Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa001865 Carpinus fangiana HOM05D000021 ORTHO05D000010 5.8e-46 187.2 94 100.0
ClCG10G012860 Citrullus lanatus HOM05D000021 ORTHO05D000010 1.5e-17 92.8 97 59.8
COL.COLO4_26763 Corchorus olitorius HOM05D000021 ORTHO05D000010 5.7e-17 90.9 104 56.7
SalBow7G1188 Salvia bowleyana HOM05D000021 ORTHO05D000010 1.6e-16 89.4 96 58.3
CiPaw.01G256200 Carya illinoinensis HOM05D000021 ORTHO05D000010 1.8e-15 85.9 159 40.9
Ciclev10027227m.g Citrus clementina HOM05D000021 ORTHO05D000010 1.2e-14 83.2 159 40.3
Lj9A491G79 Lonicera japonica HOM05D000021 ORTHO05D000010 1.2e-14 83.2 117 49.6
CiPaw.02G163300 Carya illinoinensis HOM05D000021 ORTHO05D000010 2.0e-14 82.4 159 39.0
Dinv23271 Davidia involucrata HOM05D000021 ORTHO05D000010 2.0e-14 82.4 160 41.2
Duzib235G0169 Durio zibethinus HOM05D000021 ORTHO05D000010 2.0e-14 82.4 129 45.7
Duzib235G0901 Durio zibethinus HOM05D000021 ORTHO05D000010 2.0e-14 82.4 118 47.5
Duzib192G0383 Durio zibethinus HOM05D000021 ORTHO05D000010 4.5e-14 81.3 161 39.8
TWI12G0143 Tripterygium wilfordii HOM05D000021 ORTHO05D000010 1.0e-13 80.1 128 43.8
Duzib235G0178 Durio zibethinus HOM05D000021 ORTHO05D000010 1.3e-13 79.7 119 48.7
QL05p036804 Quercus lobata HOM05D000021 ORTHO05D000010 1.7e-13 79.3 159 39.6
Nn8g40010 Nelumbo nucifera HOM05D000021 ORTHO05D000010 2.2e-13 79.0 159 38.4
Potri.003G184100 Populus trichocarpa HOM05D000021 ORTHO05D000010 2.2e-13 79.0 154 39.6
Actinidia08938 Actinidia chinensis HOM05D000021 ORTHO05D000010 3.8e-13 78.2 160 38.1
TAR383G0089 Trochodendron aralioides HOM05D000021 ORTHO05D000010 3.8e-13 78.2 160 40.0
PGR102G2698 Punica granatum HOM05D000021 ORTHO05D000010 6.5e-13 77.4 160 39.4
Potri.001G042500 Populus trichocarpa HOM05D000021 ORTHO05D000010 1.1e-12 76.6 160 38.8
Prupe.3G102400 Prunus persica HOM05D000021 ORTHO05D000010 1.1e-12 76.6 159 38.4
vmacro16843 Vaccinium macrocarpon HOM05D000021 ORTHO05D000010 1.4e-12 76.3 161 38.5
Eucgr.F03981 Eucalyptus grandis HOM05D000021 ORTHO05D000010 2.5e-12 75.5 154 39.6
MD17G1226200 Malus domestica HOM05D000021 ORTHO05D000010 4.2e-12 74.7 153 38.6
Cfa001863 Carpinus fangiana HOM05D000021 ORTHO05D000010 7.2e-12 73.9 65 61.5
Oeu051565.1 Olea europaea HOM05D000021 ORTHO05D000010 9.4e-12 73.6 160 36.9
TAR626G0468 Trochodendron aralioides HOM05D000021 ORTHO05D000010 1.2e-11 73.2 160 38.8
DCAR_025549 Daucus carota HOM05D000021 ORTHO05D000010 1.6e-11 72.8 160 36.2
Cfa001864 Carpinus fangiana HOM05D000021 ORTHO05D000010 2.1e-11 72.4 64 62.5
Rhsim12G0185600 Rhododendron simsii HOM05D000021 ORTHO05D000010 2.1e-11 72.4 161 37.3
CANSAT78G2388 Cannabis sativa HOM05D000021 ORTHO05D000010 2.7e-11 72.0 162 37.7
Haze_16684 Corylus avellana HOM05D000021 ORTHO05D000010 3.6e-11 71.6 63 63.5
FvH4_6g28380 Fragaria vesca HOM05D000021 ORTHO05D000010 7.9e-11 70.5 158 38.0
FAN14G2192 Fragaria x ananassa HOM05D000021 ORTHO05D000010 7.9e-11 70.5 158 38.0
Actinidia36868 Actinidia chinensis HOM05D000021 ORTHO05D000010 1.4e-10 69.7 160 36.2
RcHm_v2.0_Chr2g0132491 Rosa chinensis HOM05D000021 ORTHO05D000010 1.4e-10 69.7 156 36.5
Aqoxy7G02388 Aquilegia oxysepala HOM05D000021 ORTHO05D000010 1.8e-10 69.3 160 36.2
TAR531G0002 Trochodendron aralioides HOM05D000021 ORTHO05D000010 1.8e-10 69.3 147 38.8
FAN05G5679 Fragaria x ananassa HOM05D000021 ORTHO05D000010 2.3e-10 68.9 157 37.6
FAN09G0830 Fragaria x ananassa HOM05D000021 ORTHO05D000010 2.3e-10 68.9 157 37.6
FAN09G2029 Fragaria x ananassa HOM05D000021 ORTHO05D000010 2.3e-10 68.9 157 37.6
Thecc.06G045500 Theobroma cacao HOM05D000021 ORTHO05D000010 3.0e-10 68.6 161 37.3
CsaV3_3G032700 Cucumis sativus L. HOM05D000021 ORTHO05D000010 1.1e-09 66.6 161 37.3
Migut.I00681 Erythranthe guttata HOM05D000021 ORTHO05D000010 1.1e-09 66.6 154 35.1
HanXRQChr02g0033651 Helianthus annuus HOM05D000021 ORTHO05D000010 2.0e-09 65.9 158 34.8
TAR625G0685 Trochodendron aralioides HOM05D000021 ORTHO05D000010 2.5e-09 65.5 147 36.1
Manes.11G067400 Manihot esculenta HOM05D000021 ORTHO05D000010 4.3e-09 64.7 60 60.0
Sabra03G0134600 Salix brachista HOM05D000021 ORTHO05D000010 4.3e-09 64.7 89 50.6
MELO3C026730.2 Cucumis melo HOM05D000021 ORTHO05D000010 5.7e-09 64.3 161 36.6
Os09g0423200 Oryza sativa ssp. japonica HOM05D000021 ORTHO05D000010 7.4e-09 63.9 63 50.8
Zm00001eb099720 Zea mays HOM05D000021 ORTHO05D000010 7.4e-09 63.9 59 54.2
Atru.chr1.2796 Acer truncatum HOM05D000021 ORTHO05D000010 1.7e-08 62.8 147 34.7
Gorai.010G136200 Gossypium raimondii HOM05D000021 ORTHO05D000010 1.7e-08 62.8 161 34.8
Lsat_1_v5_gn_1_30780 Lactuca sativa HOM05D000021 ORTHO05D000010 1.7e-08 62.8 153 34.0
ECA247G3864 Erigeron canadensis HOM05D000021 ORTHO05D000010 2.2e-08 62.4 159 35.2
DCAR_016313 Daucus carota HOM05D000021 ORTHO05D000010 2.8e-08 62.0 149 33.6
Gohir.A06G114300 Gossypium hirsutum HOM05D000021 ORTHO05D000010 2.8e-08 62.0 161 34.8
Cc04_g05260 Coffea canephora HOM05D000021 ORTHO05D000010 3.7e-08 61.6 59 59.3
SalBow7G3347 Salvia bowleyana HOM05D000021 ORTHO05D000010 4.8e-08 61.2 65 55.4
Cpa.g.sc602.1 Carica papaya HOM05D000021 ORTHO05D000010 6.3e-08 60.8 61 54.1
ECA247G0667 Erigeron canadensis HOM05D000021 ORTHO05D000010 8.2e-08 60.5 64 56.2
Rhsim12G0184900 Rhododendron simsii HOM05D000021 ORTHO05D000010 8.2e-08 60.5 63 54.0
Sed0007486 Sechium edule HOM05D000021 ORTHO05D000010 8.2e-08 60.5 67 56.7
VMungo1080G1624 Vigna mungo HOM05D000021 ORTHO05D000010 1.1e-07 60.1 159 34.6
Zm00001eb313280 Zea mays HOM05D000021 ORTHO05D000010 1.4e-07 59.7 149 31.5
Gohir.A10G000400 Gossypium hirsutum HOM05D000021 ORTHO05D000010 2.4e-07 58.9 64 54.7
Gohir.D10G000500 Gossypium hirsutum HOM05D000021 ORTHO05D000010 2.4e-07 58.9 64 54.7
ATR0739G102 Amborella trichopoda HOM05D000021 ORTHO05D000010 3.1e-07 58.5 69 49.3
Gorai.011G000900 Gossypium raimondii HOM05D000021 ORTHO05D000010 6.9e-07 57.4 64 53.1
Rhsim12G0186000 Rhododendron simsii HOM05D000021 ORTHO05D000010 6.9e-07 57.4 55 58.2
Phvul.005G183300 Phaseolus vulgaris HOM05D000021 ORTHO05D000010 9.1e-07 57.0 159 33.3
Glyma.13G371200 Glycine max HOM05D000021 ORTHO05D000010 1.2e-06 56.6 63 54.0
vmacro16845 Vaccinium macrocarpon HOM05D000021 ORTHO05D000010 2.0e-06 55.8 63 52.4
Aqoxy7G03351 Aquilegia oxysepala HOM05D000021 ORTHO05D000010 4.5e-06 54.7 64 43.8
Rhsim12G0185000 Rhododendron simsii HOM05D000021 ORTHO05D000010 5.9e-06 54.3 55 56.4
PSO782G3384 Papaver somniferum HOM05D000021 ORTHO05D000010 7.7e-06 53.9 77 46.8


User provided reference genes

Program Settings