Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa000938 Carpinus fangiana HOM05D007451 ORTHO05D009399 4.5e-83 311.6 209 100.0
CiPaw.10G091600 Carya illinoinensis HOM05D007451 ORTHO05D009399 2.5e-57 226.1 202 62.4
QL05p057933 Quercus lobata HOM05D007451 ORTHO05D009399 6.4e-53 211.5 220 75.5
Haze_05609 Corylus avellana HOM05D007451 ORTHO05D009399 5.1e-50 201.8 107 98.1
GSVIVG01021497001 Vitis vinifera HOM05D007451 ORTHO05D009399 8.1e-48 194.5 201 57.7
Manes.17G070400 Manihot esculenta HOM05D007451 ORTHO05D009399 5.4e-44 181.8 201 53.7
Potri.004G132600 Populus trichocarpa HOM05D007451 ORTHO05D009399 9.2e-44 181.0 201 53.7
Thecc.06G150100 Theobroma cacao HOM05D007451 ORTHO05D009399 7.8e-43 177.9 201 57.2
Ciclev10018276m.g Citrus clementina HOM05D007451 ORTHO05D009399 1.3e-42 177.2 201 61.7
Prupe.4G081100 Prunus persica HOM05D007451 ORTHO05D009399 1.3e-42 177.2 201 62.7
MD05G1283500 Malus domestica HOM05D007451 ORTHO05D009399 2.3e-42 176.4 200 64.0
TWI73G0492 Tripterygium wilfordii HOM05D007451 ORTHO05D009399 5.1e-42 175.3 201 53.2
RcHm_v2.0_Chr5g0014241 Rosa chinensis HOM05D007451 ORTHO05D009399 4.3e-41 172.2 201 52.2
TAR624G0819 Trochodendron aralioides HOM05D007451 ORTHO05D009399 4.3e-41 172.2 203 50.7
CANSAT35G1195 Cannabis sativa HOM05D007451 ORTHO05D009399 5.6e-41 171.8 202 51.0
Atru.chr10.1223 Acer truncatum HOM05D005618 ORTHO05D007278 7.3e-41 171.4 202 52.0
arahy.Tifrunner.gnm1.ann1.ZU2BT9 Arachis hypogaea HOM05D007451 ORTHO05D009399 1.3e-40 170.6 201 51.7
Gohir.D10G042000 Gossypium hirsutum HOM05D007451 ORTHO05D009399 3.6e-40 169.1 201 66.2
Gorai.011G044600 Gossypium raimondii HOM05D007451 ORTHO05D009399 3.6e-40 169.1 201 66.2
Medtr4g084470 Medicago truncatula HOM05D007451 ORTHO05D009399 4.0e-39 165.6 203 49.3
Lj1C1189G10 Lonicera japonica HOM05D007451 ORTHO05D009399 1.2e-38 164.1 201 48.8
FAN21G0862 Fragaria x ananassa HOM05D007451 ORTHO05D009399 7.6e-38 161.4 220 49.1
PSO541G4911 Papaver somniferum HOM05D007451 ORTHO05D009399 2.2e-37 159.8 200 50.5
arahy.Tifrunner.gnm1.ann1.Z8IVUX Arachis hypogaea HOM05D007451 ORTHO05D009399 4.9e-37 158.7 222 46.8
PSO675G9053 Papaver somniferum HOM05D007451 ORTHO05D009399 6.4e-37 158.3 200 49.5
Lsat_1_v5_gn_7_28421 Lactuca sativa HOM05D007451 ORTHO05D009399 1.4e-36 157.1 201 47.8
Oeu031273.1 Olea europaea HOM05D007451 ORTHO05D009399 3.2e-36 156.0 201 47.8
Psat7g130000 Pisum sativum HOM05D007451 ORTHO05D009399 5.4e-36 155.2 201 47.8
Nitab4.5_0003044g0100 Nicotiana tabacum HOM05D007451 ORTHO05D009399 2.7e-35 152.9 198 47.5
Glyma.07G220100 Glycine max HOM05D007451 ORTHO05D009399 3.5e-35 152.5 201 61.2
Actinidia07699 Actinidia chinensis HOM05D007451 ORTHO05D009399 4.6e-35 152.1 201 53.2
Gohir.A10G041200 Gossypium hirsutum HOM05D007451 ORTHO05D009399 4.6e-35 152.1 189 65.6
Phvul.002G096800 Phaseolus vulgaris HOM05D007451 ORTHO05D009399 7.8e-35 151.4 201 47.8
ECA246G3905 Erigeron canadensis HOM05D007451 ORTHO05D009399 1.7e-34 150.2 201 46.8
Lalb_Chr16g0385141 Lupinus albus HOM05D007451 ORTHO05D009399 6.6e-34 148.3 201 63.7
MBI07_g23439_MAGBIO Magnolia biondii HOM05D007451 ORTHO05D009399 1.1e-33 147.5 203 45.3
HanXRQChr04g0114281 Helianthus annuus HOM05D007451 ORTHO05D009399 4.3e-33 145.6 201 45.3
CSS0015635 Camellia sinensis var. sinensis HOM05D007451 ORTHO05D009399 7.3e-33 144.8 208 46.2
Sc17g0004890 Simmondsia chinensis HOM05D007451 ORTHO05D009399 1.3e-32 144.1 202 45.0
VMungo0251G0908 Vigna mungo HOM05D007451 ORTHO05D009399 2.8e-32 142.9 201 46.8
Rhsim02G0158600 Rhododendron simsii HOM05D007451 ORTHO05D009399 1.4e-31 140.6 222 41.4
FvH4_3g05500 Fragaria vesca HOM05D007451 ORTHO05D009399 2.4e-31 139.8 201 54.7
Aqoxy1G01697 Aquilegia oxysepala HOM05D007451 ORTHO05D009399 6.9e-31 138.3 199 43.2
CSS0045800 Camellia sinensis var. sinensis HOM05D007451 ORTHO05D009399 1.2e-30 137.5 197 44.7
FAN11G0575 Fragaria x ananassa HOM05D007451 ORTHO05D009399 3.4e-30 136.0 197 44.7
CAN.G65.121 Capsicum annuum HOM05D007451 ORTHO05D009399 2.2e-29 133.3 201 42.8
Hma1.2p1_0286F.1_g114180 Hydrangea macrophylla HOM05D007451 ORTHO05D009399 3.8e-29 132.5 205 44.9
AUR62030193 Chenopodium quinoa HOM05D007451 ORTHO05D009399 4.2e-28 129.0 201 55.2
AL4G30550 Arabidopsis lyrata HOM05D007451 ORTHO05D009399 1.2e-27 127.5 161 46.0
Nitab4.5_0003838g0080 Nicotiana tabacum HOM05D007451 ORTHO05D009399 2.7e-27 126.3 198 42.9
AUR62002733 Chenopodium quinoa HOM05D007451 ORTHO05D009399 7.9e-27 124.8 201 53.2
EL10Ac8g19670 Beta vulgaris HOM05D007451 ORTHO05D009399 1.3e-26 124.0 201 39.8
Thhalv10017344m.g Eutrema salsugineum HOM05D007451 ORTHO05D009399 1.3e-26 124.0 160 45.6
AUR62002741 Chenopodium quinoa HOM05D007451 ORTHO05D009399 1.8e-26 123.6 201 52.7
Dinv32247 Davidia involucrata HOM05D007451 ORTHO05D009399 3.0e-26 122.9 143 76.2
FAN25G1374 Fragaria x ananassa HOM05D005618 ORTHO05D007278 3.9e-26 122.5 183 49.2
Gorai.008G053800 Gossypium raimondii HOM05D007451 ORTHO05D009399 3.9e-26 122.5 188 54.3
Nn4g26566 Nelumbo nucifera HOM05D007451 ORTHO05D009399 3.9e-26 122.5 201 41.3
EL10Ac8g19669 Beta vulgaris HOM05D007451 ORTHO05D009399 5.1e-26 122.1 201 39.8
AT2G34580 Arabidopsis thaliana HOM05D007451 ORTHO05D009399 6.7e-26 121.7 160 45.0
Sp4g16840 Schrenkiella parvula HOM05D007451 ORTHO05D009399 6.7e-26 121.7 157 46.5
BcaC02g11529 Brassica carinata HOM05D007451 ORTHO05D009399 3.3e-25 119.4 161 43.5
Sabra04G0085400 Salix brachista HOM05D007451 ORTHO05D009399 4.3e-25 119.0 200 41.0
CARHR128670 Cardamine hirsuta HOM05D007451 ORTHO05D009399 7.4e-25 118.2 161 45.3
Carub.0004s1625 Capsella rubella HOM05D007451 ORTHO05D009399 2.8e-24 116.3 161 42.2
TPR.G38261 Trifolium pratense HOM05D007451 ORTHO05D009399 8.1e-24 114.8 143 49.0
BcaB02g09525 Brassica carinata HOM05D007451 ORTHO05D009399 1.4e-23 114.0 161 41.0
Glyma.20G018400 Glycine max HOM05D007451 ORTHO05D009399 6.9e-23 111.7 143 49.0
THA.LOC104814695 Tarenaya hassleriana HOM05D007451 ORTHO05D009399 1.3e-21 107.5 186 53.2
vmacro10960 Vaccinium macrocarpon HOM05D007451 ORTHO05D009399 1.7e-21 107.1 104 52.9
Lj4g0011610 Lotus japonicus HOM05D007451 ORTHO05D009399 1.9e-20 103.6 153 38.6
BraA05t20052Z Brassica rapa HOM05D007451 ORTHO05D009399 9.3e-20 101.3 189 36.0
Gohir.D12G050550 Gossypium hirsutum HOM05D007451 ORTHO05D009399 9.3e-20 101.3 144 66.0
Eucgr.E03355 Eucalyptus grandis HOM05D007451 ORTHO05D009399 2.7e-19 99.8 151 42.4
Gorai.004G185100 Gossypium raimondii HOM05D007451 ORTHO05D009399 1.8e-18 97.1 144 65.3
Cc10_g10170 Coffea canephora HOM05D007451 ORTHO05D009399 5.7e-17 92.0 148 41.2
Gohir.D12G174800 Gossypium hirsutum HOM05D007451 ORTHO05D009399 5.7e-17 92.0 130 70.8
Peaxi162Scf00443g00210 Petunia axillaris HOM05D007451 ORTHO05D009399 7.4e-17 91.7 101 51.5
BolC4t23021H Brassica oleracea HOM05D005261 ORTHO05D006180 1.8e-15 87.0 136 37.5
A05p11060 Brassica napus HOM05D005261 ORTHO05D006180 1.5e-14 84.0 135 36.3
BolC4t27857H Brassica oleracea HOM05D007451 ORTHO05D009399 1.7e-13 80.5 60 70.0
Eucgr.B02066 Eucalyptus grandis HOM05D007451 ORTHO05D009399 1.7e-13 80.5 176 35.2
Duzib192G0695 Durio zibethinus HOM05D007451 ORTHO05D009399 2.2e-13 80.1 143 54.5
Eucgr.I02284 Eucalyptus grandis HOM05D007451 ORTHO05D009399 4.2e-12 75.9 172 34.9
CDE02G3067 Ceratophyllum demersum HOM05D007451 ORTHO05D009399 7.1e-12 75.1 100 41.0
Zm00001eb204550 Zea mays HOM05D007451 ORTHO05D009399 1.2e-11 74.3 205 33.7
C04p14410 Brassica napus HOM05D007451 ORTHO05D009399 2.1e-11 73.6 134 34.3
arahy.Tifrunner.gnm1.ann1.WBAN0Y Arachis hypogaea HOM05D007451 ORTHO05D009399 1.1e-09 67.8 119 41.2
DCAR_003911 Daucus carota HOM05D007451 ORTHO05D009399 3.3e-09 66.2 107 41.1
Ah.16g109120 Amaranthus hybridus HOM05D007451 ORTHO05D009399 7.4e-09 65.1 106 41.5
Eucgr.H02213 Eucalyptus grandis HOM05D007451 ORTHO05D009399 1.6e-08 63.9 60 58.3


User provided reference genes

Program Settings