Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa000953 Carpinus fangiana HOM05D004997 ORTHO05D005921 1.4e-61 239.6 131 100.0
CiPaw.10G092400 Carya illinoinensis HOM05D004997 ORTHO05D005921 6.0e-57 224.2 131 91.6
CSS0020008 Camellia sinensis var. sinensis HOM05D004997 ORTHO05D005921 3.9e-56 221.5 131 91.6
TAR626G0896 Trochodendron aralioides HOM05D004997 ORTHO05D005921 8.6e-56 220.3 131 90.1
Dinv32261 Davidia involucrata HOM05D004997 ORTHO05D005921 1.1e-55 219.9 131 90.8
Eucgr.E02397 Eucalyptus grandis HOM05D004997 ORTHO05D005921 1.1e-55 219.9 131 90.8
Actinidia07691 Actinidia chinensis HOM05D004997 ORTHO05D005921 1.5e-55 219.5 131 90.8
CiPaw.09G124400 Carya illinoinensis HOM05D004997 ORTHO05D005921 1.9e-55 219.2 131 88.5
Potri.004G131900 Populus trichocarpa HOM05D004997 ORTHO05D005921 3.3e-55 218.4 131 90.8
CANSAT35G1260 Cannabis sativa HOM05D004997 ORTHO05D005921 4.3e-55 218.0 130 90.0
Lalb_Chr05g0222161 Lupinus albus HOM05D004997 ORTHO05D005921 5.6e-55 217.6 127 92.1
Nn4g24866 Nelumbo nucifera HOM05D004997 ORTHO05D005921 5.6e-55 217.6 131 88.5
MELO3C002717.2 Cucumis melo HOM05D004997 ORTHO05D005921 7.3e-55 217.2 131 89.3
TWI38G1166 Tripterygium wilfordii HOM05D004997 ORTHO05D005921 7.3e-55 217.2 127 92.1
Lj5g0010316 Lotus japonicus HOM05D004997 ORTHO05D005921 1.2e-54 216.5 129 89.9
PSO339G4484 Papaver somniferum HOM05D004997 ORTHO05D005921 1.6e-54 216.1 128 90.6
Phvul.002G321900 Phaseolus vulgaris HOM05D004997 ORTHO05D005921 1.6e-54 216.1 129 89.9
VMungo0251G3606 Vigna mungo HOM05D004997 ORTHO05D005921 2.1e-54 215.7 129 90.7
Lj4g0009583 Lotus japonicus HOM05D004997 ORTHO05D005921 2.8e-54 215.3 129 89.1
TWI38G0351 Tripterygium wilfordii HOM05D004997 ORTHO05D005921 2.8e-54 215.3 131 88.5
Glyma.12G006600 Glycine max HOM05D004997 ORTHO05D005921 3.6e-54 214.9 129 89.9
Solyc08g016420.3 Solanum lycopersicum HOM05D004997 ORTHO05D005921 3.6e-54 214.9 131 87.0
Sopen08g006800 Solanum pennellii HOM05D004997 ORTHO05D005921 3.6e-54 214.9 131 87.0
Gorai.011G043400 Gossypium raimondii HOM05D004997 ORTHO05D005921 4.7e-54 214.5 130 89.2
PSO384G3576 Papaver somniferum HOM05D004997 ORTHO05D005921 4.7e-54 214.5 128 89.8
Sed0005528 Sechium edule HOM05D004997 ORTHO05D005921 4.7e-54 214.5 131 89.3
Sed0006544 Sechium edule HOM05D004997 ORTHO05D005921 4.7e-54 214.5 131 87.8
Ciclev10017164m.g Citrus clementina HOM05D004997 ORTHO05D005921 6.2e-54 214.2 131 89.3
Gohir.D05G151300 Gossypium hirsutum HOM05D004997 ORTHO05D005921 6.2e-54 214.2 130 89.2
Gorai.009G155300 Gossypium raimondii HOM05D004997 ORTHO05D005921 6.2e-54 214.2 130 89.2
MD05G1284500 Malus domestica HOM05D004997 ORTHO05D005921 6.2e-54 214.2 131 88.5
THA.LOC104814295 Tarenaya hassleriana HOM05D004997 ORTHO05D005921 6.2e-54 214.2 131 87.0
Glyma.08G046600 Glycine max HOM05D004997 ORTHO05D005921 8.1e-54 213.8 129 89.1
Psat2g084800 Pisum sativum HOM05D004997 ORTHO05D005921 8.1e-54 213.8 129 89.1
SGA_v2.0_scaffold1G00167 Striga asiatica HOM05D004997 ORTHO05D005921 8.1e-54 213.8 127 89.8
Gohir.A10G040300 Gossypium hirsutum HOM05D004997 ORTHO05D005921 1.4e-53 213.0 130 88.5
FAN21G2809 Fragaria x ananassa HOM05D004997 ORTHO05D005921 2.3e-53 212.2 131 87.8
Prupe.4G079900 Prunus persica HOM05D004997 ORTHO05D005921 2.3e-53 212.2 131 87.8
THA.LOC104812669 Tarenaya hassleriana HOM05D004997 ORTHO05D005921 2.3e-53 212.2 131 86.3
FAN11G3072 Fragaria x ananassa HOM05D004997 ORTHO05D005921 3.1e-53 211.8 130 87.7
Gohir.A05G148700 Gossypium hirsutum HOM05D004997 ORTHO05D005921 3.1e-53 211.8 130 89.2
MD10G1262900 Malus domestica HOM05D004997 ORTHO05D005921 3.1e-53 211.8 131 87.0
RcHm_v2.0_Chr5g0013981 Rosa chinensis HOM05D004997 ORTHO05D005921 4.0e-53 211.5 131 87.0
Medtr5g055650 Medicago truncatula HOM05D004997 ORTHO05D005921 5.2e-53 211.1 129 87.6
Thecc.06G151500 Theobroma cacao HOM05D004997 ORTHO05D005921 5.2e-53 211.1 130 88.5
MSTRG.16239 Avicennia marina HOM05D004997 ORTHO05D005921 6.8e-53 210.7 127 88.2
CARHR029400 Cardamine hirsuta HOM05D004997 ORTHO05D005921 6.8e-53 210.7 131 85.5
ECA233G0220 Erigeron canadensis HOM05D004997 ORTHO05D005921 6.8e-53 210.7 131 88.5
FvH4_3g05660 Fragaria vesca HOM05D004997 ORTHO05D005921 8.9e-53 210.3 130 86.9
HanXRQChr11g0340951 Helianthus annuus HOM05D004997 ORTHO05D005921 8.9e-53 210.3 127 88.2
Carub.0001s2824 Capsella rubella HOM05D004997 ORTHO05D005921 2.0e-52 209.1 131 83.2
Duzib192G0549 Durio zibethinus HOM05D004997 ORTHO05D005921 2.0e-52 209.1 131 88.5
Migut.M00914 Erythranthe guttata HOM05D004997 ORTHO05D005921 2.0e-52 209.1 127 87.4
GSVIVG01021444001 Vitis vinifera HOM05D004997 ORTHO05D005921 2.0e-52 209.1 125 88.0
Gohir.D10G041200 Gossypium hirsutum HOM05D004997 ORTHO05D005921 2.6e-52 208.8 130 87.7
Sp1g25870 Schrenkiella parvula HOM05D004997 ORTHO05D005921 3.4e-52 208.4 131 84.0
MSTRG.7483 Avicennia marina HOM05D004997 ORTHO05D005921 4.4e-52 208.0 127 88.2
unitig_32.g11442 Utricularia gibba HOM05D004997 ORTHO05D005921 4.4e-52 208.0 126 88.1
Aqoxy3G00593 Aquilegia oxysepala HOM05D004997 ORTHO05D005921 7.6e-52 207.2 130 84.6
AL1G43880 Arabidopsis lyrata HOM05D004997 ORTHO05D005921 1.3e-51 206.5 131 81.7
SGA_v2.0_scaffold333G48998 Striga asiatica HOM05D004997 ORTHO05D005921 2.2e-51 205.7 140 82.1
Gorai.002G185400 Gossypium raimondii HOM05D004997 ORTHO05D005921 3.7e-51 204.9 130 86.9
AT1G29990 Arabidopsis thaliana HOM05D004997 ORTHO05D005921 6.4e-51 204.1 129 82.2
arahy.Tifrunner.gnm1.ann1.06CE9J Arachis hypogaea HOM05D004997 ORTHO05D005921 8.4e-51 203.8 135 83.7
BcaB07g32600 Brassica carinata HOM05D004997 ORTHO05D005921 1.9e-50 202.6 131 80.9
A09p36530 Brassica napus HOM05D004997 ORTHO05D005921 1.9e-50 202.6 131 80.9
BraA09t39174Z Brassica rapa HOM05D004997 ORTHO05D005921 1.9e-50 202.6 131 80.9
HanXRQChr01g0020611 Helianthus annuus HOM05D004997 ORTHO05D005921 2.4e-50 202.2 130 85.4
BcaC06g35482 Brassica carinata HOM05D004997 ORTHO05D005921 4.1e-50 201.4 130 80.8
BolC7t42045H Brassica oleracea HOM05D004997 ORTHO05D005921 4.1e-50 201.4 130 80.8
C05p28750 Brassica napus HOM05D004997 ORTHO05D005921 7.1e-50 200.7 131 80.2
BolC5t31593H Brassica oleracea HOM05D004997 ORTHO05D005921 7.1e-50 200.7 131 80.2
HPP92_006252 Vanilla planifolia HOM05D004997 ORTHO05D005921 9.2e-50 200.3 129 80.6
CDE09G0791 Ceratophyllum demersum HOM05D004997 ORTHO05D005921 1.2e-49 199.9 129 82.2
Thhalv10009093m.g Eutrema salsugineum HOM05D004997 ORTHO05D005921 1.2e-49 199.9 131 81.7
TPR.G13287 Trifolium pratense HOM05D004997 ORTHO05D005921 1.0e-48 196.8 113 92.0
CDE02G0055 Ceratophyllum demersum HOM05D004997 ORTHO05D005921 1.3e-48 196.4 129 80.6
PGR042G1500 Punica granatum HOM05D004997 ORTHO05D005921 1.3e-48 196.4 131 81.7
Manes.11G058500 Manihot esculenta HOM05D004997 ORTHO05D005921 1.7e-48 196.1 113 91.2
FAN25G0101 Fragaria x ananassa HOM05D004997 ORTHO05D005921 3.9e-48 194.9 144 76.4
ClCG03G007080 Citrullus lanatus HOM05D004997 ORTHO05D005921 5.1e-48 194.5 186 64.0
BcaB03g13847 Brassica carinata HOM05D004997 ORTHO05D005921 2.5e-47 192.2 130 79.2
Atru.chr10.1243 Acer truncatum HOM05D004997 ORTHO05D005921 1.2e-46 189.9 122 85.2
Gohir.D01G100600 Gossypium hirsutum HOM05D004997 ORTHO05D005921 4.7e-46 188.0 121 86.0
Ah.09g232610 Amaranthus hybridus HOM05D000413 ORTHO05D000292 1.4e-45 186.4 111 86.5
A07p10100 Brassica napus HOM05D004997 ORTHO05D005921 1.8e-45 186.0 134 76.9
CsaV3_1G032650 Cucumis sativus L. HOM05D004997 ORTHO05D005921 2.4e-45 185.7 113 85.8
Gorai.002G125400 Gossypium raimondii HOM05D004997 ORTHO05D005921 4.0e-45 184.9 121 84.3
Os02g0246300 Oryza sativa ssp. japonica HOM05D004997 ORTHO05D005921 6.8e-45 184.1 124 75.0
Duzib235G0692 Durio zibethinus HOM05D004997 ORTHO05D005921 1.5e-44 183.0 111 88.3
SEGI_33388 Sequoiadendron giganteum HOM05D004997 ORTHO05D005921 1.5e-44 183.0 129 75.2
Lsat_1_v5_gn_1_91801 Lactuca sativa HOM05D004997 ORTHO05D005921 2.0e-44 182.6 106 91.5
CAN.G134.135 Capsicum annuum HOM05D004997 ORTHO05D000105 5.8e-44 181.0 111 84.7
MBI07_g26358_MAGBIO Magnolia biondii HOM05D004997 ORTHO05D005921 5.8e-44 181.0 106 88.7
Hund21531 Selenicereus undatus HOM05D004997 ORTHO05D005921 7.6e-44 180.6 119 81.5
CSS0046404 Camellia sinensis var. sinensis HOM05D004997 ORTHO05D005921 1.3e-43 179.9 105 92.4
DCAR_027919 Daucus carota HOM05D000413 ORTHO05D000292 3.8e-43 178.3 124 83.1
Rhsim13G0211800 Rhododendron simsii HOM05D004997 ORTHO05D005921 3.8e-43 178.3 104 92.3
QL05p058391 Quercus lobata HOM05D004997 ORTHO05D005921 8.4e-43 177.2 129 76.7
arahy.Tifrunner.gnm1.ann1.FF119L Arachis hypogaea HOM05D004997 ORTHO05D005921 1.4e-42 176.4 116 82.8
BcaC05g27010 Brassica carinata HOM05D004997 ORTHO05D005921 1.4e-42 176.4 113 80.5
CAN.G134.136 Capsicum annuum HOM05D004997 ORTHO05D005921 1.4e-42 176.4 111 82.9
Prupe.3G104900 Prunus persica HOM05D004997 ORTHO05D005921 7.1e-42 174.1 105 88.6
ATR0743G157 Amborella trichopoda HOM05D004997 ORTHO05D005921 1.2e-41 173.3 112 81.2
BraA07t28803Z Brassica rapa HOM05D004997 ORTHO05D005921 2.3e-40 169.1 119 75.6
FAN16G0953 Fragaria x ananassa HOM05D004997 ORTHO05D005921 5.1e-40 167.9 105 83.8
Cc02_g37190 Coffea canephora HOM05D004997 ORTHO05D005921 4.3e-39 164.9 131 71.0
Pp3c22_1770 Physcomitrium patens HOM05D004997 ORTHO05D005921 1.6e-38 162.9 124 66.1
Aa31LG6G5670 Aethionema arabicum HOM05D004997 ORTHO05D005921 2.8e-38 162.2 133 69.2
Zm00001eb238610 Zea mays HOM05D004997 ORTHO05D005921 2.8e-38 162.2 124 70.2
Oeu034156.1 Olea europaea HOM05D004997 ORTHO05D005921 8.1e-38 160.6 92 92.4
AagrBONN_evm.TU.Sc2ySwM_344.2433 Anthoceros agrestis HOM05D004997 ORTHO05D005921 1.8e-37 159.5 131 62.6
PGSC0003DMG400009647 Solanum tuberosum HOM05D004997 ORTHO05D005921 1.8e-37 159.5 92 90.2
EL10Ac8g19712 Beta vulgaris HOM05D004997 ORTHO05D005921 2.4e-37 159.1 163 57.7
C07p15580 Brassica napus HOM05D004997 ORTHO05D005921 3.1e-37 158.7 119 72.3
Mapoly0006s0079 Marchantia polymorpha HOM05D004997 ORTHO05D005921 4.0e-37 158.3 125 66.4
Oeu052376.1 Olea europaea HOM05D004997 ORTHO05D005921 4.0e-37 158.3 92 90.2
vmacro04021 Vaccinium macrocarpon HOM05D004997 ORTHO05D005921 2.6e-36 155.6 87 92.0
Dinv30737 Davidia involucrata HOM05D004997 ORTHO05D005921 3.4e-36 155.2 92 90.2
COL.COLO4_31081 Corchorus olitorius HOM05D004997 ORTHO05D005921 7.6e-36 154.1 87 92.0
arahy.Tifrunner.gnm1.ann1.7IX92P Arachis hypogaea HOM05D004997 ORTHO05D005921 1.7e-35 152.9 88 89.8
SMO367G0874 Selaginella moellendorffii HOM05D004997 ORTHO05D005921 4.9e-35 151.4 109 67.9
QL06p022817 Quercus lobata HOM05D004997 ORTHO05D005921 8.4e-35 150.6 117 72.6
Sc17g0004940 Simmondsia chinensis HOM05D004997 ORTHO05D005921 8.4e-35 150.6 92 83.7
CAN.G134.137 Capsicum annuum HOM05D004997 ORTHO05D005921 1.1e-34 150.2 95 82.1
AUR62039776 Chenopodium quinoa HOM05D004997 ORTHO05D005921 3.2e-34 148.7 84 89.3
Phvul.009G128800 Phaseolus vulgaris HOM05D004997 ORTHO05D005921 3.2e-34 148.7 87 92.0
CAN.G3523.1 Capsicum annuum HOM05D004997 ORTHO05D005921 5.4e-34 147.9 92 83.7
Actinidia39569 Actinidia chinensis HOM05D004997 ORTHO05D005921 2.7e-33 145.6 131 67.2
Peaxi162Scf01211g00142 Petunia axillaris HOM05D004997 ORTHO05D005921 6.0e-33 144.4 88 87.5
Gohir.D01G149300 Gossypium hirsutum HOM05D004997 ORTHO05D005921 1.6e-30 136.3 95 81.1
SalBow8G3614 Salvia bowleyana HOM05D004997 ORTHO05D005921 4.8e-30 134.8 102 74.5
SEGI_19850 Sequoiadendron giganteum HOM05D004997 ORTHO05D005921 4.8e-30 134.8 90 78.9
Haze_05586 Corylus avellana HOM05D004997 ORTHO05D005921 1.8e-29 132.9 203 48.3
Lsat_1_v5_gn_5_30841 Lactuca sativa HOM05D004997 ORTHO05D005921 8.4e-27 124.0 71 90.1
Nitab4.5_0010327g0020 Nicotiana tabacum HOM05D004997 ORTHO05D005921 5.5e-26 121.3 92 73.9
Nitab4.5_0000348g0240 Nicotiana tabacum HOM05D004997 ORTHO05D005921 1.2e-25 120.2 92 73.9
CDE02G2003 Ceratophyllum demersum HOM05D004997 ORTHO05D005921 3.5e-25 118.6 88 73.9
Sabra04G0085700 Salix brachista HOM05D004997 ORTHO05D005921 4.3e-23 111.7 63 90.5
AUR62030207 Chenopodium quinoa HOM05D004997 ORTHO05D005921 6.2e-22 107.8 61 90.2
PRCOL_00000028 Prasinoderma coloniale HOM05D004997 ORTHO05D005921 3.1e-21 105.5 119 47.1
Manes.09G021201 Manihot esculenta HOM05D004997 ORTHO05D005921 9.0e-21 104.0 111 59.5
MCO01G210 Micromonas commoda HOM05D004997 ORTHO05D005921 2.2e-19 99.4 121 43.0
Zm00001eb258640 Zea mays HOM05D004997 ORTHO05D005921 1.4e-18 96.7 67 71.6
Zm00001eb151600 Zea mays HOM05D000394 ORTHO05D016690 4.2e-18 95.1 64 73.4
Haze_05599 Corylus avellana HOM05D004997 ORTHO05D005921 1.2e-17 93.6 173 42.8
Zm00001eb310800 Zea mays HOM05D000394 ORTHO05D016690 1.2e-17 93.6 64 71.9
Zm00001eb139040 Zea mays HOM05D000901 ORTHO05D005921 2.7e-17 92.4 78 61.5
Zm00001eb225310 Zea mays HOM05D000901 ORTHO05D005921 6.0e-17 91.3 66 69.7
Zm00001eb269380 Zea mays HOM05D000901 ORTHO05D005921 1.3e-16 90.1 65 70.8
Zm00001eb344510 Zea mays HOM05D000901 ORTHO05D000768 1.1e-15 87.0 68 64.7
Cre12.g502750 Chlamydomonas reinhardtii HOM05D004997 ORTHO05D005921 1.3e-14 83.6 114 42.1
Cfa022129 Carpinus fangiana HOM05D004997 ORTHO05D005921 2.9e-11 72.4 123 35.0
CBR_g48714 Chara braunii HOM05D004997 ORTHO05D005921 1.6e-09 66.6 124 36.3
arahy.Tifrunner.gnm1.ann1.MPJ1GQ Arachis hypogaea HOM05D004997 ORTHO05D005921 6.1e-09 64.7 51 70.6


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