Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa001558 Carpinus fangiana HOM05D007397 ORTHO05D009336 3.8e-95 351.7 201 100.0
Haze_16973 Corylus avellana HOM05D007397 ORTHO05D009336 9.1e-89 330.5 191 93.7
CiPaw.01G279900 Carya illinoinensis HOM05D007397 ORTHO05D009336 2.9e-71 272.3 190 78.9
Cfa009156 Carpinus fangiana HOM05D007397 ORTHO05D009336 7.5e-59 231.1 133 94.7
MD07G1184800 Malus domestica HOM05D007397 ORTHO05D009336 3.7e-58 228.8 191 68.1
Glyma.04G095200 Glycine max HOM05D007397 ORTHO05D009336 2.4e-57 226.1 189 66.7
QL08p057549 Quercus lobata HOM05D007397 ORTHO05D009336 2.0e-56 223.0 190 67.9
GSVIVG01032626001 Vitis vinifera HOM05D007397 ORTHO05D009336 2.0e-56 223.0 201 64.7
Lj5g0010768 Lotus japonicus HOM05D007397 ORTHO05D009336 1.0e-55 220.7 189 64.6
MELO3C025487.2 Cucumis melo HOM05D007397 ORTHO05D009336 1.3e-55 220.3 188 68.1
Prupe.2G224700 Prunus persica HOM05D007397 ORTHO05D009336 3.8e-55 218.8 191 67.0
Ca_11323_v3 Cicer arietinum L. HOM05D007397 ORTHO05D009336 5.0e-55 218.4 190 66.3
FAN03G3257 Fragaria x ananassa HOM05D007397 ORTHO05D009336 5.0e-55 218.4 184 65.2
Hma1.2p1_0348F.1_g131665 Hydrangea macrophylla HOM05D007397 ORTHO05D009336 5.0e-55 218.4 192 66.7
Hma1.2p1_0348F.1_g131670 Hydrangea macrophylla HOM05D007397 ORTHO05D009336 5.0e-55 218.4 192 66.7
ClCG09G020320 Citrullus lanatus HOM05D007397 ORTHO05D009336 8.6e-55 217.6 187 66.8
Glyma.06G097000 Glycine max HOM05D007397 ORTHO05D009336 5.6e-54 214.9 182 64.8
CANSAT64G2695 Cannabis sativa HOM05D007397 ORTHO05D009336 2.8e-53 212.6 193 65.8
Medtr1g115740 Medicago truncatula HOM05D007397 ORTHO05D009336 1.0e-52 210.7 193 60.6
Lalb_Chr06g0164111 Lupinus albus HOM05D007397 ORTHO05D009336 1.8e-52 209.9 190 64.2
CSS0023256 Camellia sinensis var. sinensis HOM05D007397 ORTHO05D009336 4.0e-52 208.8 190 63.7
FAN01G1406 Fragaria x ananassa HOM05D007397 ORTHO05D009336 5.2e-52 208.4 184 63.0
PGSC0003DMG400011470 Solanum tuberosum HOM05D007397 ORTHO05D009336 1.5e-51 206.8 191 66.0
FAN01G1537 Fragaria x ananassa HOM05D007397 ORTHO05D009336 2.0e-51 206.5 184 62.5
CsaV3_5G026110 Cucumis sativus L. HOM05D007397 ORTHO05D009336 2.6e-51 206.1 184 67.4
TAR320G0002 Trochodendron aralioides HOM05D007397 ORTHO05D009336 2.6e-51 206.1 188 60.6
Sopen04g005370 Solanum pennellii HOM05D007397 ORTHO05D009336 5.8e-51 204.9 193 64.2
MSTRG.7898 Avicennia marina HOM05D007397 ORTHO05D009336 1.7e-50 203.4 193 62.7
Potri.010G213600 Populus trichocarpa HOM05D007397 ORTHO05D009336 1.7e-50 203.4 190 65.3
Potri.008G047800 Populus trichocarpa HOM05D007397 ORTHO05D009336 2.9e-50 202.6 198 64.6
Cpa.g.sc1.304 Carica papaya HOM05D007397 ORTHO05D009336 3.7e-50 202.2 188 65.4
Nn2g12828 Nelumbo nucifera HOM05D007397 ORTHO05D009336 3.7e-50 202.2 188 61.2
PGR142G1402 Punica granatum HOM05D007397 ORTHO05D009336 6.4e-50 201.4 196 62.2
Phvul.009G036400 Phaseolus vulgaris HOM05D007397 ORTHO05D009336 1.1e-49 200.7 189 60.8
TPR.G10388 Trifolium pratense HOM05D007397 ORTHO05D009336 1.4e-49 200.3 195 60.0
Cc02_g08640 Coffea canephora HOM05D007397 ORTHO05D009336 1.9e-49 199.9 198 62.1
RcHm_v2.0_Chr1g0365021 Rosa chinensis HOM05D007397 ORTHO05D009336 1.9e-49 199.9 186 63.4
Dinv25942 Davidia involucrata HOM05D007397 ORTHO05D009336 2.4e-49 199.5 178 69.1
Psat6g239080 Pisum sativum HOM05D007397 ORTHO05D009336 2.4e-49 199.5 194 58.2
Sabra08G0033900 Salix brachista HOM05D007397 ORTHO05D009336 2.4e-49 199.5 199 64.8
Solyc04g010190.1 Solanum lycopersicum HOM05D007397 ORTHO05D009336 2.4e-49 199.5 191 63.4
Actinidia38224 Actinidia chinensis HOM05D007397 ORTHO05D009336 3.2e-49 199.1 185 62.2
Migut.L01413 Erythranthe guttata HOM05D007397 ORTHO05D009336 3.2e-49 199.1 169 63.9
Rhsim09G0155900 Rhododendron simsii HOM05D007397 ORTHO05D009336 5.4e-49 198.4 184 61.4
Oeu044824.1 Olea europaea HOM05D007397 ORTHO05D009336 2.7e-48 196.1 193 61.7
Sed0011140 Sechium edule HOM05D007397 ORTHO05D009336 1.0e-47 194.1 190 63.2
Aqoxy5G01687 Aquilegia oxysepala HOM05D007397 ORTHO05D009336 2.3e-47 193.0 191 60.2
TWI38G1005 Tripterygium wilfordii HOM05D007397 ORTHO05D009336 2.3e-47 193.0 196 63.3
VMungo1309G1572 Vigna mungo HOM05D007397 ORTHO05D009336 5.0e-47 191.8 189 59.8
MBI05_g32638_MAGBIO Magnolia biondii HOM05D007397 ORTHO05D009336 2.5e-46 189.5 156 64.7
Carub.0003s1170 Capsella rubella HOM05D007397 ORTHO05D009336 4.3e-46 188.7 184 60.9
Lj1P929T40 Lonicera japonica HOM05D007397 ORTHO05D009336 1.2e-45 187.2 139 69.1
Sp3g10540 Schrenkiella parvula HOM05D007397 ORTHO05D009336 1.2e-45 187.2 183 59.6
SGA_v2.0_scaffold165G38243 Striga asiatica HOM05D007397 ORTHO05D009336 2.1e-45 186.4 193 58.0
FAN10G1155 Fragaria x ananassa HOM05D007397 ORTHO05D009336 3.6e-45 185.7 177 61.0
EL10Ac2g03499 Beta vulgaris HOM05D007397 ORTHO05D009336 6.2e-45 184.9 180 58.3
BcaC05g29269 Brassica carinata HOM05D007397 ORTHO05D009336 6.2e-45 184.9 182 59.9
Aa31sc153G60 Aethionema arabicum HOM05D007397 ORTHO05D009336 1.1e-44 184.1 183 61.7
A05p37050 Brassica napus HOM05D007397 ORTHO05D009336 1.1e-44 184.1 179 60.3
AUR62042666 Chenopodium quinoa HOM05D007397 ORTHO05D009336 1.1e-44 184.1 193 60.1
Thhalv10021616m.g Eutrema salsugineum HOM05D007397 ORTHO05D009336 1.1e-44 184.1 156 67.9
Gohir.D10G218000 Gossypium hirsutum HOM05D007397 ORTHO05D009336 1.1e-44 184.1 189 60.8
AL3G23990 Arabidopsis lyrata HOM05D007397 ORTHO05D009336 1.8e-44 183.3 185 60.5
C05p55480 Brassica napus HOM05D007397 ORTHO05D009336 1.8e-44 183.3 182 58.2
BolC5t34214H Brassica oleracea HOM05D007397 ORTHO05D009336 1.8e-44 183.3 182 58.2
THA.LOC104827311 Tarenaya hassleriana HOM05D007397 ORTHO05D009336 1.8e-44 183.3 156 65.4
Gorai.011G244600 Gossypium raimondii HOM05D007397 ORTHO05D009336 2.3e-44 183.0 192 60.4
BraA05t22502Z Brassica rapa HOM05D007397 ORTHO05D009336 3.1e-44 182.6 184 57.6
CARHR086880 Cardamine hirsuta HOM05D007397 ORTHO05D009336 3.1e-44 182.6 180 59.4
HanXRQChr14g0460741 Helianthus annuus HOM05D007397 ORTHO05D009336 5.2e-44 181.8 183 59.6
THA.LOC104809886 Tarenaya hassleriana HOM05D007397 ORTHO05D009336 1.2e-43 180.6 184 57.6
AT3G12345 Arabidopsis thaliana HOM05D007397 ORTHO05D009336 2.0e-43 179.9 183 58.5
Thecc.10G062300 Theobroma cacao HOM05D007397 ORTHO05D009336 5.8e-43 178.3 198 60.1
DCAR_015250 Daucus carota HOM05D007397 ORTHO05D009336 6.4e-42 174.9 134 68.7
SalBow2G2387 Salvia bowleyana HOM05D007397 ORTHO05D009336 6.4e-42 174.9 191 57.1
Lsat_1_v5_gn_2_115220 Lactuca sativa HOM05D005234 ORTHO05D006583 1.9e-41 173.3 179 58.1
Gohir.A10G209700 Gossypium hirsutum HOM05D007397 ORTHO05D009336 2.4e-41 172.9 188 59.6
BcaB04g21083 Brassica carinata HOM05D007397 ORTHO05D009336 9.2e-41 171.0 191 55.0
BcaB04g21085 Brassica carinata HOM05D007397 ORTHO05D009336 9.2e-41 171.0 191 55.0
Nitab4.5_0007221g0040 Nicotiana tabacum HOM05D007397 ORTHO05D009336 2.1e-40 169.9 191 56.5
PSO384G5114 Papaver somniferum HOM05D007397 ORTHO05D009336 3.5e-40 169.1 195 53.8
CAN.G1557.1 Capsicum annuum HOM05D007397 ORTHO05D009336 7.8e-40 167.9 115 74.8
Atru.chr12.591 Acer truncatum HOM05D007397 ORTHO05D009336 1.3e-39 167.2 196 54.1
Sc06g0001870 Simmondsia chinensis HOM05D007397 ORTHO05D009336 1.1e-38 164.1 162 54.3
unitig_22.g6935 Utricularia gibba HOM05D007397 ORTHO05D009336 5.6e-38 161.8 183 54.1
ATR0681G332 Amborella trichopoda HOM05D007397 ORTHO05D009336 7.3e-38 161.4 176 50.0
MBI05_g30757_MAGBIO Magnolia biondii HOM05D007397 ORTHO05D009336 4.7e-37 158.7 145 60.7
Ciclev10034008m.g Citrus clementina HOM05D007397 ORTHO05D009336 1.1e-36 157.5 90 84.4
CDE02G3908 Ceratophyllum demersum HOM05D001333 ORTHO05D001208 3.1e-36 156.0 156 54.5
Duzib106G0993 Durio zibethinus HOM05D007397 ORTHO05D009336 3.1e-36 156.0 109 75.2
PSO339G5749 Papaver somniferum HOM05D007397 ORTHO05D009336 3.1e-36 156.0 192 51.0
COL.COLO4_37769 Corchorus olitorius HOM05D007397 ORTHO05D009336 2.6e-35 152.9 188 55.3
AUR62025539 Chenopodium quinoa HOM05D007397 ORTHO05D009336 1.7e-34 150.2 200 52.5
HPP92_025097 Vanilla planifolia HOM05D007397 ORTHO05D009336 9.2e-33 144.4 198 48.5
Manes.10G039600 Manihot esculenta HOM05D007397 ORTHO05D009336 1.3e-31 140.6 192 51.6
ECA238G2043 Erigeron canadensis HOM05D005234 ORTHO05D006583 3.3e-30 136.0 152 58.6
Nitab4.5_0006737g0020 Nicotiana tabacum HOM05D007397 ORTHO05D009336 2.8e-29 132.9 157 58.0
SEGI_38306 Sequoiadendron giganteum HOM05D007397 ORTHO05D009336 1.8e-28 130.2 207 44.4
Mapoly0043s0078 Marchantia polymorpha HOM05D007397 ORTHO05D009336 5.2e-28 128.6 135 48.1
Peaxi162Scf00135g00025 Petunia axillaris HOM05D007397 ORTHO05D009336 4.4e-27 125.6 196 44.4
SMO229G0021 Selaginella moellendorffii HOM05D007397 ORTHO05D009336 8.4e-26 121.3 130 48.5
Os06g0484500 Oryza sativa ssp. japonica HOM05D007397 ORTHO05D009336 8.7e-23 111.3 148 45.3
Zm00001eb397310 Zea mays HOM05D007397 ORTHO05D009336 4.7e-21 105.5 189 40.2
AagrBONN_evm.TU.Sc2ySwM_368.51 Anthoceros agrestis HOM05D007397 ORTHO05D009336 7.1e-17 91.7 73 58.9
Duzib114G0919 Durio zibethinus HOM05D007397 ORTHO05D009336 3.5e-16 89.4 135 48.1
C03p57580 Brassica napus HOM05D007397 ORTHO05D009336 1.3e-13 80.9 106 42.5
BcaC03g17725 Brassica carinata HOM05D007397 ORTHO05D009336 2.1e-13 80.1 106 43.4


User provided reference genes

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