Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa001994 Carpinus fangiana HOM05D007863 ORTHO05D009265 3.7e-42 174.5 90 100.0
Haze_16524 Corylus avellana HOM05D007863 ORTHO05D009265 1.7e-23 112.5 100 74.0
QL05p028236 Quercus lobata HOM05D007863 ORTHO05D009265 1.0e-15 86.7 96 63.5
Prupe.3G082000 Prunus persica HOM05D007863 ORTHO05D009265 3.9e-15 84.7 97 58.8
CiPaw.01G245400 Carya illinoinensis HOM05D007863 ORTHO05D009265 2.8e-13 78.6 97 54.6
Thecc.06G070300 Theobroma cacao HOM05D007863 ORTHO05D009265 3.6e-13 78.2 51 80.4
RcHm_v2.0_Chr2g0136401 Rosa chinensis HOM05D007863 ORTHO05D009265 4.7e-13 77.8 99 54.5
FvH4_6g30170 Fragaria vesca HOM05D007863 ORTHO05D009265 8.1e-13 77.0 97 53.6
FAN09G3905 Fragaria x ananassa HOM05D007863 ORTHO05D009265 8.1e-13 77.0 95 52.6
FAN14G0247 Fragaria x ananassa HOM05D007863 ORTHO05D009265 8.1e-13 77.0 97 53.6
FAN05G0465 Fragaria x ananassa HOM05D007863 ORTHO05D009265 1.4e-12 76.3 97 52.6
CAN.G407.102 Capsicum annuum HOM05D007863 ORTHO05D009265 3.1e-12 75.1 51 74.5
Solyc03g116510.1 Solanum lycopersicum HOM05D007863 ORTHO05D009265 3.1e-12 75.1 49 77.6
Sopen03g035400 Solanum pennellii HOM05D007863 ORTHO05D009265 3.1e-12 75.1 49 77.6
arahy.Tifrunner.gnm1.ann1.JQ3RYK Arachis hypogaea HOM05D007863 ORTHO05D009265 4.0e-12 74.7 83 51.8
Ciclev10027122m.g Citrus clementina HOM05D007863 ORTHO05D009265 4.0e-12 74.7 96 52.1
FAN02G1499 Fragaria x ananassa HOM05D007863 ORTHO05D009265 4.0e-12 74.7 98 52.0
Gohir.A10G075500 Gossypium hirsutum HOM05D007863 ORTHO05D009265 5.3e-12 74.3 93 55.9
Sabra03G0036200 Salix brachista HOM05D007863 ORTHO05D009265 5.3e-12 74.3 94 51.1
Gohir.D10G076000 Gossypium hirsutum HOM05D007863 ORTHO05D009265 6.9e-12 73.9 93 55.9
Gorai.011G081800 Gossypium raimondii HOM05D007863 ORTHO05D009265 6.9e-12 73.9 93 55.9
Hma1.2p1_0515F.1_g170180 Hydrangea macrophylla HOM05D007863 ORTHO05D009265 6.9e-12 73.9 51 80.4
Cpa.g.sc10.233 Carica papaya HOM05D007863 ORTHO05D009265 9.0e-12 73.6 49 77.6
CANSAT56G0457 Cannabis sativa HOM05D007863 ORTHO05D009265 1.2e-11 73.2 43 88.4
Rhsim08G0215300 Rhododendron simsii HOM05D007863 ORTHO05D009265 1.2e-11 73.2 92 53.3
Nitab4.5_0001764g0040 Nicotiana tabacum HOM05D007863 ORTHO05D009265 2.0e-11 72.4 51 72.5
Potri.003G062300 Populus trichocarpa HOM05D007863 ORTHO05D009265 2.0e-11 72.4 49 79.6
TWI12G0528 Tripterygium wilfordii HOM05D007863 ORTHO05D009265 2.6e-11 72.0 52 78.8
CSS0005162 Camellia sinensis var. sinensis HOM05D007863 ORTHO05D009265 3.4e-11 71.6 48 77.1
Nitab4.5_0010254g0050 Nicotiana tabacum HOM05D007863 ORTHO05D009265 3.4e-11 71.6 60 63.3
Ca_01070_v3 Cicer arietinum L. HOM05D007863 ORTHO05D009265 4.4e-11 71.2 47 76.6
Manes.04G115800 Manihot esculenta HOM05D007863 ORTHO05D009265 4.4e-11 71.2 64 62.5
PGR102G1764 Punica granatum HOM05D007863 ORTHO05D009265 7.6e-11 70.5 50 72.0
COL.COLO4_12919 Corchorus olitorius HOM05D007863 ORTHO05D009265 1.3e-10 69.7 92 52.2
MD17G1207500 Malus domestica HOM05D007863 ORTHO05D009265 1.7e-10 69.3 97 54.6
EL10Ac9g21922 Beta vulgaris HOM05D007863 ORTHO05D009265 2.9e-10 68.6 48 72.9
Psat5g301160 Pisum sativum HOM05D007863 ORTHO05D009265 4.9e-10 67.8 89 47.2
Potri.001G171701 Populus trichocarpa HOM05D007863 ORTHO05D009265 4.9e-10 67.8 96 50.0
THA.LOC104808229 Tarenaya hassleriana HOM05D007863 ORTHO05D009265 8.4e-10 67.0 43 74.4
Rhsim12G0192500 Rhododendron simsii HOM05D007863 ORTHO05D009265 1.9e-09 65.9 54 66.7
AUR62011544 Chenopodium quinoa HOM05D007863 ORTHO05D009265 2.4e-09 65.5 48 70.8
DCAR_025492 Daucus carota HOM05D007863 ORTHO05D009265 2.4e-09 65.5 41 78.0
Migut.I00793 Erythranthe guttata HOM05D007863 ORTHO05D009265 2.4e-09 65.5 48 75.0
Glyma.13G364100 Glycine max HOM05D007863 ORTHO05D009265 2.4e-09 65.5 37 86.5
TPR.G37228 Trifolium pratense HOM05D007863 ORTHO05D009265 2.4e-09 65.5 89 46.1
Lj3g0003830 Lotus japonicus HOM05D007863 ORTHO05D009265 3.2e-09 65.1 83 49.4
Lalb_Chr14g0373721 Lupinus albus HOM05D007863 ORTHO05D009265 3.2e-09 65.1 68 57.4
Medtr2g103440 Medicago truncatula HOM05D007863 ORTHO05D009265 3.2e-09 65.1 56 62.5
Atru.chr1.3052 Acer truncatum HOM05D007863 ORTHO05D009265 5.4e-09 64.3 34 97.1
Glyma.15G009600 Glycine max HOM05D007863 ORTHO05D009265 5.4e-09 64.3 37 83.8
Lj3g0006922 Lotus japonicus HOM05D007863 ORTHO05D009265 9.3e-09 63.5 63 58.7
Manes.11G054000 Manihot esculenta HOM05D007863 ORTHO05D009265 9.3e-09 63.5 42 76.2
SalBow2G0248 Salvia bowleyana HOM05D007863 ORTHO05D009265 9.3e-09 63.5 68 52.9
Medtr4g011030 Medicago truncatula HOM05D007863 ORTHO05D009265 2.7e-08 62.0 42 76.2
Phvul.005G176000 Phaseolus vulgaris HOM05D007863 ORTHO05D009265 2.7e-08 62.0 57 61.4
TPR.G38680 Trifolium pratense HOM05D007863 ORTHO05D009265 2.7e-08 62.0 45 66.7
MBI01_g37813_MAGBIO Magnolia biondii HOM05D007863 ORTHO05D009265 3.5e-08 61.6 39 79.5
Psat7g256040 Pisum sativum HOM05D007863 ORTHO05D009265 7.8e-08 60.5 42 73.8
ClCG09G002780 Citrullus lanatus HOM05D007863 ORTHO05D009265 5.1e-07 57.8 35 77.1
Glyma.07G031800 Glycine max HOM05D007863 ORTHO05D009265 5.1e-07 57.8 59 50.8
Lalb_Chr04g0262451 Lupinus albus HOM05D007863 ORTHO05D009265 5.1e-07 57.8 41 68.3
Sed0015441 Sechium edule HOM05D007863 ORTHO05D009265 6.6e-07 57.4 35 77.1
ATR1156G029 Amborella trichopoda HOM05D007863 ORTHO05D009265 8.7e-07 57.0 37 70.3
Lalb_Chr25g0279481 Lupinus albus HOM05D007863 ORTHO05D009265 8.7e-07 57.0 43 67.4
CsaV3_7G032550 Cucumis sativus L. HOM05D007863 ORTHO05D009265 1.1e-06 56.6 35 74.3
MELO3C023407.2 Cucumis melo HOM05D007863 ORTHO05D009265 1.5e-06 56.2 35 74.3
DCAR_016255 Daucus carota HOM05D007863 ORTHO05D009265 1.5e-06 56.2 61 49.2
Sopen03g035410 Solanum pennellii HOM05D007863 ORTHO05D009265 1.9e-06 55.8 44 61.4
Migut.D01060 Erythranthe guttata HOM05D007863 ORTHO05D009265 2.5e-06 55.5 39 69.2
Sed0016812 Sechium edule HOM05D007863 ORTHO05D009265 2.5e-06 55.5 33 78.8
Aqoxy7G03727 Aquilegia oxysepala HOM05D007863 ORTHO05D009265 9.6e-06 53.5 35 71.4
Glyma.08G211000 Glycine max HOM05D007863 ORTHO05D009265 9.6e-06 53.5 71 45.1


User provided reference genes

Program Settings