D008842 ORTHO05D010931 6.6e-16 87.8 67 59.7
Sc05g0006440 Simmondsia chinensis HOM05D008842 ORTHO05D010931 5.6e-15 84.7 103 51.5
Potri.007G003700 Populus trichocarpa HOM05D008842 ORTHO05D010931 1.1e-13 80.5 130 43.8
FAN14G1571 Fragaria x ananassa HOM05D008842 ORTHO05D010931 5.3e-13 78.2 100 47.0
FAN14G3737 Fragaria x ananassa HOM05D008842 ORTHO05D010931 5.3e-13 78.2 100 47.0
FvH4_6g36360 Fragaria vesca HOM05D008842 ORTHO05D010931 2.0e-12 76.3 100 46.0
FAN02G3250 Fragaria x ananassa HOM05D008842 ORTHO05D010931 2.7e-09 65.9 78 46.2
FAN09G2833 Fragaria x ananassa HOM05D008842 ORTHO05D010931 1.3e-08 63.5 76 46.1


User provided reference genes

Program Settings