Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa000926 Carpinus fangiana HOM05D007074 ORTHO05D008542 2.6e-97 359.8 377 100.0
Haze_05622 Corylus avellana HOM05D007074 ORTHO05D008542 1.2e-62 244.6 142 93.0
QL05p057294 Quercus lobata HOM05D007074 ORTHO05D008542 7.3e-23 112.5 136 55.9
Cfa000927 Carpinus fangiana HOM05D007074 ORTHO05D008542 8.9e-21 105.5 98 67.3
FAN21G0051 Fragaria x ananassa HOM05D007074 ORTHO05D008542 5.2e-13 79.7 128 46.1
Thecc.06G148300 Theobroma cacao HOM05D007074 ORTHO05D008542 5.2e-13 79.7 146 39.7
FAN25G3808 Fragaria x ananassa HOM05D007074 ORTHO05D008542 1.5e-12 78.2 128 46.9
FAN16G0984 Fragaria x ananassa HOM05D007074 ORTHO05D008542 2.6e-12 77.4 128 46.1
MD10G1260500 Malus domestica HOM05D007074 ORTHO05D008542 4.4e-12 76.6 108 50.0
Prupe.4G082900 Prunus persica HOM05D007074 ORTHO05D008542 9.9e-12 75.5 127 47.2
TWI53G1156 Tripterygium wilfordii HOM05D007074 ORTHO05D008542 6.4e-11 72.8 97 53.6
FAN11G3402 Fragaria x ananassa HOM05D007074 ORTHO05D008542 8.4e-11 72.4 129 43.4
MD05G1281700 Malus domestica HOM05D007074 ORTHO05D008542 7.1e-10 69.3 124 41.9
Potri.011G083600 Populus trichocarpa HOM05D007074 ORTHO05D008542 7.1e-10 69.3 124 46.8
MELO3C002739.2 Cucumis melo HOM05D007074 ORTHO05D008542 4.6e-09 66.6 123 37.4
COL.COLO4_31042 Corchorus olitorius HOM05D007074 ORTHO05D008542 7.8e-09 65.9 114 46.5
Duzib235G1065 Durio zibethinus HOM05D007074 ORTHO05D008542 7.8e-09 65.9 76 52.6
Potri.004G065300 Populus trichocarpa HOM05D007074 ORTHO05D008542 7.8e-09 65.9 138 39.9
TWI73G0984 Tripterygium wilfordii HOM05D007074 ORTHO05D008542 7.8e-09 65.9 109 45.9
CiPaw.10G090600 Carya illinoinensis HOM05D007074 ORTHO05D008542 1.3e-08 65.1 135 41.5
Manes.17G071900 Manihot esculenta HOM05D007074 ORTHO05D008542 1.3e-08 65.1 96 45.8
CiPaw.09G122000 Carya illinoinensis HOM05D007074 ORTHO05D008542 3.9e-08 63.5 119 46.2
Nn3g20397 Nelumbo nucifera HOM05D007074 ORTHO05D008542 3.9e-08 63.5 114 42.1
Ca_00533_v3 Cicer arietinum L. HOM05D007074 ORTHO05D008542 5.1e-08 63.2 126 40.5
CsaV3_1G032390 Cucumis sativus L. HOM05D007074 ORTHO05D008542 6.6e-08 62.8 124 37.9
Lalb_Chr18g0055351 Lupinus albus HOM05D007074 ORTHO05D008542 8.6e-08 62.4 76 51.3
Medtr2g019160 Medicago truncatula HOM05D007074 ORTHO05D008542 8.6e-08 62.4 156 35.3
Psat1g191080 Pisum sativum HOM05D007074 ORTHO05D008542 1.1e-07 62.0 141 34.0
FvH4_3g05300 Fragaria vesca HOM05D007074 ORTHO05D008542 2.5e-07 60.8 112 43.8
Lj6g0018330 Lotus japonicus HOM05D007074 ORTHO05D008542 2.5e-07 60.8 142 33.8
Sed0013579 Sechium edule HOM05D007074 ORTHO05D008542 2.5e-07 60.8 77 49.4
arahy.Tifrunner.gnm1.ann1.0G1Q0G Arachis hypogaea HOM05D007074 ORTHO05D008542 3.3e-07 60.5 78 53.8
ClCG03G006720 Citrullus lanatus HOM05D035155 ORTHO05D008542 3.3e-07 60.5 76 46.1
ClCG03G006810 Citrullus lanatus HOM05D007074 ORTHO05D008542 3.3e-07 60.5 112 42.9
Gohir.A05G147500 Gossypium hirsutum HOM05D007074 ORTHO05D008542 3.3e-07 60.5 78 51.3
Manes.15G123200 Manihot esculenta HOM05D007074 ORTHO05D008542 4.3e-07 60.1 141 36.9
Psat1g191160 Pisum sativum HOM05D007074 ORTHO05D008542 4.3e-07 60.1 139 33.8
Ciclev10017572m.g Citrus clementina HOM05D007074 ORTHO05D008542 7.3e-07 59.3 158 37.3
Gohir.D05G150000 Gossypium hirsutum HOM05D007074 ORTHO05D008542 1.2e-06 58.5 94 46.8
Gorai.009G154100 Gossypium raimondii HOM05D007074 ORTHO05D008542 1.6e-06 58.2 94 46.8
CsaV3_1G032290 Cucumis sativus L. HOM05D035155 ORTHO05D008542 2.1e-06 57.8 75 46.7
Lalb_Chr20g0117821 Lupinus albus HOM05D007074 ORTHO05D008542 2.8e-06 57.4 89 43.8
TPR.G26250 Trifolium pratense HOM05D007074 ORTHO05D008542 4.7e-06 56.6 142 33.1
Hma1.2p1_0020F.1_g014170 Hydrangea macrophylla HOM05D007074 ORTHO05D008542 8.1e-06 55.8 124 36.3


User provided reference genes

Program Settings