Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa001518 Carpinus fangiana HOM05D000953 ORTHO05D028404 8.6e-60 233.4 115 100.0
Haze_17023 Corylus avellana HOM05D000953 ORTHO05D000231 2.2e-23 112.5 57 93.0
ClCG07G003160 Citrullus lanatus HOM05D000953 ORTHO05D000231 1.7e-15 86.3 51 80.4
MELO3C034253.2 Cucumis melo HOM05D000953 ORTHO05D000231 7.2e-14 80.9 51 76.5
CsaV3_5G006910 Cucumis sativus L. HOM05D000953 ORTHO05D000231 7.2e-14 80.9 51 76.5
TWI38G0174 Tripterygium wilfordii HOM05D000953 ORTHO05D000231 1.8e-12 76.3 88 48.9
Duzib114G0157 Durio zibethinus HOM05D000953 ORTHO05D000231 6.7e-12 74.3 58 69.0
Sed0013103 Sechium edule HOM05D000953 ORTHO05D000231 3.3e-11 72.0 50 72.0
Cpa.g.sc1.355 Carica papaya HOM05D000953 ORTHO05D028404 7.4e-11 70.9 57 59.6
Atru.chr12.521 Acer truncatum HOM05D000953 ORTHO05D000231 9.7e-11 70.5 53 66.0
TAR623G0867 Trochodendron aralioides HOM05D000953 ORTHO05D028404 4.8e-10 68.2 86 41.9
Sabra08G0036600 Salix brachista HOM05D000953 ORTHO05D000231 1.4e-09 66.6 56 66.1
THA.LOC104824263 Tarenaya hassleriana HOM05D000953 ORTHO05D000231 1.4e-09 66.6 56 66.1
Sed0016041 Sechium edule HOM05D000953 ORTHO05D000231 3.1e-09 65.5 52 63.5
CSS0024070 Camellia sinensis var. sinensis HOM05D000953 ORTHO05D028404 4.1e-09 65.1 46 58.7
TWI15G1051 Tripterygium wilfordii HOM05D000953 ORTHO05D000231 5.3e-09 64.7 75 50.7
FvH4_7g21532 Fragaria vesca HOM05D000953 ORTHO05D000231 6.9e-09 64.3 52 59.6
Actinidia02972 Actinidia chinensis HOM05D000953 ORTHO05D000231 9.1e-09 63.9 52 63.5
Prupe.6G084600 Prunus persica HOM05D000953 ORTHO05D000231 1.2e-08 63.5 51 54.9
COL.COLO4_14946 Corchorus olitorius HOM05D000953 ORTHO05D000231 2.0e-08 62.8 53 62.3
THA.LOC104810017 Tarenaya hassleriana HOM05D000953 ORTHO05D000231 2.0e-08 62.8 56 58.9
arahy.Tifrunner.gnm1.ann1.08RMNX Arachis hypogaea HOM05D000953 ORTHO05D000231 3.4e-08 62.0 53 60.4
arahy.Tifrunner.gnm1.ann1.0R9IFB Arachis hypogaea HOM05D000953 ORTHO05D000231 3.4e-08 62.0 53 60.4
Hma1.2p1_0573F.1_g181370 Hydrangea macrophylla HOM05D000953 ORTHO05D000231 3.4e-08 62.0 53 56.6
Nitab4.5_0009364g0020 Nicotiana tabacum HOM05D000953 ORTHO05D000231 3.4e-08 62.0 81 44.4
QL01p033302 Quercus lobata HOM05D000953 ORTHO05D000231 3.4e-08 62.0 51 58.8
Nn2g10470 Nelumbo nucifera HOM05D000953 ORTHO05D000231 4.5e-08 61.6 46 58.7
CANSAT56G3343 Cannabis sativa HOM05D000953 ORTHO05D000231 5.9e-08 61.2 43 60.5
MD11G1113800 Malus domestica HOM05D000953 ORTHO05D000231 5.9e-08 61.2 51 51.0
Rhsim03G0126800 Rhododendron simsii HOM05D000953 ORTHO05D000231 1.3e-07 60.1 51 58.8
RhsimUnG0158800 Rhododendron simsii HOM05D000953 ORTHO05D000231 1.3e-07 60.1 51 58.8
RcHm_v2.0_Chr5g0062911 Rosa chinensis HOM05D000953 ORTHO05D000231 1.3e-07 60.1 54 55.6
Haze_24033 Corylus avellana HOM05D000953 ORTHO05D000231 1.7e-07 59.7 72 51.4
MD03G1099600 Malus domestica HOM05D000953 ORTHO05D000231 1.7e-07 59.7 45 53.3
RcHm_v2.0_Chr1g0365861 Rosa chinensis HOM05D000953 ORTHO05D000231 3.8e-07 58.5 46 63.0
HPP92_015403 Vanilla planifolia HOM05D000953 ORTHO05D000231 8.5e-07 57.4 45 57.8
HPP92_026994 Vanilla planifolia HOM05D000953 ORTHO05D000231 8.5e-07 57.4 45 57.8
Aa31LG10G10360 Aethionema arabicum HOM05D000953 ORTHO05D000231 1.1e-06 57.0 79 45.6
Lalb_Chr19g0137681 Lupinus albus HOM05D000953 ORTHO05D000231 1.1e-06 57.0 54 53.7
ClCG03G001890 Citrullus lanatus HOM05D000953 ORTHO05D000231 1.4e-06 56.6 45 48.9
Nn2g12891 Nelumbo nucifera HOM05D000953 ORTHO05D000231 1.4e-06 56.6 47 51.1
FvH4_3g35001 Fragaria vesca HOM05D000953 ORTHO05D000231 1.9e-06 56.2 54 51.9
MBI14_g35851_MAGBIO Magnolia biondii HOM05D000953 ORTHO05D000231 1.9e-06 56.2 46 56.5
MELO3C035376.2 Cucumis melo HOM05D000953 ORTHO05D000231 2.5e-06 55.8 45 48.9
vmacro09150 Vaccinium macrocarpon HOM05D000953 ORTHO05D000231 2.5e-06 55.8 46 56.5
VMungo1080G0275 Vigna mungo HOM05D000953 ORTHO05D000231 3.2e-06 55.5 52 51.9
MD07G1191700 Malus domestica HOM05D000953 ORTHO05D000231 4.2e-06 55.1 64 54.7
CsaV3_1G033670 Cucumis sativus L. HOM05D000953 ORTHO05D000231 5.5e-06 54.7 45 48.9
Duzib150G0060 Durio zibethinus HOM05D000953 ORTHO05D000231 5.5e-06 54.7 51 49.0
Sed0006822 Sechium edule HOM05D000953 ORTHO05D000231 5.5e-06 54.7 53 54.7
Dinv32850 Davidia involucrata HOM05D000953 ORTHO05D000231 7.2e-06 54.3 45 55.6
Duzib170G0033 Durio zibethinus HOM05D000953 ORTHO05D000231 9.4e-06 53.9 51 45.1


User provided reference genes

Program Settings