Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa001926 Carpinus fangiana HOM05D000840 ORTHO05D000670 1.1e-44 183.0 97 100.0
Haze_16618 Corylus avellana HOM05D000840 ORTHO05D000670 1.6e-38 162.5 100 90.0
Cfa001922 Carpinus fangiana HOM05D000840 ORTHO05D000670 9.9e-33 143.3 82 92.7
Cfa001923 Carpinus fangiana HOM05D000840 ORTHO05D000670 3.5e-30 134.8 78 89.7
Haze_16616 Corylus avellana HOM05D000840 ORTHO05D000670 2.3e-29 132.1 81 86.4
Haze_16613 Corylus avellana HOM05D000840 ORTHO05D000670 1.3e-16 89.7 79 65.8
Cfa001928 Carpinus fangiana HOM05D000840 ORTHO05D000670 3.8e-16 88.2 79 64.6
Gorai.009G126200 Gossypium raimondii HOM05D000840 ORTHO05D000670 1.9e-15 85.9 102 51.0
Gohir.D05G122700 Gossypium hirsutum HOM05D000840 ORTHO05D000670 2.5e-15 85.5 94 54.3
Gohir.A05G121700 Gossypium hirsutum HOM05D000840 ORTHO05D000670 3.2e-15 85.1 102 50.0
CiPaw.02G159300 Carya illinoinensis HOM05D000840 ORTHO05D000670 7.1e-15 84.0 79 60.8
CiPaw.02G159400 Carya illinoinensis HOM05D000840 ORTHO05D000670 1.2e-14 83.2 79 60.8
Thecc.06G034100 Theobroma cacao HOM05D000840 ORTHO05D000670 1.2e-14 83.2 94 53.2
Thecc.06G034400 Theobroma cacao HOM05D000840 ORTHO05D000670 2.7e-14 82.0 94 52.1
Gohir.A10G072300 Gossypium hirsutum HOM05D000840 ORTHO05D000670 4.6e-14 81.3 80 57.5
Gohir.D10G078800 Gossypium hirsutum HOM05D000840 ORTHO05D000670 4.6e-14 81.3 80 57.5
MD11G1036600 Malus domestica HOM05D000840 ORTHO05D000670 7.9e-14 80.5 80 56.2
Gorai.011G085600 Gossypium raimondii HOM05D000840 ORTHO05D000670 2.3e-13 79.0 80 56.2
FvH4_3g42370 Fragaria vesca HOM05D000840 ORTHO05D000670 3.0e-13 78.6 81 55.6
FAN11G2882 Fragaria x ananassa HOM05D000840 ORTHO05D000670 3.0e-13 78.6 81 55.6
FAN28G2945 Fragaria x ananassa HOM05D000840 ORTHO05D000670 3.0e-13 78.6 81 55.6
Atru.chr4.1644_Atru.chr4.1657 Acer truncatum HOM05D000840 ORTHO05D000670 3.9e-13 78.2 75 58.7
RcHm_v2.0_Chr5g0075871 Rosa chinensis HOM05D000840 ORTHO05D000670 6.7e-13 77.4 81 55.6
COL.COLO4_11847 Corchorus olitorius HOM05D000840 ORTHO05D000670 8.7e-13 77.0 75 57.3
Duzib235G0104 Durio zibethinus HOM05D000840 ORTHO05D000670 8.7e-13 77.0 79 55.7
FAN25G1451 Fragaria x ananassa HOM05D000840 ORTHO05D000670 1.9e-12 75.9 80 53.8
MD03G1032700 Malus domestica HOM05D000840 ORTHO05D000670 2.5e-12 75.5 80 53.8
Ciclev10024717m.g Citrus clementina HOM05D000840 ORTHO05D000670 1.3e-11 73.2 74 58.1
FAN16G1995 Fragaria x ananassa HOM05D000840 ORTHO05D000670 1.6e-11 72.8 74 56.8
QL05p033046 Quercus lobata HOM05D000840 ORTHO05D000670 2.2e-11 72.4 78 55.1
Sabra03G0016100 Salix brachista HOM05D000840 ORTHO05D000670 2.2e-11 72.4 73 56.2
Manes.11G061900 Manihot esculenta HOM05D000840 ORTHO05D000670 2.8e-11 72.0 71 59.2
Dinv31533 Davidia involucrata HOM05D000840 ORTHO05D000670 4.8e-11 71.2 87 50.6
Gohir.A05G121650 Gossypium hirsutum HOM05D000840 ORTHO05D000670 6.3e-11 70.9 78 51.3
Potri.001G204900 Populus trichocarpa HOM05D000840 ORTHO05D000670 8.2e-11 70.5 73 56.2
Sabra03G0015900 Salix brachista HOM05D000840 ORTHO05D000670 8.2e-11 70.5 72 55.6
MD03G1033400 Malus domestica HOM05D000840 ORTHO05D000670 1.1e-10 70.1 80 52.5
MD03G1033800 Malus domestica HOM05D000840 ORTHO05D000670 1.8e-10 69.3 80 52.5
GSVIVG01027201001 Vitis vinifera HOM05D000840 ORTHO05D000670 1.8e-10 69.3 69 59.4
Glyma.07G027800 Glycine max HOM05D000840 ORTHO05D000670 2.4e-10 68.9 73 54.8
TAR633G2034 Trochodendron aralioides HOM05D000840 ORTHO05D000670 2.4e-10 68.9 92 50.0
CANSAT56G3623 Cannabis sativa HOM05D000840 ORTHO05D000670 4.1e-10 68.2 83 51.8
MD03G1033000 Malus domestica HOM05D000840 ORTHO05D000670 4.1e-10 68.2 80 50.0
Actinidia01522 Actinidia chinensis HOM05D000840 ORTHO05D000670 6.9e-10 67.4 80 52.5
Potri.003G013000 Populus trichocarpa HOM05D000840 ORTHO05D000670 1.2e-09 66.6 84 46.4
Lalb_Chr24g0395381 Lupinus albus HOM05D000840 ORTHO05D000670 1.5e-09 66.2 73 53.4
Manes.04G107400 Manihot esculenta HOM05D000840 ORTHO05D000670 2.0e-09 65.9 70 54.3
Medtr2g104400 Medicago truncatula HOM05D000840 ORTHO05D000670 2.0e-09 65.9 81 50.6
Cpa.g.sc14.207 Carica papaya HOM05D000840 ORTHO05D000670 2.6e-09 65.5 79 51.9
Phvul.010G157900 Phaseolus vulgaris HOM05D000840 ORTHO05D000670 3.4e-09 65.1 72 54.2
Rhsim01G0122800 Rhododendron simsii HOM05D000840 ORTHO05D000670 3.4e-09 65.1 77 54.5
Eucgr.J00090 Eucalyptus grandis HOM05D000840 ORTHO05D000670 4.5e-09 64.7 79 50.6
Lalb_Chr25g0279141 Lupinus albus HOM05D000840 ORTHO05D000670 4.5e-09 64.7 73 50.7
Potri.003G028401 Populus trichocarpa HOM05D000840 ORTHO05D000670 4.5e-09 64.7 75 49.3
Duzib235G1450 Durio zibethinus HOM05D000840 ORTHO05D000670 7.6e-09 63.9 79 50.6
Rhsim01G0123000 Rhododendron simsii HOM05D000840 ORTHO05D000670 7.6e-09 63.9 77 53.2
TPR.G37212 Trifolium pratense HOM05D000840 ORTHO05D000670 7.6e-09 63.9 75 53.3
Cpa.g.sc10.131 Carica papaya HOM05D000840 ORTHO05D000670 1.0e-08 63.5 73 53.4
TPR.G19143 Trifolium pratense HOM05D000840 ORTHO05D000670 1.7e-08 62.8 81 50.6
Actinidia01692 Actinidia chinensis HOM05D000840 ORTHO05D000670 2.2e-08 62.4 80 50.0
RcHm_v2.0_Chr5g0075841 Rosa chinensis HOM05D000840 ORTHO05D000670 2.2e-08 62.4 105 40.0
QL05p033135 Quercus lobata HOM05D000840 ORTHO05D000670 2.9e-08 62.0 78 50.0
Rhsim01G0071500 Rhododendron simsii HOM05D000840 ORTHO05D000670 2.9e-08 62.0 77 53.2
Rhsim01G0072100 Rhododendron simsii HOM05D000840 ORTHO05D000670 2.9e-08 62.0 77 53.2
arahy.Tifrunner.gnm1.ann1.40JDZM Arachis hypogaea HOM05D000840 ORTHO05D000670 3.8e-08 61.6 75 48.0
FAN21G2894 Fragaria x ananassa HOM05D000840 ORTHO05D000670 5.0e-08 61.2 68 54.4
DCAR_003830 Daucus carota HOM05D000840 ORTHO05D000670 6.5e-08 60.8 87 47.1
Glyma.08G214900 Glycine max HOM05D000840 ORTHO05D000670 6.5e-08 60.8 74 50.0
Oeu012484.1 Olea europaea HOM05D000840 ORTHO05D000670 6.5e-08 60.8 83 45.8
Eucgr.E03533 Eucalyptus grandis HOM05D000840 ORTHO05D000670 8.5e-08 60.5 88 45.5
Lalb_Chr04g0262271 Lupinus albus HOM05D000840 ORTHO05D000670 8.5e-08 60.5 73 46.6
arahy.Tifrunner.gnm1.ann1.PEC4AR Arachis hypogaea HOM05D000840 ORTHO05D000670 1.1e-07 60.1 75 48.0
Sc14g0004830 Simmondsia chinensis HOM05D000840 ORTHO05D000670 1.1e-07 60.1 76 51.3
VMungo0331G0091 Vigna mungo HOM05D000840 ORTHO05D000670 1.1e-07 60.1 74 50.0
Dinv31992 Davidia involucrata HOM05D000840 ORTHO05D000670 1.4e-07 59.7 83 48.2
Psat5g304200 Pisum sativum HOM05D000840 ORTHO05D000670 1.9e-07 59.3 73 49.3
Potri.003G013300 Populus trichocarpa HOM05D000840 ORTHO05D000670 1.9e-07 59.3 84 45.2
Prupe.6G027900 Prunus persica HOM05D000840 ORTHO05D000670 1.9e-07 59.3 74 50.0
CiPaw.01G251200 Carya illinoinensis HOM05D000840 ORTHO05D000670 2.5e-07 58.9 51 66.7
Lj3g0027916 Lotus japonicus HOM05D000840 ORTHO05D000670 2.5e-07 58.9 80 48.8
Ca_20456_v3 Cicer arietinum L. HOM05D000840 ORTHO05D000670 3.2e-07 58.5 77 49.4
MD03G1034600 Malus domestica HOM05D000840 ORTHO05D000670 3.2e-07 58.5 74 50.0
Phvul.005G180200 Phaseolus vulgaris HOM05D000840 ORTHO05D000670 4.2e-07 58.2 73 50.7
Eucgr.A00861 Eucalyptus grandis HOM05D000840 ORTHO05D000670 5.5e-07 57.8 86 43.0
Glyma.13G367700 Glycine max HOM05D000840 ORTHO05D000670 7.2e-07 57.4 73 52.1
VMungo1080G0802 Vigna mungo HOM05D000840 ORTHO05D000670 7.2e-07 57.4 73 49.3
Lj3g0024586 Lotus japonicus HOM05D000840 ORTHO05D000670 1.2e-06 56.6 72 51.4
MSTRG.20450 Avicennia marina HOM05D000840 ORTHO05D000670 1.6e-06 56.2 72 50.0
FAN16G3492 Fragaria x ananassa HOM05D000840 ORTHO05D000670 1.6e-06 56.2 78 50.0
Prupe.6G027500 Prunus persica HOM05D000840 ORTHO05D000670 1.6e-06 56.2 43 67.4
TPR.G38700 Trifolium pratense HOM05D000840 ORTHO05D000670 1.6e-06 56.2 75 46.7
Lalb_Chr01g0012231 Lupinus albus HOM05D000840 ORTHO05D000670 2.7e-06 55.5 73 45.2
FvH4_3g42361 Fragaria vesca HOM05D000840 ORTHO05D000670 3.6e-06 55.1 78 50.0
Glyma.15G005500 Glycine max HOM05D000840 ORTHO05D000670 3.6e-06 55.1 73 49.3
Oeu027053.1 Olea europaea HOM05D000840 ORTHO05D000670 3.6e-06 55.1 82 43.9
TWI75G0929 Tripterygium wilfordii HOM05D000840 ORTHO05D000670 4.6e-06 54.7 79 50.6
arahy.Tifrunner.gnm1.ann1.E5CV98 Arachis hypogaea HOM05D000840 ORTHO05D000670 7.9e-06 53.9 70 50.0
AUR62032561 Chenopodium quinoa HOM05D000840 ORTHO05D000670 7.9e-06 53.9 76 48.7
Lj7C492G1 Lonicera japonica HOM05D000840 ORTHO05D000670 7.9e-06 53.9 74 45.9
Rhsim01G0143500 Rhododendron simsii HOM05D000840 ORTHO05D000670 7.9e-06 53.9 77 48.1


User provided reference genes

Program Settings