Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa001696 Carpinus fangiana HOM05D015741 ORTHO05D020359 5.3e-133 477.6 233 100.0
Cfa001924 Carpinus fangiana HOM05D015741 ORTHO05D020359 5.0e-107 391.3 321 66.7
Cfa013053 Carpinus fangiana HOM05D015741 ORTHO05D020359 4.3e-106 388.3 312 66.3
Cfa019984 Carpinus fangiana HOM05D015741 ORTHO05D020359 9.8e-87 323.9 289 63.3
Cfa002126 Carpinus fangiana HOM05D015741 ORTHO05D020359 5.7e-42 175.3 242 42.1
Cfa015132 Carpinus fangiana HOM05D015741 ORTHO05D020359 7.7e-23 111.7 164 40.9
Cfa015161 Carpinus fangiana HOM05D015741 ORTHO05D020359 5.5e-21 105.5 160 43.8
HanXRQChr03g0084731 Helianthus annuus HOM05D000665 ORTHO05D000140 4.4e-10 69.3 207 26.6
Dinv20825 Davidia involucrata HOM05D007209 ORTHO05D000921 2.2e-09 67.0 191 26.7
Dinv32776 Davidia involucrata HOM05D007209 ORTHO05D000921 2.2e-09 67.0 191 27.2
Dinv43770 Davidia involucrata HOM05D000665 ORTHO05D000921 2.2e-09 67.0 138 29.7
Dinv39109 Davidia involucrata HOM05D000665 ORTHO05D000921 6.3e-09 65.5 122 32.0
Dinv02799 Davidia involucrata HOM05D000665 ORTHO05D000921 8.2e-09 65.1 122 32.0
Hma1.2p1_0805F.1_g221293 Hydrangea macrophylla HOM05D007209 ORTHO05D000921 8.2e-09 65.1 147 32.7
Hma1.2p1_0805F.1_g221299 Hydrangea macrophylla HOM05D007209 ORTHO05D000921 8.2e-09 65.1 147 32.7
QL02p018541 Quercus lobata HOM05D000665 ORTHO05D000140 1.8e-08 63.9 104 33.7
Rhsim12G0067000 Rhododendron simsii HOM05D000034 ORTHO05D000037 2.4e-08 63.5 105 37.1
Eucgr.H04051 Eucalyptus grandis HOM05D000665 ORTHO05D000285 3.1e-08 63.2 131 31.3
Hma1.2p1_0309F.1_g120595 Hydrangea macrophylla HOM05D007209 ORTHO05D000921 3.1e-08 63.2 147 33.3
Manes.16G131100 Manihot esculenta HOM05D000665 ORTHO05D000140 3.1e-08 63.2 103 32.0
Cfa010372 Carpinus fangiana HOM05D036278 ORTHO05D028604 7.0e-08 62.0 177 28.8
Dinv26864 Davidia involucrata HOM05D000665 ORTHO05D000140 7.0e-08 62.0 237 25.3
AUR62040593 Chenopodium quinoa HOM05D007209 ORTHO05D000921 9.1e-08 61.6 95 34.7
Lsat_1_v5_gn_6_77601 Lactuca sativa HOM05D000665 ORTHO05D000140 9.1e-08 61.6 232 22.0
Lj4A464T6 Lonicera japonica HOM05D008338 ORTHO05D000921 9.1e-08 61.6 97 38.1
CiPaw.01G106700 Carya illinoinensis HOM05D003171 ORTHO05D000921 1.2e-07 61.2 98 34.7
PSO170G3394 Papaver somniferum HOM05D003171 ORTHO05D000921 2.0e-07 60.5 145 29.0
PSO700G0266 Papaver somniferum HOM05D003171 ORTHO05D000921 2.0e-07 60.5 145 29.0
CiPaw.14G058600 Carya illinoinensis HOM05D003171 ORTHO05D000921 2.7e-07 60.1 93 35.5
Dinv44163 Davidia involucrata HOM05D007209 ORTHO05D000921 2.7e-07 60.1 116 31.0
CiPaw.07G231300 Carya illinoinensis HOM05D000665 ORTHO05D000140 3.5e-07 59.7 104 31.7
ECA240G4363 Erigeron canadensis HOM05D000665 ORTHO05D000140 3.5e-07 59.7 94 34.0
Eucgr.B02784 Eucalyptus grandis HOM05D000665 ORTHO05D000285 3.5e-07 59.7 81 37.0
CANSAT64G2197 Cannabis sativa HOM05D003171 ORTHO05D000921 4.5e-07 59.3 97 33.0
Eucgr.L00423 Eucalyptus grandis HOM05D000665 ORTHO05D000285 4.5e-07 59.3 81 35.8
Glyma.15G177200 Glycine max HOM05D003171 ORTHO05D000921 4.5e-07 59.3 106 32.1
CSS0009073 Camellia sinensis var. sinensis HOM05D000665 ORTHO05D000921 5.9e-07 58.9 105 36.2
MBI04_g27247_MAGBIO Magnolia biondii HOM05D000665 ORTHO05D000285 5.9e-07 58.9 78 42.3
Nn2g14028 Nelumbo nucifera HOM05D000665 ORTHO05D000140 7.7e-07 58.5 104 31.7
Eucgr.L02923 Eucalyptus grandis HOM05D000665 ORTHO05D000285 1.0e-06 58.2 100 35.0
PSO724G0339 Papaver somniferum HOM05D003171 ORTHO05D000921 1.0e-06 58.2 144 27.8
TAR080G0001 Trochodendron aralioides HOM05D000034 ORTHO05D000037 1.0e-06 58.2 144 29.2
CSS0048883 Camellia sinensis var. sinensis HOM05D003171 ORTHO05D000921 1.3e-06 57.8 93 34.4
Haze_21389 Corylus avellana HOM05D000665 ORTHO05D000140 1.3e-06 57.8 104 29.8
Lj3A995G65 Lonicera japonica HOM05D008338 ORTHO05D000921 1.3e-06 57.8 97 35.1
Dinv10284 Davidia involucrata HOM05D000665 ORTHO05D000140 1.7e-06 57.4 104 28.8
LjContig00141g0014815 Lotus japonicus HOM05D007209 ORTHO05D000921 1.7e-06 57.4 90 37.8
CiPaw.15G025900 Carya illinoinensis HOM05D003171 ORTHO05D000921 2.2e-06 57.0 97 34.0
Eucgr.L02702 Eucalyptus grandis HOM05D000665 ORTHO05D000285 2.2e-06 57.0 109 33.9
TWI38G2389 Tripterygium wilfordii HOM05D003171 ORTHO05D000921 2.2e-06 57.0 115 29.6
QL03p004820 Quercus lobata HOM05D000665 ORTHO05D000140 2.9e-06 56.6 115 29.6
TWI34G1677 Tripterygium wilfordii HOM05D000665 ORTHO05D000140 2.9e-06 56.6 91 34.1
EL10Ac6g14409 Beta vulgaris HOM05D007209 ORTHO05D000921 3.8e-06 56.2 98 33.7
SGA_v2.0_scaffold13G06723 Striga asiatica HOM05D026701 ORTHO05D019112 3.8e-06 56.2 72 41.7
Aqoxy2G01241 Aquilegia oxysepala HOM05D003171 ORTHO05D000921 5.0e-06 55.8 93 35.5
PGR119G2072 Punica granatum HOM05D000665 ORTHO05D000140 6.5e-06 55.5 229 26.6
Lj1g0022373 Lotus japonicus HOM05D000034 ORTHO05D002688 8.5e-06 55.1 150 29.3


User provided reference genes

Program Settings