Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa001517 Carpinus fangiana HOM05D008199 ORTHO05D010334 1.7e-23 111.7 53 100.0
CiPaw.01G282700 Carya illinoinensis HOM05D008199 ORTHO05D010334 6.4e-18 93.2 51 82.4
Sc20g0002530 Simmondsia chinensis HOM05D008199 ORTHO05D010334 5.4e-17 90.1 48 83.3
Prupe.2G230900 Prunus persica HOM05D008199 ORTHO05D010334 9.3e-17 89.4 56 78.6
PGR142G1326 Punica granatum HOM05D008199 ORTHO05D010334 2.1e-16 88.2 49 79.6
CANSAT11G0099 Cannabis sativa HOM05D008199 ORTHO05D010334 3.5e-16 87.4 49 79.6
RcHm_v2.0_Chr1g0366131 Rosa chinensis HOM05D008199 ORTHO05D010334 4.6e-16 87.0 56 75.0
Cpa.g.sc1.358 Carica papaya HOM05D008199 ORTHO05D010334 6.0e-16 86.7 55 76.4
MD01G1123400 Malus domestica HOM05D008199 ORTHO05D010334 6.0e-16 86.7 56 76.8
Sed0003138 Sechium edule HOM05D008199 ORTHO05D010334 6.0e-16 86.7 46 80.4
ClCG09G020150 Citrullus lanatus HOM05D008199 ORTHO05D010334 1.3e-15 85.5 54 75.9
Gohir.D04G061900 Gossypium hirsutum HOM05D008199 ORTHO05D010334 1.3e-15 85.5 53 73.6
Gorai.012G069200 Gossypium raimondii HOM05D008199 ORTHO05D010334 1.3e-15 85.5 53 73.6
Manes.07G111800 Manihot esculenta HOM05D008199 ORTHO05D010334 1.3e-15 85.5 54 72.2
CSS0014372 Camellia sinensis var. sinensis HOM05D008199 ORTHO05D010334 1.8e-15 85.1 49 79.6
Gohir.A05G350700 Gossypium hirsutum HOM05D008199 ORTHO05D010334 1.8e-15 85.1 53 73.6
Nn2g10469 Nelumbo nucifera HOM05D008199 ORTHO05D010334 1.8e-15 85.1 43 86.0
Glyma.20G099000 Glycine max HOM05D008199 ORTHO05D010334 2.3e-15 84.7 44 81.8
Potri.008G051100 Populus trichocarpa HOM05D008199 ORTHO05D010334 2.3e-15 84.7 51 72.5
Dinv31422 Davidia involucrata HOM05D000953 ORTHO05D000231 3.0e-15 84.3 51 72.5
GSVIVG01016602001 Vitis vinifera HOM05D000953 ORTHO05D000231 5.1e-15 83.6 44 79.5
Lj5g0016979 Lotus japonicus HOM05D008199 ORTHO05D010334 6.7e-15 83.2 49 75.5
TWI38G1458 Tripterygium wilfordii HOM05D008199 ORTHO05D010334 6.7e-15 83.2 52 73.1
PGSC0003DMG400029465 Solanum tuberosum HOM05D008199 ORTHO05D010334 1.1e-14 82.4 50 74.0
Actinidia07733 Actinidia chinensis HOM05D008199 ORTHO05D010334 1.5e-14 82.0 52 69.2
Actinidia34336 Actinidia chinensis HOM05D008199 ORTHO05D010334 1.5e-14 82.0 52 69.2
ECA238G2613 Erigeron canadensis HOM05D008199 ORTHO05D010334 1.5e-14 82.0 42 83.3
Hma1.2p1_0727F.1_g209100 Hydrangea macrophylla HOM05D008199 ORTHO05D010334 1.5e-14 82.0 43 81.4
Medtr1g115355 Medicago truncatula HOM05D008199 ORTHO05D010334 1.5e-14 82.0 42 83.3
Aqoxy5G00469 Aquilegia oxysepala HOM05D008199 ORTHO05D010334 1.9e-14 81.6 53 69.8
Actinidia02971 Actinidia chinensis HOM05D008199 ORTHO05D010334 2.5e-14 81.3 50 74.0
Phvul.007G011200 Phaseolus vulgaris HOM05D008199 ORTHO05D010334 2.5e-14 81.3 44 77.3
Psat6g236360 Pisum sativum HOM05D008199 ORTHO05D010334 2.5e-14 81.3 44 79.5
Thecc.10G048500 Theobroma cacao HOM05D008199 ORTHO05D010334 2.5e-14 81.3 41 85.4
CAN.G74.25 Capsicum annuum HOM05D008199 ORTHO05D010334 5.6e-14 80.1 42 83.3
Lsat_1_v5_gn_2_117560 Lactuca sativa HOM05D008199 ORTHO05D010334 5.6e-14 80.1 42 83.3
Aa31LG5G20100 Aethionema arabicum HOM05D008199 ORTHO05D010334 7.4e-14 79.7 51 66.7
TAR633G0052 Trochodendron aralioides HOM05D008199 ORTHO05D010334 1.3e-13 79.0 49 67.3
Oeu021440.1 Olea europaea HOM05D008199 ORTHO05D010334 1.6e-13 78.6 43 76.7
AL4G36900 Arabidopsis lyrata HOM05D008199 ORTHO05D010334 2.1e-13 78.2 48 68.8
AL4G36920 Arabidopsis lyrata HOM05D008199 ORTHO05D010334 2.1e-13 78.2 48 68.8
Migut.F01496 Erythranthe guttata HOM05D008199 ORTHO05D010334 2.1e-13 78.2 47 72.3
Manes.10G036000 Manihot esculenta HOM05D008199 ORTHO05D010334 2.1e-13 78.2 41 80.5
AT2G39500 Arabidopsis thaliana HOM05D008199 ORTHO05D010334 2.8e-13 77.8 48 66.7
BcaC02g12078 Brassica carinata HOM05D008199 ORTHO05D010334 2.8e-13 77.8 48 68.8
A05p06880 Brassica napus HOM05D008199 ORTHO05D010334 2.8e-13 77.8 48 68.8
BraA05t19653Z Brassica rapa HOM05D008199 ORTHO05D010334 2.8e-13 77.8 48 68.8
DCAR_027672 Daucus carota HOM05D008199 ORTHO05D010334 2.8e-13 77.8 44 75.0
Atru.chr12.520 Acer truncatum HOM05D008199 ORTHO05D010334 3.7e-13 77.4 41 82.9
C04p08150 Brassica napus HOM05D008199 ORTHO05D010334 4.8e-13 77.0 42 76.2
BolC4t22425H Brassica oleracea HOM05D008199 ORTHO05D010334 4.8e-13 77.0 42 76.2
Lalb_Chr02g0144051 Lupinus albus HOM05D008199 ORTHO05D010334 6.2e-13 76.6 44 72.7
PSO339G4122 Papaver somniferum HOM05D008199 ORTHO05D010334 6.2e-13 76.6 46 67.4
THA.LOC104824262 Tarenaya hassleriana HOM05D008199 ORTHO05D010334 8.1e-13 76.3 42 73.8
Ciclev10033682m.g Citrus clementina HOM05D008199 ORTHO05D010334 1.1e-12 75.9 39 84.6
COL.COLO4_14948 Corchorus olitorius HOM05D008199 ORTHO05D010334 1.1e-12 75.9 47 68.1
Carub.0004s2158 Capsella rubella HOM05D008199 ORTHO05D010334 1.8e-12 75.1 52 67.3
CARHR134390 Cardamine hirsuta HOM05D008199 ORTHO05D010334 4.0e-12 73.9 48 62.5
SEGI_29944 Sequoiadendron giganteum HOM05D008199 ORTHO05D010334 6.9e-12 73.2 58 62.1
Zm00001eb362160 Zea mays HOM05D008199 ORTHO05D010334 6.9e-12 73.2 51 56.9
Sp4g21800 Schrenkiella parvula HOM05D008199 ORTHO05D010334 9.0e-12 72.8 48 60.4
MBI05_g35603_MAGBIO Magnolia biondii HOM05D008199 ORTHO05D010334 7.6e-11 69.7 38 73.7
Duzib128G0439 Durio zibethinus HOM05D008199 ORTHO05D010334 2.9e-10 67.8 38 73.7
HanXRQChr16g0507891 Helianthus annuus HOM05D008199 ORTHO05D010334 4.6e-08 60.5 51 58.8
SHI12594 Sapria himalayana HOM05D008199 ORTHO05D010334 6.0e-08 60.1 74 39.2
Pp3c9_50 Physcomitrium patens HOM05D008199 ORTHO05D010334 1.8e-07 58.5 39 64.1
CsaV3_5G026310 Cucumis sativus L. HOM05D058401 ORTHO05D039003 2.5e-06 54.7 26 96.2


User provided reference genes

Program Settings