Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa001632 Carpinus fangiana HOM05D005283 ORTHO05D006769 0.0e+00 1823.9 923 100.0
PRCOL_00005501 Prasinoderma coloniale HOM05D005283 ORTHO05D006769 4.7e-31 141.0 502 25.5
PSO210G5109 Papaver somniferum HOM05D005283 ORTHO05D006769 4.1e-19 101.3 257 28.4
PSO170G5664 Papaver somniferum HOM05D005283 ORTHO05D006769 1.6e-18 99.4 257 28.0
Manes.03G195900 Manihot esculenta HOM05D005283 ORTHO05D006769 2.0e-18 99.0 256 27.3
THA.LOC104820270 Tarenaya hassleriana HOM05D005283 ORTHO05D006769 2.7e-18 98.6 210 28.6
Lsat_1_v5_gn_5_54040 Lactuca sativa HOM05D005283 ORTHO05D006769 5.9e-18 97.4 217 27.6
Psat4g027360 Pisum sativum HOM05D005283 ORTHO05D006769 5.9e-18 97.4 221 29.0
MD08G1066800 Malus domestica HOM05D005283 ORTHO05D006769 1.0e-17 96.7 224 27.2
FAN17G2169 Fragaria x ananassa HOM05D005283 ORTHO05D006769 1.7e-17 95.9 220 28.2
Hma1.2p1_1185F.1_g265090 Hydrangea macrophylla HOM05D005283 ORTHO05D006769 1.7e-17 95.9 228 28.1
MD13G1167900 Malus domestica HOM05D005283 ORTHO05D006769 1.7e-17 95.9 233 27.5
Nn3g21453 Nelumbo nucifera HOM05D005283 ORTHO05D006769 1.7e-17 95.9 215 27.9
VMungo1215G0467 Vigna mungo HOM05D005283 ORTHO05D006769 1.7e-17 95.9 214 29.9
GSVIVG01017732001 Vitis vinifera HOM05D005283 ORTHO05D006769 1.7e-17 95.9 337 24.3
ATR0796G268 Amborella trichopoda HOM05D005283 ORTHO05D006769 2.3e-17 95.5 332 26.5
Ciclev10004285m.g Citrus clementina HOM05D005283 ORTHO05D006769 2.3e-17 95.5 210 28.6
BcaC06g32968 Brassica carinata HOM05D005283 ORTHO05D006769 2.9e-17 95.1 214 27.6
CARHR290370 Cardamine hirsuta HOM05D005283 ORTHO05D006769 2.9e-17 95.1 214 28.0
Hund20553 Selenicereus undatus HOM05D005283 ORTHO05D006769 2.9e-17 95.1 227 27.8
FAN12G0573 Fragaria x ananassa HOM05D005283 ORTHO05D006769 3.8e-17 94.7 210 28.6
RcHm_v2.0_Chr4g0422381 Rosa chinensis HOM05D005283 ORTHO05D006769 3.8e-17 94.7 210 29.0
TWI53G1858 Tripterygium wilfordii HOM05D005283 ORTHO05D006769 3.8e-17 94.7 234 28.2
AL7G39450 Arabidopsis lyrata HOM05D005283 ORTHO05D006769 5.0e-17 94.4 210 27.6
HanXRQChr13g0411191 Helianthus annuus HOM05D005283 ORTHO05D006769 5.0e-17 94.4 239 26.8
AT4G15840 Arabidopsis thaliana HOM05D005283 ORTHO05D006769 6.6e-17 94.0 210 27.6
FAN12G1245 Fragaria x ananassa HOM05D005283 ORTHO05D006769 6.6e-17 94.0 210 28.6
Phvul.003G105900 Phaseolus vulgaris HOM05D005283 ORTHO05D006769 6.6e-17 94.0 219 29.2
CiPaw.01G148000 Carya illinoinensis HOM05D005283 ORTHO05D006769 8.6e-17 93.6 214 27.6
FvH4_4g18240 Fragaria vesca HOM05D005283 ORTHO05D006769 8.6e-17 93.6 210 28.6
Sp7g14240 Schrenkiella parvula HOM05D005283 ORTHO05D006769 8.6e-17 93.6 213 27.2
Glyma.07G247100 Glycine max HOM05D005283 ORTHO05D006769 1.1e-16 93.2 232 28.0
Pp3c16_9230 Physcomitrium patens HOM05D005283 ORTHO05D006769 1.1e-16 93.2 218 26.6
TAR362G0604 Trochodendron aralioides HOM05D005283 ORTHO05D006769 1.1e-16 93.2 210 28.1
CSS0043341 Camellia sinensis var. sinensis HOM05D005283 ORTHO05D006769 1.5e-16 92.8 221 26.7
ClCG05G006140 Citrullus lanatus HOM05D005283 ORTHO05D006769 1.5e-16 92.8 210 28.6
Dinv29746 Davidia involucrata HOM05D005283 ORTHO05D006769 1.5e-16 92.8 223 27.8
MBI18_g13696_MAGBIO Magnolia biondii HOM05D005283 ORTHO05D006769 1.5e-16 92.8 210 28.1
BcaC06g33444 Brassica carinata HOM05D005283 ORTHO05D006769 1.9e-16 92.4 213 27.2
A03p49360 Brassica napus HOM05D005283 ORTHO05D006769 1.9e-16 92.4 213 27.2
C07p47430 Brassica napus HOM05D005283 ORTHO05D006769 1.9e-16 92.4 213 27.2
BolC7t45270H Brassica oleracea HOM05D005283 ORTHO05D006769 1.9e-16 92.4 213 27.2
ECA240G0403 Erigeron canadensis HOM05D005283 ORTHO05D006769 1.9e-16 92.4 194 29.9
Migut.G00154 Erythranthe guttata HOM05D005283 ORTHO05D006769 1.9e-16 92.4 266 26.7
EL10Ac3g06605 Beta vulgaris HOM05D005283 ORTHO05D006769 2.5e-16 92.0 209 27.3
Lj4g0026758 Lotus japonicus HOM05D005283 ORTHO05D006769 2.5e-16 92.0 216 29.2
Prupe.1G135400 Prunus persica HOM05D005283 ORTHO05D006769 2.5e-16 92.0 224 26.3
SGA_v2.0_scaffold18G08298 Striga asiatica HOM05D005283 ORTHO05D006769 2.5e-16 92.0 236 30.1
HPP92_002145 Vanilla planifolia HOM05D005283 ORTHO05D006769 2.5e-16 92.0 210 27.6
Carub.0007s2581 Capsella rubella HOM05D005283 ORTHO05D006769 3.3e-16 91.7 281 24.6
Cfa015392 Carpinus fangiana HOM05D005283 ORTHO05D006769 3.3e-16 91.7 210 27.6
CsaV3_3G014700 Cucumis sativus L. HOM05D005283 ORTHO05D006769 3.3e-16 91.7 210 28.6
TWI09G0775 Tripterygium wilfordii HOM05D005283 ORTHO05D006769 3.3e-16 91.7 249 26.5
BraA03t14037Z Brassica rapa HOM05D005283 ORTHO05D006769 4.3e-16 91.3 213 26.8
Thhalv10024402m.g Eutrema salsugineum HOM05D005283 ORTHO05D006769 4.3e-16 91.3 214 27.1
Lalb_Chr18g0051671 Lupinus albus HOM05D005283 ORTHO05D006769 4.3e-16 91.3 194 28.9
Actinidia40274 Actinidia chinensis HOM05D005283 ORTHO05D006769 5.6e-16 90.9 210 27.1
Gorai.005G060600 Gossypium raimondii HOM05D005283 ORTHO05D006769 5.6e-16 90.9 225 27.6
Pp3c5_16090 Physcomitrium patens HOM05D005283 ORTHO05D006769 5.6e-16 90.9 197 28.9
Ah.13g074630 Amaranthus hybridus HOM05D005283 ORTHO05D006769 7.3e-16 90.5 217 27.2
Gohir.A02G049600 Gossypium hirsutum HOM05D005283 ORTHO05D006769 7.3e-16 90.5 233 26.6
CANSAT78G0446 Cannabis sativa HOM05D005283 ORTHO05D006769 9.5e-16 90.1 231 26.0
Ca_21491_v3 Cicer arietinum L. HOM05D005283 ORTHO05D006769 9.5e-16 90.1 220 28.2
Dinv44377 Davidia involucrata HOM05D005283 ORTHO05D006769 9.5e-16 90.1 230 28.7
Gohir.D02G054700 Gossypium hirsutum HOM05D005283 ORTHO05D006769 1.2e-15 89.7 202 28.7
Os01g0932600 Oryza sativa ssp. japonica HOM05D005283 ORTHO05D006769 1.2e-15 89.7 206 27.7
Cc03_g01850 Coffea canephora HOM05D005283 ORTHO05D006769 1.6e-15 89.4 219 28.8
Haze_01194 Corylus avellana HOM05D005283 ORTHO05D006769 1.6e-15 89.4 217 26.7
Thecc.04G285400 Theobroma cacao HOM05D005283 ORTHO05D006769 1.6e-15 89.4 218 27.1
Glyma.17G026900 Glycine max HOM05D005283 ORTHO05D006769 2.8e-15 88.6 232 27.6
PGR031G1610 Punica granatum HOM05D005283 ORTHO05D006769 2.8e-15 88.6 210 27.6
QL06p009017 Quercus lobata HOM05D005283 ORTHO05D006769 2.8e-15 88.6 215 28.4
CAN.G185.38 Capsicum annuum HOM05D005283 ORTHO05D006769 4.7e-15 87.8 220 25.9
DCAR_027073 Daucus carota HOM05D005283 ORTHO05D006769 4.7e-15 87.8 201 28.4
Medtr4g119960 Medicago truncatula HOM05D005283 ORTHO05D006769 4.7e-15 87.8 204 28.9
Zm00001eb142310 Zea mays HOM05D005283 ORTHO05D006769 4.7e-15 87.8 258 25.2
MSTRG.3910 Avicennia marina HOM05D005283 ORTHO05D006769 6.1e-15 87.4 249 26.1
Solyc01g080620.3 Solanum lycopersicum HOM05D005283 ORTHO05D006769 6.1e-15 87.4 229 27.1
Sopen01g032430 Solanum pennellii HOM05D005283 ORTHO05D006769 6.1e-15 87.4 229 27.1
TAR633G1039 Trochodendron aralioides HOM05D005283 ORTHO05D006769 6.1e-15 87.4 210 27.6
Duzib151G1199 Durio zibethinus HOM05D005283 ORTHO05D006769 8.0e-15 87.0 265 24.5
Pp3c6_10590 Physcomitrium patens HOM05D005283 ORTHO05D006769 8.0e-15 87.0 224 26.3
Potri.010G014000 Populus trichocarpa HOM05D005283 ORTHO05D006769 8.0e-15 87.0 210 27.6
Sc25g0004780 Simmondsia chinensis HOM05D005283 ORTHO05D006769 8.0e-15 87.0 217 26.3
Aqoxy2G02976 Aquilegia oxysepala HOM05D005283 ORTHO05D006769 1.0e-14 86.7 217 27.6
Nitab4.5_0001120g0020 Nicotiana tabacum HOM05D005283 ORTHO05D006769 1.8e-14 85.9 305 23.9
AUR62041505 Chenopodium quinoa HOM05D005283 ORTHO05D006769 3.1e-14 85.1 230 25.7
unitig_748.g8731 Utricularia gibba HOM05D005283 ORTHO05D006769 5.2e-14 84.3 208 28.4
TPR.G3193 Trifolium pratense HOM05D005283 ORTHO05D006769 6.8e-14 84.0 204 28.4
arahy.Tifrunner.gnm1.ann1.PZAP36 Arachis hypogaea HOM05D005283 ORTHO05D006769 8.9e-14 83.6 221 25.8
arahy.Tifrunner.gnm1.ann1.Z6JJZG Arachis hypogaea HOM05D005283 ORTHO05D006769 8.9e-14 83.6 221 25.8
CDE11G0961 Ceratophyllum demersum HOM05D005283 ORTHO05D006769 8.9e-14 83.6 296 23.6
Sed0007600 Sechium edule HOM05D005283 ORTHO05D006769 8.9e-14 83.6 210 27.6
Atru.BG.90.p Acer truncatum HOM05D005283 ORTHO05D006769 1.5e-13 82.8 201 28.4
COL.COLO4_13862 Corchorus olitorius HOM05D005283 ORTHO05D006769 7.5e-13 80.5 630 21.6
Oeu029706.1 Olea europaea HOM05D005283 ORTHO05D000116 7.5e-13 80.5 229 27.1
Peaxi162Scf01123g00233 Petunia axillaris HOM05D005283 ORTHO05D006769 1.3e-12 79.7 194 26.3
MELO3C006668.2 Cucumis melo HOM05D005283 ORTHO05D006769 1.7e-12 79.3 230 26.1
Lj6C677T9 Lonicera japonica HOM05D005283 ORTHO05D006769 2.2e-12 79.0 191 27.2
Nitab4.5_0000059g0420 Nicotiana tabacum HOM05D005283 ORTHO05D006769 1.4e-11 76.3 220 23.6
vmacro08159 Vaccinium macrocarpon HOM05D005283 ORTHO05D006769 1.2e-10 73.2 270 23.7
MCO04G464 Micromonas commoda HOM05D005283 ORTHO05D006769 1.9e-08 65.9 110 35.5
Eucgr.B01324 Eucalyptus grandis HOM05D005283 ORTHO05D006769 5.6e-08 64.3 169 26.0


User provided reference genes

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