Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa001100 Carpinus fangiana HOM05D025659 ORTHO05D034128 6.5e-70 267.3 138 100.0
Cfa021375 Carpinus fangiana HOM05D025659 ORTHO05D034128 1.2e-39 166.8 123 78.0
Manes.14G021900 Manihot esculenta HOM05D000607 ORTHO05D000518 1.5e-10 70.1 139 34.5
Cfa013805 Carpinus fangiana HOM05D025659 ORTHO05D034128 4.4e-10 68.6 48 72.9
Manes.06G153100 Manihot esculenta HOM05D000607 ORTHO05D000518 4.4e-10 68.6 139 34.5
TWI39G0972 Tripterygium wilfordii HOM05D000607 ORTHO05D000518 5.8e-10 68.2 139 33.8
Potri.004G073000 Populus trichocarpa HOM05D000607 ORTHO05D000518 1.7e-09 66.6 137 33.6
Haze_05398 Corylus avellana HOM05D025659 ORTHO05D000518 3.7e-09 65.5 80 52.5
MBI04_g35361_MAGBIO Magnolia biondii HOM05D000607 ORTHO05D000518 1.4e-08 63.5 139 30.2
PSO782G4438 Papaver somniferum HOM05D000607 ORTHO05D000518 1.4e-08 63.5 149 34.2
Nn1g01666 Nelumbo nucifera HOM05D000607 ORTHO05D000518 1.9e-08 63.2 143 33.6
RcHm_v2.0_Chr1g0378461 Rosa chinensis HOM05D000607 ORTHO05D000518 2.4e-08 62.8 139 30.9
Ciclev10006198m.g Citrus clementina HOM05D000607 ORTHO05D000518 7.1e-08 61.2 137 33.6
Medtr8g098915 Medicago truncatula HOM05D000607 ORTHO05D000518 1.6e-07 60.1 139 30.2
MD01G1209100 Malus domestica HOM05D000607 ORTHO05D000518 2.1e-07 59.7 139 30.9
MD01G1209200 Malus domestica HOM05D000607 ORTHO05D000518 2.1e-07 59.7 139 30.9
arahy.Tifrunner.gnm1.ann1.XL28RF Arachis hypogaea HOM05D000607 ORTHO05D000518 3.5e-07 58.9 137 27.7
Atru.chr1.349 Acer truncatum HOM05D000607 ORTHO05D000518 7.8e-07 57.8 148 27.7
Potri.004G073100 Populus trichocarpa HOM05D000607 ORTHO05D000518 7.8e-07 57.8 140 32.1
CARHR000880 Cardamine hirsuta HOM05D000607 ORTHO05D000518 1.7e-06 56.6 175 30.3
PSO478G0459 Papaver somniferum HOM05D000607 ORTHO05D000518 1.7e-06 56.6 148 30.4
Eucgr.E00767 Eucalyptus grandis HOM05D000607 ORTHO05D000518 2.3e-06 56.2 138 32.6
Psat7g030320 Pisum sativum HOM05D000607 ORTHO05D000518 2.3e-06 56.2 140 30.0
Atru.ctg97_1.34 Acer truncatum HOM05D000607 ORTHO05D000518 3.9e-06 55.5 143 30.1
AT1G01490 Arabidopsis thaliana HOM05D000607 ORTHO05D000518 3.9e-06 55.5 178 29.2
Cpa.g.sc107.116 Carica papaya HOM05D000607 ORTHO05D000518 3.9e-06 55.5 140 30.7
TPR.G12746 Trifolium pratense HOM05D000607 ORTHO05D000518 3.9e-06 55.5 140 30.0
Eucgr.E00768 Eucalyptus grandis HOM05D000607 ORTHO05D000518 5.1e-06 55.1 138 31.9
Actinidia28349 Actinidia chinensis HOM05D000607 ORTHO05D000518 6.6e-06 54.7 141 31.9
AL1G10920 Arabidopsis lyrata HOM05D000607 ORTHO05D000518 6.6e-06 54.7 178 29.2
PGR042G0975 Punica granatum HOM05D000607 ORTHO05D000518 6.6e-06 54.7 180 28.9
Nn6g32425 Nelumbo nucifera HOM05D000607 ORTHO05D000518 8.6e-06 54.3 139 28.1


User provided reference genes

Program Settings