Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa001577 Carpinus fangiana HOM05D004534 ORTHO05D005413 2.0e-225 785.4 383 100.0
Haze_16951 Corylus avellana HOM05D004534 ORTHO05D005413 3.6e-203 711.4 397 89.9
CiPaw.01G277800 Carya illinoinensis HOM05D004534 ORTHO05D005413 2.3e-194 682.2 381 87.4
Prupe.2G220600 Prunus persica HOM05D004534 ORTHO05D005413 7.6e-177 624.0 388 78.6
RcHm_v2.0_Chr1g0364391 Rosa chinensis HOM05D004534 ORTHO05D005413 1.1e-172 610.1 385 76.1
GSVIVG01016358001 Vitis vinifera HOM05D004534 ORTHO05D005413 1.4e-170 603.2 367 80.4
Actinidia03016 Actinidia chinensis HOM05D004534 ORTHO05D005413 5.4e-167 591.3 387 76.0
Ciclev10031838m.g Citrus clementina HOM05D004534 ORTHO05D005413 2.7e-166 589.0 386 76.4
Potri.010G216000 Populus trichocarpa HOM05D004534 ORTHO05D005413 1.0e-165 587.0 373 77.7
CSS0028612 Camellia sinensis var. sinensis HOM05D004534 ORTHO05D005413 1.3e-165 586.6 412 71.4
Nn2g10612 Nelumbo nucifera HOM05D004534 ORTHO05D005413 5.1e-165 584.7 384 73.4
Potri.008G045700 Populus trichocarpa HOM05D004534 ORTHO05D005413 8.1e-163 577.4 364 76.6
Thecc.10G065400 Theobroma cacao HOM05D004534 ORTHO05D005413 1.4e-162 576.6 380 75.3
Atru.chr12.616 Acer truncatum HOM05D004534 ORTHO05D005413 6.9e-162 574.3 410 71.5
Dinv31374 Davidia involucrata HOM05D004534 ORTHO05D005413 3.4e-161 572.0 346 78.3
MD07G1181700 Malus domestica HOM05D004534 ORTHO05D005413 9.9e-161 570.5 365 74.8
FAN06G4936 Fragaria x ananassa HOM05D004534 ORTHO05D005413 1.9e-159 566.2 398 69.1
TWI38G2053 Tripterygium wilfordii HOM05D004534 ORTHO05D005413 6.0e-158 561.2 372 74.7
Gorai.009G315700 Gossypium raimondii HOM05D004534 ORTHO05D005413 2.3e-157 559.3 376 72.3
PGR044G2491 Punica granatum HOM05D004534 ORTHO05D005413 9.6e-156 553.9 387 71.6
Gohir.D05G298500 Gossypium hirsutum HOM05D004534 ORTHO05D005413 4.8e-155 551.6 376 71.3
QL08p057247 Quercus lobata HOM05D004534 ORTHO05D005413 1.1e-154 550.4 543 55.6
COL.COLO4_23775 Corchorus olitorius HOM05D004534 ORTHO05D005413 1.2e-153 547.0 348 75.6
PSO339G4951 Papaver somniferum HOM05D004534 ORTHO05D005413 1.9e-151 539.7 384 68.8
Lsat_1_v5_gn_8_20980 Lactuca sativa HOM05D004534 ORTHO05D005413 4.2e-151 538.5 380 68.7
ECA233G2770 Erigeron canadensis HOM05D004534 ORTHO05D000452 2.1e-150 536.2 376 69.1
PSO384G4947 Papaver somniferum HOM05D004534 ORTHO05D005413 3.5e-150 535.4 385 68.1
FAN03G3228 Fragaria x ananassa HOM05D004534 ORTHO05D005413 1.1e-148 530.4 412 65.3
HanXRQChr08g0219701 Helianthus annuus HOM05D004534 ORTHO05D005413 1.5e-148 530.0 382 68.6
Dinv32819 Davidia involucrata HOM05D004534 ORTHO05D005413 1.9e-148 529.6 386 68.1
GSVIVG01025090001 Vitis vinifera HOM05D004534 ORTHO05D005413 5.7e-148 528.1 360 71.1
Hma1.2p1_2042F.1_g312230 Hydrangea macrophylla HOM05D004534 ORTHO05D005413 7.4e-148 527.7 383 68.9
Manes.10G040600 Manihot esculenta HOM05D004534 ORTHO05D005413 5.3e-146 521.5 383 70.2
Atru.chr3.3749 Acer truncatum HOM05D004534 ORTHO05D005413 3.4e-145 518.8 388 66.5
FAN01G1783 Fragaria x ananassa HOM05D004534 ORTHO05D005413 3.4e-145 518.8 415 63.9
Cpa.g.sc139.34 Carica papaya HOM05D004534 ORTHO05D005413 5.8e-145 518.1 358 69.3
Migut.F02016 Erythranthe guttata HOM05D004534 ORTHO05D005413 2.9e-144 515.8 369 68.3
Cfa011397 Carpinus fangiana HOM05D004534 ORTHO05D005413 6.5e-144 514.6 346 71.7
Aqoxy4G03153 Aquilegia oxysepala HOM05D004534 ORTHO05D005413 8.4e-144 514.2 391 66.2
Peaxi162Scf01024g00128 Petunia axillaris HOM05D004534 ORTHO05D005413 2.5e-143 512.7 393 64.9
Thhalv10002577m.g Eutrema salsugineum HOM05D004534 ORTHO05D005413 3.2e-143 512.3 357 68.3
CsaV3_5G026040 Cucumis sativus L. HOM05D004534 ORTHO05D005413 5.5e-143 511.5 367 68.9
Manes.11G138500 Manihot esculenta HOM05D004534 ORTHO05D005413 7.2e-143 511.1 384 65.6
QL01p035546 Quercus lobata HOM05D004534 ORTHO05D005413 7.2e-143 511.1 362 69.9
Ciclev10030338m.g Citrus clementina HOM05D004534 ORTHO05D005413 9.3e-143 510.8 382 66.2
BraA06t25216Z Brassica rapa HOM05D004534 ORTHO05D005413 2.1e-142 509.6 370 65.4
CANSAT54G1456 Cannabis sativa HOM05D004534 ORTHO05D005413 2.1e-142 509.6 368 67.1
A06p21280 Brassica napus HOM05D004534 ORTHO05D005413 6.1e-142 508.1 370 65.1
Phvul.L001232 Phaseolus vulgaris HOM05D004534 ORTHO05D005413 6.1e-142 508.1 359 67.4
MD11G1120100 Malus domestica HOM05D004534 ORTHO05D005413 1.8e-141 506.5 360 68.3
TWI31G1398 Tripterygium wilfordii HOM05D004534 ORTHO05D005413 3.9e-141 505.4 382 65.2
BcaC01g01956 Brassica carinata HOM05D004534 ORTHO05D005413 5.1e-141 505.0 370 64.9
C03p70180 Brassica napus HOM05D004534 ORTHO05D005413 5.1e-141 505.0 370 64.9
FvH4_3g34110 Fragaria vesca HOM05D004534 ORTHO05D005413 8.7e-141 504.2 377 66.3
Sabra08G0032000 Salix brachista HOM05D004534 ORTHO05D005413 8.7e-141 504.2 351 70.4
CSS0009646 Camellia sinensis var. sinensis HOM05D004534 ORTHO05D005413 1.5e-140 503.4 366 67.8
FAN11G3381 Fragaria x ananassa HOM05D004534 ORTHO05D005413 1.5e-140 503.4 377 66.3
RcHm_v2.0_Chr5g0061761 Rosa chinensis HOM05D004534 ORTHO05D005413 1.9e-140 503.1 389 65.6
BolC3t19273H Brassica oleracea HOM05D004534 ORTHO05D005413 2.5e-140 502.7 370 64.6
Lalb_Chr24g0394391 Lupinus albus HOM05D004534 ORTHO05D005413 2.5e-140 502.7 359 66.3
CARHR149920 Cardamine hirsuta HOM05D004534 ORTHO05D005413 7.4e-140 501.1 370 65.1
ATR0582G124 Amborella trichopoda HOM05D004534 ORTHO05D005413 1.6e-139 500.0 355 67.0
AL5G24380 Arabidopsis lyrata HOM05D004534 ORTHO05D005413 2.2e-139 499.6 357 67.2
CAN.G394.3 Capsicum annuum HOM05D004534 ORTHO05D005413 2.2e-139 499.6 365 67.9
THA.LOC104814850 Tarenaya hassleriana HOM05D004534 ORTHO05D005413 2.8e-139 499.2 370 64.6
Nitab4.5_0000270g0130 Nicotiana tabacum HOM05D004534 ORTHO05D005413 3.7e-139 498.8 360 67.5
Glyma.13G330000 Glycine max HOM05D004534 ORTHO05D005413 4.8e-139 498.4 359 66.0
Sp5g15770 Schrenkiella parvula HOM05D004534 ORTHO05D005413 1.1e-138 497.3 357 66.7
Rhsim01G0222900 Rhododendron simsii HOM05D004534 ORTHO05D005413 1.4e-138 496.9 363 66.9
Lj3g0025326 Lotus japonicus HOM05D004534 ORTHO05D005413 1.8e-138 496.5 373 66.2
Peaxi162Scf00072g00025 Petunia axillaris HOM05D004534 ORTHO05D005413 2.4e-138 496.1 346 69.1
Aa31LG4G14970 Aethionema arabicum HOM05D004534 ORTHO05D005413 3.1e-138 495.7 357 66.1
AT3G45740 Arabidopsis thaliana HOM05D004534 ORTHO05D005413 5.3e-138 495.0 358 67.0
FAN06G3998 Fragaria x ananassa HOM05D004534 ORTHO05D005413 9.0e-138 494.2 532 52.3
Solyc06g075540.3 Solanum lycopersicum HOM05D004534 ORTHO05D005413 9.0e-138 494.2 352 67.3
Zm00001eb397220 Zea mays HOM05D004534 ORTHO05D005413 2.0e-137 493.0 355 65.4
PGR102G1844 Punica granatum HOM05D004534 ORTHO05D005413 3.4e-137 492.3 388 63.7
MELO3C026849.2 Cucumis melo HOM05D004534 ORTHO05D005413 5.9e-137 491.5 358 67.3
arahy.Tifrunner.gnm1.ann1.NM19P7 Arachis hypogaea HOM05D004534 ORTHO05D005413 7.7e-137 491.1 342 68.4
Medtr2g095830 Medicago truncatula HOM05D004534 ORTHO05D005413 1.0e-136 490.7 354 64.7
Nitab4.5_0004774g0020 Nicotiana tabacum HOM05D004534 ORTHO05D005413 1.0e-136 490.7 342 69.3
Sabra10G0167000 Salix brachista HOM05D004534 ORTHO05D005413 1.0e-136 490.7 373 67.8
PGSC0003DMG402006611 Solanum tuberosum HOM05D004534 ORTHO05D005413 2.2e-136 489.6 356 66.9
Sed0013966 Sechium edule HOM05D004534 ORTHO05D005413 2.9e-136 489.2 358 66.2
Duzib106G1068 Durio zibethinus HOM05D004534 ORTHO05D005413 3.8e-136 488.8 380 66.6
EL10Ac2g03539 Beta vulgaris HOM05D004534 ORTHO05D005413 5.0e-136 488.4 360 66.9
TPR.G11635 Trifolium pratense HOM05D004534 ORTHO05D005413 5.0e-136 488.4 355 64.5
HPP92_003600 Vanilla planifolia HOM05D004534 ORTHO05D005413 5.0e-136 488.4 356 64.9
arahy.Tifrunner.gnm1.ann1.AW7LWX Arachis hypogaea HOM05D004534 ORTHO05D005413 1.4e-135 486.9 342 67.8
DCAR_018857 Daucus carota HOM05D004534 ORTHO05D005413 3.2e-135 485.7 382 64.1
Psat5g281360 Pisum sativum HOM05D004534 ORTHO05D005413 5.5e-135 485.0 346 65.3
Migut.D02166 Erythranthe guttata HOM05D004534 ORTHO05D005413 7.2e-135 484.6 358 67.0
FAN21G3213 Fragaria x ananassa HOM05D004534 ORTHO05D005413 9.4e-135 484.2 388 63.1
Thecc.09G335300 Theobroma cacao HOM05D004534 ORTHO05D005413 2.1e-134 483.0 366 65.8
Os03g0284500 Oryza sativa ssp. japonica HOM05D004534 ORTHO05D005413 2.7e-134 482.6 355 63.7
CsaV3_1G012750 Cucumis sativus L. HOM05D004534 ORTHO05D005413 1.8e-133 479.9 358 66.2
vmacro14490 Vaccinium macrocarpon HOM05D004534 ORTHO05D005413 2.3e-133 479.6 433 58.7
MSTRG.18620 Avicennia marina HOM05D004534 ORTHO05D005413 3.9e-133 478.8 353 65.2
Nitab4.5_0000561g0030 Nicotiana tabacum HOM05D004534 ORTHO05D005413 2.0e-132 476.5 359 67.7
MELO3C025495.2 Cucumis melo HOM05D004534 ORTHO05D005413 3.3e-132 475.7 382 64.1
Gohir.D08G009000 Gossypium hirsutum HOM05D004534 ORTHO05D005413 3.3e-132 475.7 362 65.5
Gohir.A08G000096 Gossypium hirsutum HOM05D004534 ORTHO05D005413 9.7e-132 474.2 362 65.7
Cc01_g11880 Coffea canephora HOM05D004534 ORTHO05D005413 1.7e-131 473.4 364 63.7
VMungo1080G0465 Vigna mungo HOM05D004534 ORTHO05D005413 1.7e-131 473.4 359 63.8
Ca_01369_v3 Cicer arietinum L. HOM05D004534 ORTHO05D005413 2.2e-131 473.0 342 64.3
Lj1A926G31 Lonicera japonica HOM05D004534 ORTHO05D005413 1.0e-128 464.2 371 66.6
unitig_37.g12680 Utricularia gibba HOM05D004534 ORTHO05D005413 1.2e-126 457.2 349 63.3
Ah.10g033090 Amaranthus hybridus HOM05D004534 ORTHO05D005413 7.9e-126 454.5 367 62.9
CDE04G1344 Ceratophyllum demersum HOM05D004534 ORTHO05D005413 3.9e-125 452.2 397 59.4
Oeu055059.2 Olea europaea HOM05D004534 ORTHO05D005413 8.8e-125 451.1 327 68.2
EL10Ac7g15886 Beta vulgaris HOM05D004534 ORTHO05D005413 6.3e-123 444.9 409 56.5
BcaB01g01071 Brassica carinata HOM05D004534 ORTHO05D005413 9.1e-122 441.0 310 66.1
Gohir.A05G298800 Gossypium hirsutum HOM05D004534 ORTHO05D005413 6.5e-120 434.9 272 76.5
Hund18962 Selenicereus undatus HOM05D004534 ORTHO05D005413 2.7e-118 429.5 344 61.9
Nitab4.5_0000830g0040 Nicotiana tabacum HOM05D004534 ORTHO05D005413 1.4e-117 427.2 346 63.6
FAN25G2491 Fragaria x ananassa HOM05D004534 ORTHO05D005413 1.8e-117 426.8 405 56.3
AUR62009701 Chenopodium quinoa HOM05D004534 ORTHO05D005413 4.0e-117 425.6 344 61.6
CSS0050279 Camellia sinensis var. sinensis HOM05D004534 ORTHO05D005413 5.2e-117 425.2 381 59.1
TAR633G1279 Trochodendron aralioides HOM05D004534 ORTHO05D005413 5.7e-116 421.8 269 74.7
Gorai.004G002200 Gossypium raimondii HOM05D004534 ORTHO05D005413 1.2e-113 414.1 316 65.8
Sc06g0008140 Simmondsia chinensis HOM05D004534 ORTHO05D005413 1.3e-112 410.6 385 55.1
AUR62036245 Chenopodium quinoa HOM05D004534 ORTHO05D005413 1.2e-110 404.1 382 55.5
FvH4_7g20500 Fragaria vesca HOM05D004534 ORTHO05D005413 1.6e-110 403.7 269 73.6
Sed0004393 Sechium edule HOM05D004534 ORTHO05D005413 1.8e-106 390.2 353 59.5
Lj1A180G32 Lonicera japonica HOM05D004534 ORTHO05D005413 1.6e-105 387.1 312 61.9
FAN16G0790 Fragaria x ananassa HOM05D004534 ORTHO05D005413 7.7e-105 384.8 404 54.0
Oeu051854.2 Olea europaea HOM05D004534 ORTHO05D005413 1.7e-104 383.6 411 50.9
AUR62036013 Chenopodium quinoa HOM05D004534 ORTHO05D005413 2.5e-103 379.8 401 52.1
CiPaw.13G104100 Carya illinoinensis HOM05D004534 ORTHO05D005413 2.5e-95 353.2 245 69.4
Pp3c16_8740 Physcomitrium patens HOM05D004534 ORTHO05D005413 6.8e-93 345.1 366 48.9
Mapoly0029s0123 Marchantia polymorpha HOM05D004534 ORTHO05D005413 8.9e-93 344.7 383 46.7
Prupe.6G090300 Prunus persica HOM05D004534 ORTHO05D005413 1.1e-90 337.8 244 68.9
Ciclev10032311m.g Citrus clementina HOM05D004534 ORTHO05D005413 9.2e-90 334.7 288 62.5
COL.COLO4_18394 Corchorus olitorius HOM05D004534 ORTHO05D005413 3.5e-89 332.8 307 55.4
ClCG09G020370 Citrullus lanatus HOM05D004534 ORTHO05D005413 1.3e-88 330.9 380 48.9
SGA_v2.0_scaffold61G21215 Striga asiatica HOM05D004534 ORTHO05D005413 1.2e-84 317.8 243 61.7
SMO118G0317 Selaginella moellendorffii HOM05D004534 ORTHO05D005413 1.3e-83 314.3 354 47.5
FAN10G0821 Fragaria x ananassa HOM05D004534 ORTHO05D005413 2.2e-83 313.5 363 50.1
Carub.0005s1159 Capsella rubella HOM05D004534 ORTHO05D005413 3.9e-80 302.8 239 61.1
Cc09_g02390 Coffea canephora HOM05D004534 ORTHO05D005413 5.2e-77 292.4 197 72.6
MBI18_g24932_MAGBIO Magnolia biondii HOM05D004534 ORTHO05D005413 5.2e-77 292.4 530 36.2
Sopen06g031920 Solanum pennellii HOM05D004534 ORTHO05D005413 3.2e-74 283.1 202 68.8
Cpa.g.sc1.278 Carica papaya HOM05D004534 ORTHO05D005413 7.3e-63 245.4 263 52.1
CBR_g24062 Chara braunii HOM05D004534 ORTHO05D005413 2.6e-60 236.9 305 42.0
AagrBONN_evm.TU.Sc2ySwM_228.5090 Anthoceros agrestis HOM05D004534 ORTHO05D005413 3.3e-55 219.9 195 52.8
Nitab4.5_0000830g0060 Nicotiana tabacum HOM05D004534 ORTHO05D005413 8.1e-46 188.7 172 58.7
Cc09_g02400 Coffea canephora HOM05D004534 ORTHO05D005413 5.5e-42 176.0 122 72.1
Cfa024137 Carpinus fangiana HOM05D004534 ORTHO05D005413 4.6e-41 172.9 368 33.4
PRCOL_00005152 Prasinoderma coloniale HOM05D004534 ORTHO05D005413 2.4e-37 160.6 313 32.9
Cre01.g013250 Chlamydomonas reinhardtii HOM05D004534 ORTHO05D005413 2.2e-35 154.1 328 29.9
AUR62035991 Chenopodium quinoa HOM05D004534 ORTHO05D005413 2.1e-30 137.5 118 56.8
VMungo0464G2039 Vigna mungo HOM05D004534 ORTHO05D005413 6.7e-24 115.9 94 55.3
RcHm_v2.0_Chr1g0364361 Rosa chinensis HOM05D003391 ORTHO05D005413 1.5e-20 104.8 56 82.1
Glyma.15G044000 Glycine max HOM05D004534 ORTHO05D005413 3.8e-19 100.1 81 58.0
CAN.G829.5 Capsicum annuum HOM05D004534 ORTHO05D005706 3.6e-17 93.6 63 65.1
RcHm_v2.0_Chr5g0046071 Rosa chinensis HOM05D004534 ORTHO05D005413 1.0e-16 92.0 50 84.0
Actinidia38238 Actinidia chinensis HOM05D004534 ORTHO05D005413 2.8e-14 84.0 135 38.5
Nitab4.5_0000830g0070 Nicotiana tabacum HOM05D004534 ORTHO05D005413 4.1e-13 80.1 104 45.2
AagrBONN_evm.TU.Sc2ySwM_117.2640 Anthoceros agrestis HOM05D012537 ORTHO05D009535 6.1e-09 66.2 35 77.1
SEGI_35437 Sequoiadendron giganteum HOM05D004534 ORTHO05D005413 3.9e-08 63.5 43 69.8


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