Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa000925 Carpinus fangiana HOM05D007268 ORTHO05D009152 2.8e-58 228.4 115 100.0
Gohir.A10G042300 Gossypium hirsutum HOM05D007268 ORTHO05D009152 1.5e-48 196.1 113 83.2
CiPaw.09G121900 Carya illinoinensis HOM05D007268 ORTHO05D009152 2.0e-48 195.7 111 86.5
QL05p055849 Quercus lobata HOM05D007268 ORTHO05D009152 2.6e-48 195.3 112 85.7
Gorai.011G045800 Gossypium raimondii HOM05D007268 ORTHO05D009152 5.8e-48 194.1 111 82.9
Duzib235G0597 Durio zibethinus HOM05D007268 ORTHO05D009152 7.6e-48 193.7 113 84.1
Duzib160G0929 Durio zibethinus HOM05D007268 ORTHO05D009152 1.3e-47 193.0 113 84.1
Gohir.D10G043200 Gossypium hirsutum HOM05D007268 ORTHO05D009152 1.7e-47 192.6 111 82.0
Manes.17G072200 Manihot esculenta HOM05D007268 ORTHO05D009152 6.4e-47 190.7 113 85.0
Thecc.06G148000 Theobroma cacao HOM05D007268 ORTHO05D009152 9.3e-46 186.8 113 81.4
CiPaw.10G090400 Carya illinoinensis HOM05D007268 ORTHO05D009152 3.5e-45 184.9 113 83.2
RcHm_v2.0_Chr5g0014441 Rosa chinensis HOM05D007268 ORTHO05D009152 1.0e-44 183.3 122 76.2
CSS0021934 Camellia sinensis var. sinensis HOM05D007268 ORTHO05D009152 8.7e-44 180.3 114 78.1
Eucgr.E02425 Eucalyptus grandis HOM05D007268 ORTHO05D009152 1.9e-43 179.1 113 79.6
FvH4_3g05282 Fragaria vesca HOM05D007268 ORTHO05D009152 1.9e-43 179.1 123 74.0
Ciclev10017240m.g Citrus clementina HOM05D007268 ORTHO05D009152 3.3e-43 178.3 112 76.8
CSS0030281 Camellia sinensis var. sinensis HOM05D007268 ORTHO05D009152 4.3e-43 177.9 114 76.3
TWI53G0467 Tripterygium wilfordii HOM05D007268 ORTHO05D009152 5.6e-43 177.6 112 78.6
MD05G1281500 Malus domestica HOM05D007268 ORTHO05D009152 1.3e-42 176.4 110 80.0
Actinidia32339 Actinidia chinensis HOM05D007268 ORTHO05D009152 3.6e-42 174.9 114 77.2
Psat1g188600 Pisum sativum HOM05D007268 ORTHO05D009152 3.6e-42 174.9 113 77.9
Prupe.4G083100 Prunus persica HOM05D007268 ORTHO05D009152 3.6e-42 174.9 113 78.8
Atru.chr10.1171 Acer truncatum HOM05D007268 ORTHO05D009152 8.1e-42 173.7 112 75.9
Sed0026056 Sechium edule HOM05D007268 ORTHO05D009152 1.1e-41 173.3 113 75.2
Ca_00530_v3 Cicer arietinum L. HOM05D007268 ORTHO05D009152 1.4e-41 172.9 111 81.1
THA.LOC104798395 Tarenaya hassleriana HOM05D007268 ORTHO05D009152 1.4e-41 172.9 113 77.0
Dinv32234 Davidia involucrata HOM05D007268 ORTHO05D009152 1.8e-41 172.6 114 75.4
FAN25G0109 Fragaria x ananassa HOM05D007268 ORTHO05D009152 1.8e-41 172.6 123 70.7
Potri.015G138100 Populus trichocarpa HOM05D007268 ORTHO05D009152 2.4e-41 172.2 100 81.0
MBI02_g20985_MAGBIO Magnolia biondii HOM05D007268 ORTHO05D009152 4.0e-41 171.4 102 80.4
Medtr2g019100 Medicago truncatula HOM05D007268 ORTHO05D009152 6.9e-41 170.6 113 77.0
TPR.G26254 Trifolium pratense HOM05D007268 ORTHO05D009152 6.9e-41 170.6 113 77.9
Thhalv10026609m.g Eutrema salsugineum HOM05D007268 ORTHO05D009152 9.0e-41 170.2 113 76.1
Sp7g15690 Schrenkiella parvula HOM05D007268 ORTHO05D009152 1.2e-40 169.9 113 76.1
Sabra15G0149200 Salix brachista HOM05D007268 ORTHO05D009152 1.5e-40 169.5 112 76.8
Aqoxy4G02868 Aquilegia oxysepala HOM05D007268 ORTHO05D009152 2.0e-40 169.1 102 77.5
AL7G36000 Arabidopsis lyrata HOM05D007268 ORTHO05D009152 2.6e-40 168.7 113 75.2
BcaC06g30594 Brassica carinata HOM05D007268 ORTHO05D009152 2.6e-40 168.7 112 74.1
BcaNung00009 Brassica carinata HOM05D007268 ORTHO05D009152 2.6e-40 168.7 112 74.1
CARHR225150 Cardamine hirsuta HOM05D007268 ORTHO05D009152 3.4e-40 168.3 112 73.2
CsaV3_1G004630 Cucumis sativus L. HOM05D007268 ORTHO05D009152 4.5e-40 167.9 113 75.2
AT4G18372 Arabidopsis thaliana HOM05D007268 ORTHO05D009152 5.8e-40 167.5 113 73.5
Atru.chr4.1816 Acer truncatum HOM05D007268 ORTHO05D009152 7.6e-40 167.2 112 74.1
Nn3g20236 Nelumbo nucifera HOM05D007268 ORTHO05D009152 9.9e-40 166.8 112 75.0
PGR031G1097 Punica granatum HOM05D007268 ORTHO05D009152 9.9e-40 166.8 112 75.0
BcaC06g30591 Brassica carinata HOM05D007268 ORTHO05D009152 2.2e-39 165.6 114 69.3
Carub.0007s2291 Capsella rubella HOM05D007268 ORTHO05D009152 2.9e-39 165.2 112 73.2
ClCG03G006700 Citrullus lanatus HOM05D007268 ORTHO05D009152 2.9e-39 165.2 113 74.3
BcaNung02699 Brassica carinata HOM05D007268 ORTHO05D009152 3.8e-39 164.9 114 73.7
C07p49660 Brassica napus HOM05D007268 ORTHO05D009152 3.8e-39 164.9 114 73.7
BolC7t45467H Brassica oleracea HOM05D007268 ORTHO05D009152 3.8e-39 164.9 114 73.7
BcaC09g51527 Brassica carinata HOM05D007268 ORTHO05D009152 1.1e-38 163.3 103 76.7
A01p10290 Brassica napus HOM05D007268 ORTHO05D009152 1.9e-38 162.5 114 70.2
BraA01t00976Z Brassica rapa HOM05D007268 ORTHO05D009152 1.9e-38 162.5 114 70.2
A03p51230 Brassica napus HOM05D007268 ORTHO05D009152 2.4e-38 162.2 114 67.5
BraA03t14206Z Brassica rapa HOM05D007268 ORTHO05D009152 2.4e-38 162.2 112 70.5
Aa31LG6G1080 Aethionema arabicum HOM05D007268 ORTHO05D009152 3.2e-38 161.8 115 69.6
Glyma.13G219500 Glycine max HOM05D007268 ORTHO05D009152 3.2e-38 161.8 91 83.5
Lalb_Chr18g0055321 Lupinus albus HOM05D007268 ORTHO05D009152 4.2e-38 161.4 99 77.8
Rhsim13G0115400 Rhododendron simsii HOM05D007268 ORTHO05D009152 4.2e-38 161.4 114 70.2
vmacro03337 Vaccinium macrocarpon HOM05D007268 ORTHO05D009152 5.5e-38 161.0 114 70.2
C01p12240 Brassica napus HOM05D007268 ORTHO05D009152 7.1e-38 160.6 103 75.7
BolC1t01200H Brassica oleracea HOM05D007268 ORTHO05D009152 7.1e-38 160.6 103 75.7
Solyc08g048540.2 Solanum lycopersicum HOM05D007268 ORTHO05D009152 7.1e-38 160.6 110 71.8
Sopen08g010950 Solanum pennellii HOM05D007268 ORTHO05D009152 7.1e-38 160.6 110 71.8
Hund21552 Selenicereus undatus HOM05D007268 ORTHO05D009152 2.7e-37 158.7 106 68.9
Oeu030940.1 Olea europaea HOM05D007268 ORTHO05D009152 3.5e-37 158.3 114 68.4
CAN.G42.16 Capsicum annuum HOM05D007268 ORTHO05D009152 7.9e-37 157.1 110 68.2
PGSC0003DMG400029871 Solanum tuberosum HOM05D007268 ORTHO05D009152 1.3e-36 156.4 110 70.0
CANSAT21G2169 Cannabis sativa HOM05D007268 ORTHO05D009152 5.1e-36 154.5 113 69.0
Phvul.006G166200 Phaseolus vulgaris HOM05D007268 ORTHO05D009152 5.1e-36 154.5 110 70.9
Sc24g0001710 Simmondsia chinensis HOM05D007268 ORTHO05D009152 6.7e-36 154.1 116 66.4
AUR62006739 Chenopodium quinoa HOM05D007268 ORTHO05D009152 1.5e-35 152.9 116 66.4
CAN.G500.67 Capsicum annuum HOM05D007268 ORTHO05D009152 1.9e-35 152.5 107 70.1
FAN16G0810 Fragaria x ananassa HOM05D007268 ORTHO05D009152 3.3e-35 151.8 107 72.0
SGA_v2.0_scaffold1G00193 Striga asiatica HOM05D007268 ORTHO05D009152 3.3e-35 151.8 100 70.0
Ah.04g158630 Amaranthus hybridus HOM05D007268 ORTHO05D009152 4.3e-35 151.4 116 64.7
DCAR_003898 Daucus carota HOM05D007268 ORTHO05D009152 5.6e-35 151.0 114 63.2
GSVIVG01035542001 Vitis vinifera HOM05D007268 ORTHO05D009152 2.8e-34 148.7 76 89.5
Lsat_1_v5_gn_7_27661 Lactuca sativa HOM05D007268 ORTHO05D009152 6.2e-34 147.5 109 65.1
MSTRG.7499 Avicennia marina HOM05D007268 ORTHO05D009152 8.1e-34 147.1 109 64.2
MBI02_g43299_MAGBIO Magnolia biondii HOM05D007268 ORTHO05D009152 1.1e-33 146.7 73 91.8
PSO541G1787 Papaver somniferum HOM05D007268 ORTHO05D009152 1.1e-33 146.7 113 68.1
Migut.M00895 Erythranthe guttata HOM05D007268 ORTHO05D009152 3.1e-33 145.2 115 62.6
FAN21G3321 Fragaria x ananassa HOM05D007268 ORTHO05D009152 6.9e-33 144.1 101 72.3
unitig_92.g28163 Utricularia gibba HOM05D007268 ORTHO05D009152 1.5e-32 142.9 114 58.8
ATR0618G449 Amborella trichopoda HOM05D007268 ORTHO05D009152 7.6e-32 140.6 109 64.2
ECA236G4633 Erigeron canadensis HOM05D007268 ORTHO05D009152 1.0e-31 140.2 110 62.7
SalBow8G1886 Salvia bowleyana HOM05D007268 ORTHO05D009152 2.2e-31 139.0 76 82.9
unitig_37.g12097 Utricularia gibba HOM05D007268 ORTHO05D009152 2.2e-31 139.0 114 58.8
Zm00001eb273860 Zea mays HOM05D007268 ORTHO05D009152 3.8e-31 138.3 90 71.1
HanXRQChr04g0115721 Helianthus annuus HOM05D007268 ORTHO05D009152 1.4e-30 136.3 76 81.6
Solyc08g048520.1 Solanum lycopersicum HOM05D007268 ORTHO05D009152 5.5e-30 134.4 89 71.9
Os06g0677600 Oryza sativa ssp. japonica HOM05D007268 ORTHO05D009152 9.3e-30 133.7 111 61.3
Zm00001eb224700 Zea mays HOM05D007268 ORTHO05D009152 9.3e-30 133.7 90 67.8
arahy.Tifrunner.gnm1.ann1.H0S66A Arachis hypogaea HOM05D007268 ORTHO05D009152 6.0e-29 131.0 86 75.6
EL10Ac4g09469 Beta vulgaris HOM05D007268 ORTHO05D009152 1.3e-28 129.8 77 76.6
Cc09_g08780 Coffea canephora HOM05D007268 ORTHO05D009152 1.3e-28 129.8 77 80.5
HPP92_004157 Vanilla planifolia HOM05D007268 ORTHO05D009152 1.8e-28 129.4 104 62.5
Pp3c2_29020 Physcomitrium patens HOM05D007268 ORTHO05D009152 3.4e-24 115.2 102 51.0
Mapoly0012s0147 Marchantia polymorpha HOM05D007268 ORTHO05D009152 6.5e-23 110.9 104 51.9
SEGI_36221 Sequoiadendron giganteum HOM05D007268 ORTHO05D009152 1.9e-22 109.4 122 49.2
SMO358G0115 Selaginella moellendorffii HOM05D007268 ORTHO05D009152 3.9e-20 101.7 87 55.2
SHI24845 Sapria himalayana HOM05D007268 ORTHO05D009152 2.2e-18 95.9 77 57.1
Nitab4.5_0005488g0010 Nicotiana tabacum HOM05D007268 ORTHO05D009152 1.8e-17 92.8 55 78.2
CBR_g29441 Chara braunii HOM05D007268 ORTHO05D009152 2.5e-14 82.4 111 38.7
PRCOL_00005812 Prasinoderma coloniale HOM05D007268 ORTHO05D009152 5.7e-11 71.2 89 44.9
QL05p056380 Quercus lobata HOM05D005741 ORTHO05D007240 2.6e-08 62.4 37 81.1


User provided reference genes

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