Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa001924 Carpinus fangiana HOM05D015741 ORTHO05D020359 1.1e-187 659.8 325 100.0
Cfa013053 Carpinus fangiana HOM05D015741 ORTHO05D020359 6.2e-156 554.3 321 85.7
Cfa019984 Carpinus fangiana HOM05D015741 ORTHO05D020359 1.2e-130 470.3 321 76.9
Cfa001696 Carpinus fangiana HOM05D015741 ORTHO05D020359 1.8e-107 393.3 321 66.7
Cfa002126 Carpinus fangiana HOM05D015741 ORTHO05D020359 7.6e-45 185.3 326 36.8
Cfa015161 Carpinus fangiana HOM05D015741 ORTHO05D020359 2.2e-36 157.1 244 41.8
Cfa015132 Carpinus fangiana HOM05D015741 ORTHO05D020359 4.1e-30 136.3 166 45.8
Cfa010372 Carpinus fangiana HOM05D036278 ORTHO05D028604 4.2e-19 99.8 344 27.3
PGR119G1784 Punica granatum HOM05D003171 ORTHO05D000037 2.7e-10 70.5 298 23.8
Dinv02799 Davidia involucrata HOM05D000665 ORTHO05D000921 4.7e-10 69.7 228 26.8
RcHm_v2.0_Chr1g0354771 Rosa chinensis HOM05D003171 ORTHO05D000921 1.0e-09 68.6 297 24.9
Lj4A464T6 Lonicera japonica HOM05D008338 ORTHO05D000921 1.4e-09 68.2 155 32.9
Dinv39109 Davidia involucrata HOM05D000665 ORTHO05D000921 3.0e-09 67.0 131 32.1
Dinv43770 Davidia involucrata HOM05D000665 ORTHO05D000921 2.0e-08 64.3 189 29.6
Dinv32776 Davidia involucrata HOM05D007209 ORTHO05D000921 2.6e-08 63.9 186 28.0
TWI38G2389 Tripterygium wilfordii HOM05D003171 ORTHO05D000921 4.4e-08 63.2 307 24.4
TAR080G0001 Trochodendron aralioides HOM05D000034 ORTHO05D000037 5.7e-08 62.8 235 28.5
Gorai.006G053700 Gossypium raimondii HOM05D000034 ORTHO05D000277 9.7e-08 62.0 160 28.1
Lj3A995G65 Lonicera japonica HOM05D008338 ORTHO05D000921 9.7e-08 62.0 155 31.0
PSO700G0266 Papaver somniferum HOM05D003171 ORTHO05D000921 1.3e-07 61.6 305 24.3
Dinv44163 Davidia involucrata HOM05D007209 ORTHO05D000921 1.7e-07 61.2 127 31.5
Hma1.2p1_0309F.1_g120595 Hydrangea macrophylla HOM05D007209 ORTHO05D000921 1.7e-07 61.2 231 26.8
Hma1.2p1_0805F.1_g221293 Hydrangea macrophylla HOM05D007209 ORTHO05D000921 2.2e-07 60.8 256 25.4
Hma1.2p1_0805F.1_g221299 Hydrangea macrophylla HOM05D007209 ORTHO05D000921 2.2e-07 60.8 256 25.4
Dinv20825 Davidia involucrata HOM05D007209 ORTHO05D000921 3.7e-07 60.1 135 29.6
Dinv26864 Davidia involucrata HOM05D000665 ORTHO05D000140 3.7e-07 60.1 243 25.1
ECA240G4363 Erigeron canadensis HOM05D000665 ORTHO05D000140 4.8e-07 59.7 90 37.8
PSO170G3394 Papaver somniferum HOM05D003171 ORTHO05D000921 4.8e-07 59.7 258 24.4
CiPaw.01G106700 Carya illinoinensis HOM05D003171 ORTHO05D000921 6.3e-07 59.3 103 35.0
PSO384G2875 Papaver somniferum HOM05D000665 ORTHO05D003147 6.3e-07 59.3 150 31.3
PSO724G0339 Papaver somniferum HOM05D003171 ORTHO05D000921 6.3e-07 59.3 305 24.3
ECA233G5535 Erigeron canadensis HOM05D005131 ORTHO05D006645 8.2e-07 58.9 232 25.0
QL09p025174 Quercus lobata HOM05D003171 ORTHO05D000921 8.2e-07 58.9 303 24.1
CiPaw.14G058600 Carya illinoinensis HOM05D003171 ORTHO05D000921 1.1e-06 58.5 103 34.0
ECA247G0616 Erigeron canadensis HOM05D000034 ORTHO05D000277 1.1e-06 58.5 90 34.4
Eucgr.L02923 Eucalyptus grandis HOM05D000665 ORTHO05D000285 1.1e-06 58.5 247 25.9
QL05p040133 Quercus lobata HOM05D003171 ORTHO05D000921 1.1e-06 58.5 303 24.4
QL05p062248 Quercus lobata HOM05D003171 ORTHO05D000921 1.1e-06 58.5 303 24.1
Eucgr.H04051 Eucalyptus grandis HOM05D000665 ORTHO05D000285 1.8e-06 57.8 259 25.9
Glyma.15G177200 Glycine max HOM05D003171 ORTHO05D000921 1.8e-06 57.8 311 24.4
Gorai.002G217500 Gossypium raimondii HOM05D000034 ORTHO05D000277 2.4e-06 57.4 244 24.6
MBI16_g21181_MAGBIO Magnolia biondii HOM05D004236 ORTHO05D004903 2.4e-06 57.4 175 29.7
PSO716G0001 Papaver somniferum HOM05D000665 ORTHO05D003147 2.4e-06 57.4 151 31.1
QL02p070399 Quercus lobata HOM05D003171 ORTHO05D000921 2.4e-06 57.4 303 24.1
QL09p032434 Quercus lobata HOM05D003171 ORTHO05D000921 2.4e-06 57.4 303 24.1
MBI02_g29705_MAGBIO Magnolia biondii HOM05D000034 ORTHO05D000140 3.1e-06 57.0 175 29.7
QL10p053818 Quercus lobata HOM05D003171 ORTHO05D000921 3.1e-06 57.0 303 23.8
Eucgr.L02702 Eucalyptus grandis HOM05D000665 ORTHO05D000285 4.1e-06 56.6 171 29.8
Gorai.009G418500 Gossypium raimondii HOM05D000034 ORTHO05D000277 4.1e-06 56.6 315 22.9
Gorai.013G119800 Gossypium raimondii HOM05D000034 ORTHO05D000277 4.1e-06 56.6 261 24.5
PSO170G2007 Papaver somniferum HOM05D000665 ORTHO05D003147 4.1e-06 56.6 151 31.1
QL07p023043 Quercus lobata HOM05D003171 ORTHO05D000921 4.1e-06 56.6 158 28.5
Haze_02167 Corylus avellana HOM05D000665 ORTHO05D000140 5.3e-06 56.2 181 27.6
CANSAT01G1895 Cannabis sativa HOM05D003171 ORTHO05D000921 7.0e-06 55.8 164 29.3
CANSAT25G2398 Cannabis sativa HOM05D000665 ORTHO05D000921 7.0e-06 55.8 164 29.3
Eucgr.B02784 Eucalyptus grandis HOM05D000665 ORTHO05D000285 7.0e-06 55.8 298 23.2
Lj7A726T26 Lonicera japonica HOM05D008338 ORTHO05D000921 7.0e-06 55.8 194 25.3
PSO541G6499 Papaver somniferum HOM05D000665 ORTHO05D003147 7.0e-06 55.8 151 30.5
Dinv33374 Davidia involucrata HOM05D008473 ORTHO05D000921 9.1e-06 55.5 109 33.9
ECA240G3965 Erigeron canadensis HOM05D000004 ORTHO05D000002 9.1e-06 55.5 176 27.8
Eucgr.L00423 Eucalyptus grandis HOM05D000665 ORTHO05D000285 9.1e-06 55.5 300 24.3


User provided reference genes

Program Settings