Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa001948 Carpinus fangiana HOM05D006506 ORTHO05D007809 1.0e-179 633.3 320 100.0
Haze_13452 Corylus avellana HOM05D006506 ORTHO05D007809 5.7e-178 627.5 320 99.1
CiPaw.01G249400 Carya illinoinensis HOM05D006506 ORTHO05D007809 1.1e-168 596.7 320 93.8
Prupe.3G090200 Prunus persica HOM05D006506 ORTHO05D007809 1.5e-165 586.3 320 91.2
MD17G1214300 Malus domestica HOM05D006506 ORTHO05D007809 4.7e-164 581.3 320 90.3
COL.COLO4_11906 Corchorus olitorius HOM05D006506 ORTHO05D007809 5.7e-162 574.3 320 89.1
Thecc.06G030600 Theobroma cacao HOM05D006506 ORTHO05D007809 1.3e-161 573.2 317 89.3
CsaV3_7G032300 Cucumis sativus L. HOM05D006506 ORTHO05D007809 1.7e-161 572.8 320 89.7
Duzib160G0645 Durio zibethinus HOM05D006506 ORTHO05D007809 2.2e-161 572.4 320 88.1
MELO3C023430.2 Cucumis melo HOM05D006506 ORTHO05D007809 1.1e-160 570.1 320 89.1
Duzib160G0598 Durio zibethinus HOM05D006506 ORTHO05D007809 1.8e-160 569.3 320 87.8
Sed0005275 Sechium edule HOM05D006506 ORTHO05D007809 1.6e-159 566.2 320 87.5
TWI75G0153 Tripterygium wilfordii HOM05D006506 ORTHO05D007809 8.6e-158 560.5 320 85.3
Gohir.D06G120300 Gossypium hirsutum HOM05D006506 ORTHO05D007809 1.1e-157 560.1 320 86.6
Gohir.A06G107700 Gossypium hirsutum HOM05D006506 ORTHO05D007809 2.5e-157 558.9 320 86.2
Gorai.010G138400 Gossypium raimondii HOM05D006506 ORTHO05D007809 4.3e-157 558.1 320 86.2
CANSAT56G2592 Cannabis sativa HOM05D006506 ORTHO05D007809 8.0e-156 553.9 320 86.2
FvH4_6g29440 Fragaria vesca HOM05D006506 ORTHO05D007809 1.8e-155 552.7 320 86.2
FAN05G2665 Fragaria x ananassa HOM05D000001 ORTHO05D007809 6.8e-155 550.8 320 86.2
FAN09G0903 Fragaria x ananassa HOM05D006506 ORTHO05D007809 6.8e-155 550.8 320 86.2
FAN14G4998 Fragaria x ananassa HOM05D000001 ORTHO05D007809 6.8e-155 550.8 320 85.9
Cpa.g.sc67.28 Carica papaya HOM05D006506 ORTHO05D007809 2.0e-154 549.3 320 84.7
FAN02G0099 Fragaria x ananassa HOM05D006506 ORTHO05D007809 2.0e-154 549.3 320 85.6
RcHm_v2.0_Chr2g0134931 Rosa chinensis HOM05D006506 ORTHO05D007809 9.8e-154 547.0 320 85.6
Ciclev10026100m.g Citrus clementina HOM05D006506 ORTHO05D007809 1.3e-153 546.6 319 85.9
Duzib235G0689 Durio zibethinus HOM05D006506 ORTHO05D007809 4.1e-152 541.6 322 84.2
Dinv38132 Davidia involucrata HOM05D006506 ORTHO05D007809 5.4e-152 541.2 328 82.6
GSVIVG01017366001 Vitis vinifera HOM05D006506 ORTHO05D007809 2.3e-150 535.8 323 82.7
Actinidia15748 Actinidia chinensis HOM05D006506 ORTHO05D007809 3.9e-150 535.0 327 80.7
DCAR_021353 Daucus carota HOM05D006506 ORTHO05D007809 1.1e-149 533.5 326 82.5
SHI11239 Sapria himalayana HOM05D006506 ORTHO05D007809 4.3e-149 531.6 322 81.4
arahy.Tifrunner.gnm1.ann1.9QS0XN Arachis hypogaea HOM05D006506 ORTHO05D007809 1.6e-148 529.6 320 80.9
CARHR042650 Cardamine hirsuta HOM05D006506 ORTHO05D007809 2.8e-148 528.9 320 81.9
Carub.0001s4149 Capsella rubella HOM05D006506 ORTHO05D007809 6.2e-148 527.7 320 81.9
AL1G60780 Arabidopsis lyrata HOM05D006506 ORTHO05D007809 8.1e-148 527.3 320 81.6
arahy.Tifrunner.gnm1.ann1.SP1H5F Arachis hypogaea HOM05D006506 ORTHO05D007809 1.1e-147 526.9 320 80.3
BcaB02g10986 Brassica carinata HOM05D006506 ORTHO05D007809 1.1e-147 526.9 320 81.6
Thhalv10011665m.g Eutrema salsugineum HOM05D006506 ORTHO05D007809 1.1e-147 526.9 320 80.9
AT1G52530 Arabidopsis thaliana HOM05D006506 ORTHO05D007809 1.8e-147 526.2 320 80.9
CSS0043074 Camellia sinensis var. sinensis HOM05D006506 ORTHO05D007809 2.3e-147 525.8 327 80.1
Sp1g39080 Schrenkiella parvula HOM05D006506 ORTHO05D007809 2.3e-147 525.8 320 81.2
Aa31LG10G2470 Aethionema arabicum HOM05D006506 ORTHO05D007809 8.9e-147 523.9 320 80.9
CSS0005655 Camellia sinensis var. sinensis HOM05D006506 ORTHO05D007809 8.9e-147 523.9 327 79.8
Potri.001G201700 Populus trichocarpa HOM05D006506 ORTHO05D007809 1.5e-146 523.1 321 82.6
BraA05t20791Z Brassica rapa HOM05D006506 ORTHO05D007809 2.6e-146 522.3 320 80.9
A05p18940 Brassica napus HOM05D006506 ORTHO05D007809 3.4e-146 521.9 320 80.9
Sabra01G0159300 Salix brachista HOM05D006506 ORTHO05D007809 7.5e-146 520.8 322 82.6
ECA232G3059 Erigeron canadensis HOM05D006506 ORTHO05D007809 9.8e-146 520.4 323 79.6
BcaC08g44001 Brassica carinata HOM05D006506 ORTHO05D007809 4.9e-145 518.1 320 80.9
Lj2g0016250 Lotus japonicus HOM05D006506 ORTHO05D007809 4.9e-145 518.1 322 78.6
Peaxi162Scf00553g00510 Petunia axillaris HOM05D006506 ORTHO05D007809 1.1e-144 516.9 328 79.3
C06p14060 Brassica napus HOM05D006506 ORTHO05D007809 1.4e-144 516.5 320 80.6
BolC6t36584H Brassica oleracea HOM05D006506 ORTHO05D007809 1.4e-144 516.5 320 80.6
Rhsim08G0211600 Rhododendron simsii HOM05D006506 ORTHO05D007809 2.4e-144 515.8 327 79.2
Ca_04862_v3 Cicer arietinum L. HOM05D006506 ORTHO05D007809 7.1e-144 514.2 320 77.8
Lsat_1_v5_gn_4_87520 Lactuca sativa HOM05D006506 ORTHO05D007809 1.2e-143 513.5 323 79.9
TAR371G0436 Trochodendron aralioides HOM05D006506 ORTHO05D007809 1.6e-143 513.1 321 79.4
Nitab4.5_0005461g0020 Nicotiana tabacum HOM05D006506 ORTHO05D007809 5.1e-142 508.1 328 77.4
PGSC0003DMG400014148 Solanum tuberosum HOM05D006506 ORTHO05D007809 6.6e-142 507.7 328 75.6
vmacro19011 Vaccinium macrocarpon HOM05D006506 ORTHO05D007809 8.6e-142 507.3 324 78.4
Nitab4.5_0010868g0010 Nicotiana tabacum HOM05D006506 ORTHO05D007809 1.9e-141 506.1 328 77.1
Lalb_Chr06g0175141 Lupinus albus HOM05D006506 ORTHO05D007809 4.3e-141 505.0 326 77.6
TPR.G16552 Trifolium pratense HOM05D006506 ORTHO05D007809 7.3e-141 504.2 320 76.9
HanXRQChr16g0500351 Helianthus annuus HOM05D006506 ORTHO05D007809 1.2e-140 503.4 325 77.8
Medtr1g082730 Medicago truncatula HOM05D006506 ORTHO05D007809 1.2e-140 503.4 320 76.6
Ciclev10027407m.g Citrus clementina HOM05D006506 ORTHO05D007809 2.1e-140 502.7 318 80.8
Sopen03g036430 Solanum pennellii HOM05D006506 ORTHO05D007809 3.6e-140 501.9 328 74.7
CAN.G407.9 Capsicum annuum HOM05D006506 ORTHO05D007809 6.2e-140 501.1 328 75.6
Cc04_g04540 Coffea canephora HOM05D006506 ORTHO05D007809 8.1e-140 500.7 324 76.2
PGR031G2298 Punica granatum HOM05D006506 ORTHO05D007809 4.0e-139 498.4 323 78.3
Psat1g070040 Pisum sativum HOM05D006506 ORTHO05D007809 6.8e-139 497.7 320 76.6
PSO210G7208 Papaver somniferum HOM05D006506 ORTHO05D007809 1.7e-137 493.0 320 75.9
MBI06_g17213_MAGBIO Magnolia biondii HOM05D006506 ORTHO05D007809 3.8e-137 491.9 317 77.0
Phvul.004G032600 Phaseolus vulgaris HOM05D006506 ORTHO05D007809 4.9e-137 491.5 320 75.9
Glyma.13G059800 Glycine max HOM05D006506 ORTHO05D007809 9.2e-136 487.3 320 75.3
Ciclev10026188m.g Citrus clementina HOM05D006506 ORTHO05D007809 6.0e-135 484.6 318 78.9
VMungo0464G1487 Vigna mungo HOM05D006506 ORTHO05D007809 6.0e-135 484.6 321 75.4
Oeu027841.1 Olea europaea HOM05D006506 ORTHO05D007809 1.0e-134 483.8 325 74.8
Ciclev10027493m.g Citrus clementina HOM05D006506 ORTHO05D007809 2.5e-133 479.2 299 82.6
Ciclev10027064m.g Citrus clementina HOM05D006506 ORTHO05D007809 4.7e-132 474.9 299 81.3
MSTRG.11150 Avicennia marina HOM05D006506 ORTHO05D007809 5.4e-128 461.5 320 71.9
Ciclev10027055m.g Citrus clementina HOM05D006506 ORTHO05D007809 2.7e-127 459.1 305 79.0
Solyc03g117530.1 Solanum lycopersicum HOM05D006506 ORTHO05D007809 3.5e-127 458.8 303 73.9
HPP92_007331 Vanilla planifolia HOM05D006506 ORTHO05D007809 2.1e-124 449.5 317 69.4
ATR0605G102 Amborella trichopoda HOM05D006506 ORTHO05D007809 3.1e-123 445.7 320 69.7
SalBow2G1795 Salvia bowleyana HOM05D006506 ORTHO05D007809 9.9e-122 440.7 320 68.4
Manes.11G058300 Manihot esculenta HOM05D006506 ORTHO05D007809 3.8e-121 438.7 258 85.7
unitig_62.g23595 Utricularia gibba HOM05D006506 ORTHO05D007809 6.4e-121 438.0 320 67.8
SGA_v2.0_scaffold37G14756 Striga asiatica HOM05D006506 ORTHO05D007809 8.4e-121 437.6 320 68.1
Aqoxy7G02198 Aquilegia oxysepala HOM05D006506 ORTHO05D007809 2.7e-119 432.6 295 71.5
Migut.I00752 Erythranthe guttata HOM05D006506 ORTHO05D007809 1.6e-116 423.3 320 66.6
THA.LOC104818016 Tarenaya hassleriana HOM05D006506 ORTHO05D007809 1.1e-115 420.6 268 80.2
SEGI_33428 Sequoiadendron giganteum HOM05D006506 ORTHO05D007809 1.1e-112 410.6 319 62.7
Ah.08g214330 Amaranthus hybridus HOM05D006506 ORTHO05D007809 3.0e-110 402.5 318 63.5
Os04g0528400 Oryza sativa ssp. japonica HOM05D006506 ORTHO05D007809 1.9e-109 399.8 326 59.8
AUR62030047 Chenopodium quinoa HOM05D006506 ORTHO05D007809 1.3e-108 397.1 319 63.0
HPP92_007333 Vanilla planifolia HOM05D006506 ORTHO05D007809 1.3e-108 397.1 320 64.1
Ciclev10027054m.g Citrus clementina HOM05D006506 ORTHO05D007809 4.0e-107 392.1 257 80.9
EL10Ac7g17638 Beta vulgaris HOM05D006506 ORTHO05D007809 5.3e-107 391.7 311 63.7
Atru.chr1.2888 Acer truncatum HOM05D006506 ORTHO05D007809 8.4e-105 384.4 229 84.7
AagrBONN_evm.TU.Sc2ySwM_117.4079 Anthoceros agrestis HOM05D006506 ORTHO05D007809 5.7e-101 371.7 315 57.1
AUR62002633 Chenopodium quinoa HOM05D006506 ORTHO05D007809 4.1e-99 365.5 294 63.3
Pp3c1_24880 Physcomitrium patens HOM05D006506 ORTHO05D007809 7.6e-98 361.3 317 56.2
Mapoly0090s0026 Marchantia polymorpha HOM05D006506 ORTHO05D007809 1.8e-94 350.1 320 55.6
Lj9E498T1 Lonicera japonica HOM05D006506 ORTHO05D007809 2.3e-94 349.7 214 81.3
Zm00001eb427100 Zea mays HOM05D006506 ORTHO05D007809 3.3e-93 345.9 327 52.9
Ciclev10027056m.g Citrus clementina HOM05D006506 ORTHO05D007809 1.6e-92 343.6 306 63.1
SMO115G0207 Selaginella moellendorffii HOM05D006506 ORTHO05D007809 6.9e-91 338.2 316 52.5
Sc05g0005410 Simmondsia chinensis HOM05D006506 ORTHO05D007809 8.8e-86 321.2 285 58.2
CBR_g8656 Chara braunii HOM05D006506 ORTHO05D007809 2.6e-85 319.7 321 50.5
CDE11G1201 Ceratophyllum demersum HOM05D006506 ORTHO05D007809 4.1e-83 312.4 287 58.2
CDE08G0717 Ceratophyllum demersum HOM05D006506 ORTHO05D007809 8.2e-76 288.1 214 66.4
Prupe.2G072500 Prunus persica HOM05D006506 ORTHO05D007809 1.4e-70 270.8 297 53.5
TPR.G26194 Trifolium pratense HOM05D002479 ORTHO05D007809 9.5e-48 194.9 161 64.6
Solyc04g026070.1 Solanum lycopersicum HOM05D006506 ORTHO05D007809 1.8e-38 164.1 121 65.3
Ciclev10027644m.g Citrus clementina HOM05D006506 ORTHO05D007809 4.6e-34 149.4 100 75.0
Cre12.g524350 Chlamydomonas reinhardtii HOM05D006506 ORTHO05D007809 1.8e-30 137.5 269 35.7
ATR0068G037 Amborella trichopoda HOM05D006506 ORTHO05D007809 5.2e-30 136.0 116 58.6
SMO018G0003 Selaginella moellendorffii HOM05D006506 ORTHO05D007809 8.3e-28 128.6 112 56.2
Ciclev10026990m.g Citrus clementina HOM05D006506 ORTHO05D007809 2.4e-27 127.1 100 69.0
Solyc08g044480.1 Solanum lycopersicum HOM05D006506 ORTHO05D007809 2.3e-25 120.6 115 53.0
PRCOL_00003381 Prasinoderma coloniale HOM05D006506 ORTHO05D007809 6.6e-25 119.0 366 29.2
Nn4g24996 Nelumbo nucifera HOM05D006506 ORTHO05D007809 2.5e-24 117.1 62 87.1
MBI08_g32097_MAGBIO Magnolia biondii HOM05D006506 ORTHO05D007809 4.0e-22 109.8 72 76.4
MCO05G139 Micromonas commoda HOM05D006506 ORTHO05D007809 6.0e-18 95.9 304 27.0
Mapoly1721s0002 Marchantia polymorpha HOM05D006506 ORTHO05D007809 1.4e-14 84.7 62 62.9


User provided reference genes

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