Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa002056 Carpinus fangiana HOM05D006797 ORTHO05D007696 2.4e-81 305.4 155 100.0
Cfa001151 Carpinus fangiana HOM05D000071 ORTHO05D000029 9.6e-30 134.0 171 53.8
Haze_05201 Corylus avellana HOM05D000001 ORTHO05D010268 4.9e-26 121.7 75 86.7
Haze_24216 Corylus avellana HOM05D006797 ORTHO05D007696 9.6e-22 107.5 156 44.9
QL11p011767 Quercus lobata HOM05D006797 ORTHO05D007696 2.6e-19 99.4 154 46.8
CiPaw.10G107100 Carya illinoinensis HOM05D006797 ORTHO05D007696 2.7e-16 89.4 147 44.9
TAR626G0010 Trochodendron aralioides HOM05D006797 ORTHO05D007696 1.3e-13 80.5 155 40.6
Lalb_Chr07g0188191 Lupinus albus HOM05D006797 ORTHO05D007696 4.1e-12 75.5 155 38.7
Prupe.4G119300 Prunus persica HOM05D006797 ORTHO05D007696 9.0e-12 74.3 159 37.7
GSVIVG01012170001 Vitis vinifera HOM05D006797 ORTHO05D007696 2.0e-11 73.2 156 39.7
Sc24g0002860 Simmondsia chinensis HOM05D006797 ORTHO05D007696 7.7e-11 71.2 152 36.8
RcHm_v2.0_Chr5g0021541 Rosa chinensis HOM05D006797 ORTHO05D007696 1.7e-10 70.1 156 37.8
Ciclev10017227m.g Citrus clementina HOM05D006797 ORTHO05D007696 2.9e-10 69.3 150 36.0
Medtr4g094782 Medicago truncatula HOM05D006797 ORTHO05D007696 2.9e-10 69.3 157 36.9
Sed0011432 Sechium edule HOM05D006797 ORTHO05D007696 2.9e-10 69.3 158 39.9
ClCG01G025860 Citrullus lanatus HOM05D006797 ORTHO05D007696 5.0e-10 68.6 156 37.2
PGR042G0784 Punica granatum HOM05D006797 ORTHO05D007696 6.5e-10 68.2 155 36.8
Haze_15747 Corylus avellana HOM05D006797 ORTHO05D007696 2.5e-09 66.2 33 100.0
MD10G1226000 Malus domestica HOM05D006797 ORTHO05D007696 2.5e-09 66.2 154 34.4
Ah.15g091850 Amaranthus hybridus HOM05D006797 ORTHO05D007696 3.2e-09 65.9 155 36.1
vmacro03563 Vaccinium macrocarpon HOM05D006797 ORTHO05D007696 3.2e-09 65.9 208 34.1
Ca_18220_v3 Cicer arietinum L. HOM05D006797 ORTHO05D007696 4.2e-09 65.5 156 36.5
SGA_v2.0_scaffold60G20810 Striga asiatica HOM05D006797 ORTHO05D007696 4.2e-09 65.5 157 36.9
EL10Ac7g17249 Beta vulgaris HOM05D006797 ORTHO05D007696 5.5e-09 65.1 153 35.9
MELO3C007002.2 Cucumis melo HOM05D006797 ORTHO05D007696 5.5e-09 65.1 156 34.0
Glyma.05G134500 Glycine max HOM05D006797 ORTHO05D007696 7.2e-09 64.7 158 36.1
Phvul.002G187600 Phaseolus vulgaris HOM05D006797 ORTHO05D007696 9.4e-09 64.3 149 36.2
arahy.Tifrunner.gnm1.ann1.30I9D2 Arachis hypogaea HOM05D006797 ORTHO05D007696 1.2e-08 63.9 153 34.0
arahy.Tifrunner.gnm1.ann1.3X9X11 Arachis hypogaea HOM05D006797 ORTHO05D007696 1.2e-08 63.9 153 34.0
TWI38G0311 Tripterygium wilfordii HOM05D006797 ORTHO05D007696 1.2e-08 63.9 147 35.4
Dinv03172 Davidia involucrata HOM05D006797 ORTHO05D007696 3.6e-08 62.4 156 35.3
Glyma.08G089600 Glycine max HOM05D006797 ORTHO05D007696 3.6e-08 62.4 153 34.0
SGA_v2.0_scaffold44G16576 Striga asiatica HOM05D001006 ORTHO05D000868 3.6e-08 62.4 156 37.2
Oeu036765.2 Olea europaea HOM05D006797 ORTHO05D007696 6.1e-08 61.6 154 37.7
CsaV3_6G053080 Cucumis sativus L. HOM05D006797 ORTHO05D007696 7.9e-08 61.2 156 33.3
MSTRG.8842 Avicennia marina HOM05D006797 ORTHO05D007696 1.0e-07 60.8 153 36.6
Atru.chr10.261 Acer truncatum HOM05D006797 ORTHO05D007696 1.8e-07 60.1 155 34.2
Psat7g087040 Pisum sativum HOM05D006797 ORTHO05D007696 2.3e-07 59.7 157 35.0
Hma1.2p1_1220F.1_g268030 Hydrangea macrophylla HOM05D006797 ORTHO05D007696 3.0e-07 59.3 154 33.1
VMungo0251G2933 Vigna mungo HOM05D006797 ORTHO05D007696 3.0e-07 59.3 142 34.5
Manes.03G071800 Manihot esculenta HOM05D006797 ORTHO05D007696 5.1e-07 58.5 156 34.6
Rhsim13G0134800 Rhododendron simsii HOM05D006797 ORTHO05D007696 5.1e-07 58.5 158 34.2
Migut.F00519 Erythranthe guttata HOM05D006797 ORTHO05D007696 6.7e-07 58.2 153 34.6
FAN21G4013 Fragaria x ananassa HOM05D006797 ORTHO05D007696 1.1e-06 57.4 156 32.1
Cpa.g.sc30.90 Carica papaya HOM05D006797 ORTHO05D007696 1.5e-06 57.0 137 34.3
FAN25G1182 Fragaria x ananassa HOM05D006797 ORTHO05D007696 1.5e-06 57.0 156 32.1
TPR.G27392 Trifolium pratense HOM05D006797 ORTHO05D007696 2.0e-06 56.6 155 32.9
FAN16G2513 Fragaria x ananassa HOM05D006797 ORTHO05D007696 2.5e-06 56.2 156 31.4
CSS0049260 Camellia sinensis var. sinensis HOM05D006797 ORTHO05D007696 4.3e-06 55.5 159 36.5
FvH4_3g13200 Fragaria vesca HOM05D006797 ORTHO05D007696 5.7e-06 55.1 156 31.4
FAN11G3985 Fragaria x ananassa HOM05D006797 ORTHO05D007696 5.7e-06 55.1 156 31.4
Duzib211G0055 Durio zibethinus HOM05D006797 ORTHO05D007696 7.4e-06 54.7 160 36.2


User provided reference genes

Program Settings