Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa002160 Carpinus fangiana HOM05D007341 ORTHO05D009075 3.0e-93 345.1 172 100.0
Haze_16246 Corylus avellana HOM05D007341 ORTHO05D009075 1.7e-83 312.8 172 92.4
QL05p085130 Quercus lobata HOM05D007341 ORTHO05D009075 4.7e-62 241.5 182 72.0
CiPaw.01G092200 Carya illinoinensis HOM05D007341 ORTHO05D009075 2.6e-60 235.7 146 82.9
FvH4_6g36350 Fragaria vesca HOM05D007341 ORTHO05D009075 6.9e-53 211.1 173 65.3
FAN02G2832 Fragaria x ananassa HOM05D007341 ORTHO05D009075 1.2e-52 210.3 173 65.3
Prupe.3G028000 Prunus persica HOM05D007341 ORTHO05D009075 2.6e-52 209.1 125 86.4
FAN09G2851 Fragaria x ananassa HOM05D007341 ORTHO05D009075 5.8e-52 208.0 173 64.7
Sabra07G0002700 Salix brachista HOM05D007341 ORTHO05D009075 2.2e-51 206.1 176 64.8
Duzib235G0177 Durio zibethinus HOM05D007341 ORTHO05D009075 7.1e-50 201.1 169 68.0
MD09G1169800 Malus domestica HOM05D007341 ORTHO05D009075 1.2e-49 200.3 178 62.9
Potri.007G003600 Populus trichocarpa HOM05D007341 ORTHO05D009075 1.2e-49 200.3 176 62.5
TWI12G0959 Tripterygium wilfordii HOM05D007341 ORTHO05D009075 1.2e-49 200.3 118 84.7
Gohir.A05G116700 Gossypium hirsutum HOM05D007341 ORTHO05D009075 6.0e-49 198.0 171 64.9
Gorai.009G121500 Gossypium raimondii HOM05D007341 ORTHO05D009075 1.0e-48 197.2 170 64.1
Gohir.D05G117600 Gossypium hirsutum HOM05D007341 ORTHO05D009075 1.3e-48 196.8 171 64.3
GSVIVG01029444001 Vitis vinifera HOM05D007341 ORTHO05D009075 1.3e-48 196.8 106 87.7
RcHm_v2.0_Chr2g0148351 Rosa chinensis HOM05D007341 ORTHO05D009075 1.8e-48 196.4 172 62.8
Sed0003722 Sechium edule HOM05D007341 ORTHO05D009075 5.1e-48 194.9 98 89.8
Dinv20313 Davidia involucrata HOM05D007341 ORTHO05D009075 3.3e-47 192.2 142 71.1
MELO3C019561.2 Cucumis melo HOM05D007341 ORTHO05D009075 5.6e-47 191.4 103 85.4
CsaV3_3G018050 Cucumis sativus L. HOM05D007341 ORTHO05D009075 7.4e-47 191.0 94 91.5
Thecc.06G049400 Theobroma cacao HOM05D007341 ORTHO05D009075 9.6e-47 190.7 167 63.5
Glyma.15G000400 Glycine max HOM05D007341 ORTHO05D009075 1.3e-46 190.3 131 74.0
CANSAT01G1666 Cannabis sativa HOM05D007341 ORTHO05D009075 1.6e-46 189.9 102 86.3
Lsat_1_v5_gn_9_114620 Lactuca sativa HOM05D007341 ORTHO05D009075 1.8e-45 186.4 102 85.3
TAR636G1203 Trochodendron aralioides HOM05D007341 ORTHO05D009075 3.1e-45 185.7 148 66.9
Eucgr.F04060 Eucalyptus grandis HOM05D007341 ORTHO05D009075 9.0e-45 184.1 139 66.2
HanXRQChr03g0072101 Helianthus annuus HOM05D007341 ORTHO05D009075 1.2e-44 183.7 101 85.1
CSS0015626 Camellia sinensis var. sinensis HOM05D007341 ORTHO05D009075 1.5e-44 183.3 134 73.1
Ciclev10029418m.g Citrus clementina HOM05D007341 ORTHO05D009075 2.6e-44 182.6 168 57.7
Hma1.2p1_0422F.1_g150100 Hydrangea macrophylla HOM05D007341 ORTHO05D009075 3.4e-44 182.2 126 73.8
Phvul.005G082000 Phaseolus vulgaris HOM05D007341 ORTHO05D009075 3.4e-44 182.2 131 69.5
THA.LOC104808109 Tarenaya hassleriana HOM05D007341 ORTHO05D009075 1.7e-43 179.9 169 58.6
Cc06_g16890 Coffea canephora HOM05D007341 ORTHO05D009075 4.9e-43 178.3 130 72.3
PGR102G3137 Punica granatum HOM05D007341 ORTHO05D009075 1.4e-42 176.8 137 65.0
Nitab4.5_0000349g0220 Nicotiana tabacum HOM05D007341 ORTHO05D009075 2.4e-42 176.0 97 83.5
ECA240G2002 Erigeron canadensis HOM05D007341 ORTHO05D009075 3.2e-42 175.6 131 69.5
Sopen10g035850 Solanum pennellii HOM05D007341 ORTHO05D009075 4.2e-42 175.3 129 69.0
PGSC0003DMG400019203 Solanum tuberosum HOM05D007341 ORTHO05D009075 5.5e-42 174.9 129 69.0
BraA07t30379Z Brassica rapa HOM05D007341 ORTHO05D009075 9.3e-42 174.1 165 57.0
Migut.K00075 Erythranthe guttata HOM05D007341 ORTHO05D009075 1.2e-41 173.7 125 69.6
Solyc10g086470.2 Solanum lycopersicum HOM05D007341 ORTHO05D009075 1.2e-41 173.7 129 68.2
MSTRG.26115 Avicennia marina HOM05D007341 ORTHO05D009075 4.6e-41 171.8 138 67.4
A07p27380 Brassica napus HOM05D007341 ORTHO05D009075 4.6e-41 171.8 165 56.4
Carub.0002s2586 Capsella rubella HOM05D007341 ORTHO05D009075 1.0e-40 170.6 143 61.5
DCAR_027600 Daucus carota HOM05D007341 ORTHO05D009075 1.3e-40 170.2 127 67.7
BcaB02g07190 Brassica carinata HOM05D007341 ORTHO05D009075 1.8e-40 169.9 168 54.8
CARHR072660 Cardamine hirsuta HOM05D007341 ORTHO05D009075 5.1e-40 168.3 168 55.4
BcaC08g45393 Brassica carinata HOM05D007341 ORTHO05D009075 6.7e-40 167.9 166 56.0
C06p30240 Brassica napus HOM05D007341 ORTHO05D009075 6.7e-40 167.9 166 56.0
BolC6t38187H Brassica oleracea HOM05D007341 ORTHO05D009075 6.7e-40 167.9 166 56.0
Lalb_Chr24g0392671 Lupinus albus HOM05D007341 ORTHO05D009075 6.7e-40 167.9 135 66.7
AT1G78995 Arabidopsis thaliana HOM05D007341 ORTHO05D009075 1.1e-39 167.2 147 59.2
Thhalv10019269m.g Eutrema salsugineum HOM05D007341 ORTHO05D009075 1.9e-39 166.4 168 54.2
FAN14G2925 Fragaria x ananassa HOM05D007341 ORTHO05D009075 1.9e-39 166.4 173 56.6
FAN14G4935 Fragaria x ananassa HOM05D007341 ORTHO05D009075 1.9e-39 166.4 173 56.6
Medtr6g004140 Medicago truncatula HOM05D007341 ORTHO05D009075 1.9e-39 166.4 140 62.9
Sp5g34040 Schrenkiella parvula HOM05D007341 ORTHO05D009075 7.4e-39 164.5 168 53.0
Actinidia38822 Actinidia chinensis HOM05D007341 ORTHO05D009075 4.8e-38 161.8 132 68.9
LjContig00482g0010930 Lotus japonicus HOM05D007341 ORTHO05D009075 8.2e-38 161.0 124 66.9
AUR62001305 Chenopodium quinoa HOM05D007341 ORTHO05D009075 2.4e-37 159.5 124 65.3
AUR62025687 Chenopodium quinoa HOM05D007341 ORTHO05D009075 2.4e-37 159.5 134 62.7
VMungo1080G1509 Vigna mungo HOM05D007341 ORTHO05D009075 3.1e-37 159.1 133 63.9
unitig_748.g7237 Utricularia gibba HOM05D007341 ORTHO05D009075 6.9e-37 157.9 140 62.9
Mapoly0061s0126 Marchantia polymorpha HOM05D007341 ORTHO05D009075 1.5e-36 156.8 101 73.3
Aqoxy7G02561 Aquilegia oxysepala HOM05D007341 ORTHO05D009075 2.0e-36 156.4 122 64.8
Pp3c15_22740 Physcomitrium patens HOM05D007341 ORTHO05D009075 5.8e-36 154.8 103 69.9
AL2G39450 Arabidopsis lyrata HOM05D007341 ORTHO05D009075 1.0e-35 154.1 166 52.4
EL10Ac7g18105 Beta vulgaris HOM05D007341 ORTHO05D009075 1.0e-35 154.1 128 61.7
Hund18551 Selenicereus undatus HOM05D007341 ORTHO05D009075 1.0e-35 154.1 110 68.2
SGA_v2.0_scaffold94G28462 Striga asiatica HOM05D007341 ORTHO05D009075 2.2e-35 152.9 149 60.4
HPP92_026441 Vanilla planifolia HOM05D007341 ORTHO05D009075 3.8e-35 152.1 138 61.6
CDE05G1356 Ceratophyllum demersum HOM05D007341 ORTHO05D009075 4.2e-34 148.7 123 61.8
ClCG05G010440 Citrullus lanatus HOM05D007341 ORTHO05D009075 9.3e-34 147.5 81 84.0
PSO170G4447 Papaver somniferum HOM05D007341 ORTHO05D009075 1.3e-32 143.7 127 63.8
PSO063G2737 Papaver somniferum HOM05D007341 ORTHO05D009075 3.9e-32 142.1 127 63.0
ATR0626G096 Amborella trichopoda HOM05D007341 ORTHO05D009075 6.7e-32 141.4 131 61.8
Cpa.g.sc4293.1 Carica papaya HOM05D007341 ORTHO05D009075 3.3e-31 139.0 128 58.6
Zm00001eb227230 Zea mays HOM05D007341 ORTHO05D009075 7.4e-31 137.9 118 61.9
Nn8g41280 Nelumbo nucifera HOM05D007341 ORTHO05D009075 1.6e-30 136.7 127 59.8
DCAR_011722 Daucus carota HOM05D007341 ORTHO05D009075 3.7e-30 135.6 133 55.6
Sc16g0003760 Simmondsia chinensis HOM05D007341 ORTHO05D009075 1.3e-27 127.1 80 78.8
Os06g0704200 Oryza sativa ssp. japonica HOM05D007341 ORTHO05D009075 2.2e-27 126.3 119 59.7
SMO232G0085 Selaginella moellendorffii HOM05D007341 ORTHO05D009075 2.2e-27 126.3 142 52.1
Nitab4.5_0001911g0010 Nicotiana tabacum HOM05D007341 ORTHO05D009075 2.9e-27 125.9 176 47.7
Sabra14G0002900 Salix brachista HOM05D007341 ORTHO05D009075 1.1e-26 124.0 89 69.7
Manes.06G177800 Manihot esculenta HOM05D007341 ORTHO05D009075 2.5e-26 122.9 110 61.8
C02p36120 Brassica napus HOM05D007341 ORTHO05D009075 1.3e-22 110.5 66 75.8
Oeu004021.1 Olea europaea HOM05D007341 ORTHO05D009075 1.7e-22 110.2 108 59.3
Rhsim08G0252300 Rhododendron simsii HOM05D000912 ORTHO05D009075 1.4e-21 107.1 99 63.6
vmacro18722 Vaccinium macrocarpon HOM05D007341 ORTHO05D009075 4.1e-21 105.5 123 53.7
Peaxi162Scf00330g00029 Petunia axillaris HOM05D007341 ORTHO05D009075 2.0e-20 103.2 180 43.9
Aa31LG4G1990 Aethionema arabicum HOM05D007341 ORTHO05D009075 3.4e-20 102.4 67 71.6
Cre01.g000800 Chlamydomonas reinhardtii HOM05D007341 ORTHO05D009075 1.0e-19 100.9 123 45.5
SalBow1G8719 Salvia bowleyana HOM05D007341 ORTHO05D009075 2.9e-19 99.4 110 52.7
Psat6g000680 Pisum sativum HOM05D007341 ORTHO05D009075 3.8e-19 99.0 92 63.0
Lj9A544T49 Lonicera japonica HOM05D007341 ORTHO05D009075 6.5e-19 98.2 79 70.9
SalBow1G7986 Salvia bowleyana HOM05D007341 ORTHO05D009075 3.2e-18 95.9 87 59.8
Os02g0138100 Oryza sativa ssp. japonica HOM05D007341 ORTHO05D009075 2.1e-17 93.2 81 58.0
MBI13_g34919_MAGBIO Magnolia biondii HOM05D007341 ORTHO05D009075 2.0e-15 86.7 85 62.4
MCO04G269 Micromonas commoda HOM05D007341 ORTHO05D009075 3.3e-15 85.9 112 41.1
Ah.08g218010 Amaranthus hybridus HOM05D007341 ORTHO05D009075 5.7e-15 85.1 127 44.9
AagrBONN_evm.TU.Sc2ySwM_368.1307 Anthoceros agrestis HOM05D007341 ORTHO05D009075 9.7e-15 84.3 69 62.3
PRCOL_00000561 Prasinoderma coloniale HOM05D007341 ORTHO05D009075 1.3e-11 73.9 134 37.3
Zm00001eb231900 Zea mays HOM05D007341 ORTHO05D009075 7.2e-10 68.2 113 37.2


User provided reference genes

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