Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa001603 Carpinus fangiana HOM05D010935 ORTHO05D010383 1.2e-118 429.9 212 100.0
CiPaw.01G275300 Carya illinoinensis HOM05D010935 ORTHO05D010383 1.1e-47 194.1 224 54.0
QL08p056651 Quercus lobata HOM05D000336 ORTHO05D002705 1.3e-40 170.6 219 50.7
MD01G1111500 Malus domestica HOM05D010935 ORTHO05D010383 5.2e-26 122.1 197 43.1
Prupe.2G217100 Prunus persica HOM05D010935 ORTHO05D010383 5.7e-25 118.6 199 43.7
MD07G1177700 Malus domestica HOM05D010935 ORTHO05D010383 5.9e-22 108.6 188 44.1
Dinv11796 Davidia involucrata HOM05D000336 ORTHO05D002705 1.6e-19 100.5 223 37.7
FAN10G0666 Fragaria x ananassa HOM05D010935 ORTHO05D010383 2.7e-19 99.8 178 41.6
Thecc.10G069600 Theobroma cacao HOM05D010162 ORTHO05D010383 2.7e-19 99.8 206 38.3
Duzib128G1476 Durio zibethinus HOM05D010162 ORTHO05D010383 3.6e-19 99.4 204 38.2
FAN01G2770 Fragaria x ananassa HOM05D010935 ORTHO05D010383 4.7e-19 99.0 178 41.0
RcHm_v2.0_Chr1g0363961 Rosa chinensis HOM05D010935 ORTHO05D010383 6.1e-19 98.6 177 41.8
RcHm_v2.0_Chr1g0363951 Rosa chinensis HOM05D010935 ORTHO05D010383 5.2e-18 95.5 192 41.1
Potri.008G042900 Populus trichocarpa HOM05D010162 ORTHO05D010383 6.8e-18 95.1 203 36.5
Manes.10G044100 Manihot esculenta HOM05D010162 ORTHO05D010383 1.2e-17 94.4 183 38.8
FAN03G3034 Fragaria x ananassa HOM05D010935 ORTHO05D010383 3.4e-17 92.8 181 40.3
Prupe.2G217000 Prunus persica HOM05D010935 ORTHO05D010383 4.4e-17 92.4 185 40.5
FvH4_7g20010 Fragaria vesca HOM05D010935 ORTHO05D010383 5.7e-17 92.0 185 41.1
FAN06G0306 Fragaria x ananassa HOM05D010935 ORTHO05D010383 5.7e-17 92.0 181 40.3
Eucgr.G02810 Eucalyptus grandis HOM05D010935 ORTHO05D010383 1.7e-16 90.5 206 36.4
Manes.10G043900 Manihot esculenta HOM05D010162 ORTHO05D010383 2.8e-16 89.7 176 39.8
ClCG09G020520 Citrullus lanatus HOM05D040659 ORTHO05D010383 6.3e-16 88.6 203 36.5
MD07G1177600 Malus domestica HOM05D010935 ORTHO05D010383 2.4e-15 86.7 198 36.9
TAR383G0645 Trochodendron aralioides HOM05D003020 ORTHO05D003226 3.1e-15 86.3 245 33.5
COL.COLO4_23723 Corchorus olitorius HOM05D010162 ORTHO05D010383 7.0e-15 85.1 196 38.3
MELO3C002880.2 Cucumis melo HOM05D040659 ORTHO05D010383 7.0e-15 85.1 193 35.2
Manes.10G044000 Manihot esculenta HOM05D010162 ORTHO05D010383 9.2e-15 84.7 181 37.6
FvH4_7g20000 Fragaria vesca HOM05D010935 ORTHO05D010383 2.7e-14 83.2 194 38.7
FAN03G0405 Fragaria x ananassa HOM05D010935 ORTHO05D010383 4.5e-14 82.4 194 38.7
TAR383G0288 Trochodendron aralioides HOM05D003020 ORTHO05D003226 1.3e-13 80.9 203 36.5
TAR626G0085 Trochodendron aralioides HOM05D003020 ORTHO05D003226 2.3e-13 80.1 231 32.5
Gohir.A13G024900 Gossypium hirsutum HOM05D010162 ORTHO05D010383 2.9e-13 79.7 207 34.3
Duzib114G0652 Durio zibethinus HOM05D010162 ORTHO05D010383 6.6e-13 78.6 203 37.4
Manes.10G043800 Manihot esculenta HOM05D010162 ORTHO05D010383 1.9e-12 77.0 179 33.5
TAR626G1849 Trochodendron aralioides HOM05D003020 ORTHO05D003226 2.5e-12 76.6 232 32.3
Gohir.D01G117600 Gossypium hirsutum HOM05D010162 ORTHO05D010383 4.3e-12 75.9 205 34.6
TAR625G0330 Trochodendron aralioides HOM05D003020 ORTHO05D003226 4.3e-12 75.9 227 30.4
Gohir.D13G023650 Gossypium hirsutum HOM05D010162 ORTHO05D010383 5.6e-12 75.5 199 34.7
Gorai.002G143100 Gossypium raimondii HOM05D010162 ORTHO05D010383 5.6e-12 75.5 205 34.6
Gorai.013G026600 Gossypium raimondii HOM05D010162 ORTHO05D010383 5.6e-12 75.5 212 34.4
CsaV3_5G025880 Cucumis sativus L. HOM05D040659 ORTHO05D010383 7.3e-12 75.1 186 33.9
FAN06G2629 Fragaria x ananassa HOM05D010935 ORTHO05D010383 7.3e-12 75.1 190 38.4
TAR383G0698 Trochodendron aralioides HOM05D003020 ORTHO05D003226 7.3e-12 75.1 240 31.7
Gorai.013G026500 Gossypium raimondii HOM05D010162 ORTHO05D010383 1.2e-11 74.3 201 33.3
Gohir.A13G024800 Gossypium hirsutum HOM05D010162 ORTHO05D010383 4.7e-11 72.4 200 34.5
Potri.010G219300 Populus trichocarpa HOM05D010162 ORTHO05D010383 8.0e-11 71.6 174 36.8
Dinv41250 Davidia involucrata HOM05D003020 ORTHO05D003226 1.4e-10 70.9 224 29.9
TAR383G0860 Trochodendron aralioides HOM05D003020 ORTHO05D003226 1.8e-10 70.5 234 31.6
Gohir.D13G023700 Gossypium hirsutum HOM05D010162 ORTHO05D010383 3.0e-10 69.7 202 32.7
Actinidia03033 Actinidia chinensis HOM05D011460 ORTHO05D010383 7.5e-09 65.1 197 31.0
Dinv11798 Davidia involucrata HOM05D003020 ORTHO05D003226 9.8e-09 64.7 203 31.5
Hma1.2p1_2080F.1_g313480 Hydrangea macrophylla HOM05D011460 ORTHO05D010383 1.3e-08 64.3 229 29.7
Hma1.2p1_0453F.1_g156030 Hydrangea macrophylla HOM05D003020 ORTHO05D003226 8.3e-08 61.6 197 28.4
Dinv31354 Davidia involucrata HOM05D003020 ORTHO05D003226 1.1e-07 61.2 200 30.0
Nitab4.5_0005460g0040 Nicotiana tabacum HOM05D011460 ORTHO05D010383 1.1e-07 61.2 210 26.7
Atru.chr7.633 Acer truncatum HOM05D003020 ORTHO05D003226 1.4e-07 60.8 239 25.9
TWI38G1817 Tripterygium wilfordii HOM05D003020 ORTHO05D003226 1.4e-07 60.8 201 27.9
Atru.chr12.713 Acer truncatum HOM05D043902 ORTHO05D010383 1.8e-07 60.5 96 42.7
Actinidia04141 Actinidia chinensis HOM05D003020 ORTHO05D003226 1.8e-07 60.5 209 32.5
Nitab4.5_0021955g0010 Nicotiana tabacum HOM05D011460 ORTHO05D010383 2.4e-07 60.1 215 27.9
Gohir.D13G023750 Gossypium hirsutum HOM05D010162 ORTHO05D010383 3.2e-07 59.7 211 32.7
FvH4_4g08220 Fragaria vesca HOM05D003020 ORTHO05D003226 7.0e-07 58.5 239 28.5
Atru.chr12.703 Acer truncatum HOM05D043902 ORTHO05D010383 9.2e-07 58.2 96 42.7
Gohir.D13G023725 Gossypium hirsutum HOM05D010162 ORTHO05D010383 9.2e-07 58.2 211 32.2
FAN12G0399 Fragaria x ananassa HOM05D003020 ORTHO05D003226 1.6e-06 57.4 239 28.0
Gorai.013G026700 Gossypium raimondii HOM05D010162 ORTHO05D010383 1.6e-06 57.4 212 31.1
Dinv42724 Davidia involucrata HOM05D003020 ORTHO05D003226 2.0e-06 57.0 209 30.1
Dinv43377 Davidia involucrata HOM05D003020 ORTHO05D003226 2.0e-06 57.0 209 30.1
Oeu026427.1 Olea europaea HOM05D011460 ORTHO05D010383 2.0e-06 57.0 231 30.3
Cpa.g.sc95.49 Carica papaya HOM05D003020 ORTHO05D003226 2.7e-06 56.6 240 27.1
Gohir.A13G024950 Gossypium hirsutum HOM05D010162 ORTHO05D010383 3.5e-06 56.2 209 30.1
Gorai.004G031500 Gossypium raimondii HOM05D003020 ORTHO05D003226 5.9e-06 55.5 214 27.1
VMungo1215G0012 Vigna mungo HOM05D003020 ORTHO05D003226 5.9e-06 55.5 220 27.3


User provided reference genes

Program Settings